BLASTX nr result
ID: Zingiber24_contig00017340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00017340
(1446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28783.3| unnamed protein product [Vitis vinifera] 593 e-167
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 593 e-167
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca... 592 e-166
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 583 e-164
gb|AFW61219.1| DNA topoisomerase I [Zea mays] 581 e-163
gb|ACL52396.1| unknown [Zea mays] 581 e-163
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 580 e-163
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform ... 578 e-162
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S... 578 e-162
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A... 578 e-162
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 577 e-162
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 577 e-162
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 575 e-161
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b... 574 e-161
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 574 e-161
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr... 573 e-161
gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus pe... 573 e-161
ref|XP_006591998.1| PREDICTED: DNA topoisomerase 1-like [Glycine... 572 e-160
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 571 e-160
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g... 571 e-160
>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 593 bits (1529), Expect = e-167
Identities = 297/374 (79%), Positives = 318/374 (85%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI
Sbjct: 358 IPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 417
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
QNIR YT+DF +KD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LV
Sbjct: 418 QNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALV 477
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN L+FDFLGKDSIRY NTVEVE VYKAIG F+ K TSKL
Sbjct: 478 PPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLD-------TSKL 530
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD +LN+E + G EKI +YQHANKEVAIICNHQR
Sbjct: 531 NAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQR 590
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSH+ QMS+L+EK+ +L DEL DL+RAKKGKPPLKD +GKPKKN+ PEV+E+K
Sbjct: 591 SVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERK 650
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
IAQ + KI KME D + KEDLKTVALGTSKINYLDPRISVAWCKR EVPIEKIFNKSLLA
Sbjct: 651 IAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLA 710
Query: 364 KFAWAMDVDPDFRF 323
KFAWAMDVDP FRF
Sbjct: 711 KFAWAMDVDPSFRF 724
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 593 bits (1529), Expect = e-167
Identities = 297/374 (79%), Positives = 318/374 (85%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI
Sbjct: 517 IPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 576
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
QNIR YT+DF +KD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LV
Sbjct: 577 QNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALV 636
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN L+FDFLGKDSIRY NTVEVE VYKAIG F+ K TSKL
Sbjct: 637 PPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLD-------TSKL 689
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD +LN+E + G EKI +YQHANKEVAIICNHQR
Sbjct: 690 NAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQR 749
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSH+ QMS+L+EK+ +L DEL DL+RAKKGKPPLKD +GKPKKN+ PEV+E+K
Sbjct: 750 SVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERK 809
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
IAQ + KI KME D + KEDLKTVALGTSKINYLDPRISVAWCKR EVPIEKIFNKSLLA
Sbjct: 810 IAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLA 869
Query: 364 KFAWAMDVDPDFRF 323
KFAWAMDVDP FRF
Sbjct: 870 KFAWAMDVDPSFRF 883
>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao]
Length = 904
Score = 592 bits (1525), Expect = e-166
Identities = 296/374 (79%), Positives = 318/374 (85%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYI
Sbjct: 538 IPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYI 597
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
+NIR YT+DF +KD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +
Sbjct: 598 KNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECI 657
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN LKFDFLGKDSI+Y+NTVEVE VYKAIG FQ K + TSKL
Sbjct: 658 PPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLD-------TSKL 710
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD +LNKETKDG V EK+ VYQ ANKEVAIICNHQR
Sbjct: 711 NAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQR 770
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
S+SKSH QMS+L EKI +L EL +DL RAKKGKPPLKD +GK K+NL P+ I+KK
Sbjct: 771 SISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTPQAIQKK 830
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
I Q +AKI KME D Q KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 831 IDQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 890
Query: 364 KFAWAMDVDPDFRF 323
KFAWAMDVDPDFRF
Sbjct: 891 KFAWAMDVDPDFRF 904
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 583 bits (1502), Expect = e-164
Identities = 296/376 (78%), Positives = 321/376 (85%), Gaps = 2/376 (0%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
+PGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEKARLLKDYI
Sbjct: 542 VPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYI 601
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
Q IR YT+DF SKDPTK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVE V
Sbjct: 602 QGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPV 661
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN+LKFDFLGKDSIRY N VEVE V+KAI F+ K+ + DTSKL
Sbjct: 662 PPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGS-------SDLFDLLDTSKL 714
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD +L++ETK G V EK+ VYQHANKEVAIICNHQR
Sbjct: 715 NAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQR 774
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDK--EGKPKKNLAPEVIE 551
+VSKSH QM +LNEKI +L + +EL DLSR KKGKPPLK K +GKPK+NL PE +E
Sbjct: 775 TVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLE 834
Query: 550 KKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSL 371
KKIAQ +AKI KME DK+ KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSL
Sbjct: 835 KKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL 894
Query: 370 LAKFAWAMDVDPDFRF 323
LAKF WAMDVDP FRF
Sbjct: 895 LAKFTWAMDVDPSFRF 910
>gb|AFW61219.1| DNA topoisomerase I [Zea mays]
Length = 602
Score = 581 bits (1497), Expect = e-163
Identities = 289/374 (77%), Positives = 323/374 (86%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEK+R LK +I
Sbjct: 236 IPGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKSRKLKGHI 295
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
Q IR NYT+DF +KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV+NV +
Sbjct: 296 QRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTCM 355
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN ++FDFLGKDSIRY NTVEVE VYKAI F+ KK TS+L
Sbjct: 356 PPNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGQDLFDKID-------TSRL 408
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD IL++ET+DG+V EKI VYQ ANKEVAIICNHQR
Sbjct: 409 NAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVAIICNHQR 468
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSHE+QM+++NEKI++L SQ +EL DL++AKKGKP D EGKPK+NLAPE I+KK
Sbjct: 469 SVSKSHESQMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLAPEAIQKK 528
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
+A ++ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 529 VATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 588
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDP+FRF
Sbjct: 589 KFVWAMDVDPEFRF 602
>gb|ACL52396.1| unknown [Zea mays]
Length = 574
Score = 581 bits (1497), Expect = e-163
Identities = 289/374 (77%), Positives = 323/374 (86%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEK+R LK +I
Sbjct: 208 IPGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKSRKLKGHI 267
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
Q IR NYT+DF +KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV+NV +
Sbjct: 268 QRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTCM 327
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN ++FDFLGKDSIRY NTVEVE VYKAI F+ KK TS+L
Sbjct: 328 PPNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGQDLFDKID-------TSRL 380
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD IL++ET+DG+V EKI VYQ ANKEVAIICNHQR
Sbjct: 381 NAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVAIICNHQR 440
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSHE+QM+++NEKI++L SQ +EL DL++AKKGKP D EGKPK+NLAPE I+KK
Sbjct: 441 SVSKSHESQMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLAPEAIQKK 500
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
+A ++ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 501 VATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 560
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDP+FRF
Sbjct: 561 KFVWAMDVDPEFRF 574
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 580 bits (1496), Expect = e-163
Identities = 291/374 (77%), Positives = 319/374 (85%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEV+HDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYI
Sbjct: 523 IPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYI 582
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
+NIR YT+DF SKDPT+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ V
Sbjct: 583 KNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAV 642
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN+L+F+FLGKDSIRY NTVEVE V+KAI FQ K TSKL
Sbjct: 643 PPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLD-------TSKL 695
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD +LN+ TK+G V EKI YQHANKEVAIICNHQR
Sbjct: 696 NAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQR 755
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
+VSKSH QM++LNEKI++L EL +DL RAKKGKPPLK +GK K+NL PE +EKK
Sbjct: 756 TVSKSHGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKK 815
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
I+Q +AKI K+E D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 816 ISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 875
Query: 364 KFAWAMDVDPDFRF 323
KFAWAMDVDPDFRF
Sbjct: 876 KFAWAMDVDPDFRF 889
>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Setaria italica]
Length = 903
Score = 578 bits (1491), Expect = e-162
Identities = 289/374 (77%), Positives = 324/374 (86%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEK+R LK YI
Sbjct: 537 IPGERWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSRKLKGYI 596
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
Q+IR NYT+DF SKD KRQIAVATYLIDKLALRAGNEKD+DEADTVGCCTLKV+NV +
Sbjct: 597 QDIRDNYTKDFRSKDVAKRQIAVATYLIDKLALRAGNEKDEDEADTVGCCTLKVDNVTCL 656
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN ++FDFLGKDSIRY NTVEVE VYKAI F+ KK T++L
Sbjct: 657 PPNKIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGKDLFDQLD-------TTRL 709
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVAIICNHQR
Sbjct: 710 NAHLKDLMPGLTAKVFRTYNASITLDGILHKETEDGTLLEKIAVYQRANKEVAIICNHQR 769
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSHE+QM++LNE+I+DL +QRDEL +DLS+AKKGKP DKEGK K+NLAP+ IEKK
Sbjct: 770 SVSKSHESQMTRLNERIDDLKAQRDELKVDLSKAKKGKPLGYDKEGKQKRNLAPDAIEKK 829
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
IA ++ KI KMEM+K+ KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSL+A
Sbjct: 830 IAAIETKIEKMEMEKKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLVA 889
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDP+FRF
Sbjct: 890 KFGWAMDVDPEFRF 903
>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
gi|241940222|gb|EES13367.1| hypothetical protein
SORBIDRAFT_07g003610 [Sorghum bicolor]
Length = 921
Score = 578 bits (1489), Expect = e-162
Identities = 290/374 (77%), Positives = 321/374 (85%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKE+KHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEK+R LK +I
Sbjct: 555 IPGESWKEIKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSRKLKGHI 614
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
Q IR NYT+DF +KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV+NV +
Sbjct: 615 QRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTCM 674
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN ++FDFLGKDSIRY NTVEVE VYKAI F+ KK T++L
Sbjct: 675 PPNKIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGEGLFDKID-------TTRL 727
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD IL++ET+DG++ EKI VYQ ANKEVAIICNHQR
Sbjct: 728 NAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTLLEKIAVYQRANKEVAIICNHQR 787
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSHE+QM KLNEKI++L SQ +EL DLS+AKKGKP DKEGK K+NLAPE IEKK
Sbjct: 788 SVSKSHESQMIKLNEKIDELKSQMEELKADLSKAKKGKPLGYDKEGKQKRNLAPEAIEKK 847
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
IA V+ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSL+A
Sbjct: 848 IAMVEGKIDKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIA 907
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDPDFRF
Sbjct: 908 KFGWAMDVDPDFRF 921
>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
topoisomerase I [Zea mays]
Length = 904
Score = 578 bits (1489), Expect = e-162
Identities = 288/374 (77%), Positives = 322/374 (86%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEK+R LK +I
Sbjct: 538 IPGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKSRKLKGHI 597
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
Q IR NYT+DF +KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV+NV +
Sbjct: 598 QRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTCM 657
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN ++FDFLGKDSIRY NTVEVE VYKAI F+ KK TS+L
Sbjct: 658 PPNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGQDLFDKID-------TSRL 710
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD IL++ET+DG+V EKI VYQ ANKEVAIICN QR
Sbjct: 711 NAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVAIICNQQR 770
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSHE+QM+++NEKI++L SQ +EL DL++AKKGKP D EGKPK+NLAPE I+KK
Sbjct: 771 SVSKSHESQMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLAPEAIQKK 830
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
+A ++ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 831 VATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 890
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDP+FRF
Sbjct: 891 KFVWAMDVDPEFRF 904
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 577 bits (1486), Expect = e-162
Identities = 293/374 (78%), Positives = 312/374 (83%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYI
Sbjct: 511 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYI 570
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
NIR YT+DF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +
Sbjct: 571 HNIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECI 630
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN LKFDFLGKDSIRY NTVEVE VYKAIG FQ+AKK TSKL
Sbjct: 631 PPNKLKFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQTDDLFDSLD-------TSKL 683
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD L +ET+DG V EKI +Y ANK+VAIICNHQR
Sbjct: 684 NAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAIICNHQR 743
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
++SKSH+ QMS+L EKI +L S EL DL RAKKGKPPLK +GK K++L PE IEKK
Sbjct: 744 TISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGKQKRSLTPEAIEKK 803
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
IA + KI KMEM + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPI+KIFNKSLLA
Sbjct: 804 IATTNQKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKIFNKSLLA 863
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDP FRF
Sbjct: 864 KFTWAMDVDPQFRF 877
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 577 bits (1486), Expect = e-162
Identities = 290/375 (77%), Positives = 321/375 (85%), Gaps = 1/375 (0%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEV++DNTVTWLAFW DPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI
Sbjct: 560 IPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYI 619
Query: 1264 QNIRRNYTRDF-NSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEL 1088
IR YT+DF N+KDP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVE
Sbjct: 620 HGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP 679
Query: 1087 VPPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSK 908
VPPN+LKFDFLGKDSIRY N V+VEP V+KAI F+ K+ + TSK
Sbjct: 680 VPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLD-------TSK 732
Query: 907 LNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQ 728
LNAHLKELMPGLTAKVFRTYNASITLD +L+KETK G V EK+ VYQHANKEVAIICNHQ
Sbjct: 733 LNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKEVAIICNHQ 792
Query: 727 RSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEK 548
R+VSKSH QMS+LNEKI++L + +EL DLSR KKGKPP K +GKPK+NL PE +E+
Sbjct: 793 RTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRNLNPEALER 852
Query: 547 KIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLL 368
K+AQ++AKI KME DK+ KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLL
Sbjct: 853 KMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLL 912
Query: 367 AKFAWAMDVDPDFRF 323
AKFAW+MDVDP FRF
Sbjct: 913 AKFAWSMDVDPSFRF 927
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 575 bits (1482), Expect = e-161
Identities = 294/375 (78%), Positives = 317/375 (84%), Gaps = 1/375 (0%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYI
Sbjct: 535 IPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYI 594
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
+IR YT+DF S+D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +
Sbjct: 595 HSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECI 654
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN LKFDFLGKDSI+Y+NTVEVE VYKAIG FQ KK N DT+KL
Sbjct: 655 PPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQN-------DDLFDKLDTAKL 707
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD +LNK T DG V KI VYQ ANKEVAIICNHQR
Sbjct: 708 NAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQR 767
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPL-KDKEGKPKKNLAPEVIEK 548
+VSK+H QMS+L EKI DL +L +DL RAKKGKPPL KD +GK K+NLAPE +E+
Sbjct: 768 TVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALER 827
Query: 547 KIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLL 368
K+AQ +AKI KME D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLL
Sbjct: 828 KMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLL 887
Query: 367 AKFAWAMDVDPDFRF 323
AKFAWAMDVDP+FRF
Sbjct: 888 AKFAWAMDVDPEFRF 902
>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
Length = 911
Score = 574 bits (1479), Expect = e-161
Identities = 287/374 (76%), Positives = 322/374 (86%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEK+R LK +I
Sbjct: 545 IPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHI 604
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
IR YT+DF SKD TK+QIAVATYLIDKLALRAGNEKDDDEA+TVGCCTLKV+NV V
Sbjct: 605 HKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDDDEAETVGCCTLKVDNVTCV 664
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN L+FDFLGKDSIRY NTVEVE VYKAI +F+ KK T++L
Sbjct: 665 PPNNLQFDFLGKDSIRYFNTVEVELPVYKAIEEFRAGKKPGDDLFDKLD-------TTRL 717
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVAIICNHQR
Sbjct: 718 NAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQR 777
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSH++QM++LNEKI++L +QRDEL DLS+ KKGK DK+GKPK+NLAPE EKK
Sbjct: 778 SVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVKKGKSLGYDKDGKPKRNLAPEAFEKK 837
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
I+QV+ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSL+A
Sbjct: 838 ISQVETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIA 897
Query: 364 KFAWAMDVDPDFRF 323
KF+WAMDVDPDFRF
Sbjct: 898 KFSWAMDVDPDFRF 911
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 574 bits (1479), Expect = e-161
Identities = 293/375 (78%), Positives = 317/375 (84%), Gaps = 1/375 (0%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEKAR LKDYI
Sbjct: 535 IPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKARKLKDYI 594
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
+IR YT+DF S+D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +
Sbjct: 595 HSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECI 654
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN LKFDFLGKDSI+Y+NTVEVE VYKAIG FQ KK N DT+KL
Sbjct: 655 PPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQN-------DDLFDKLDTAKL 707
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD +LNK T DG V KI VYQ ANKEVAIICNHQR
Sbjct: 708 NAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQR 767
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPL-KDKEGKPKKNLAPEVIEK 548
+VSK+H QMS+L EKI DL +L +DL RAKKGKPPL KD +GK K+NLAPE +E+
Sbjct: 768 TVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALER 827
Query: 547 KIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLL 368
K+AQ +AKI KME D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLL
Sbjct: 828 KMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLL 887
Query: 367 AKFAWAMDVDPDFRF 323
AKFAWAMDVDP+FRF
Sbjct: 888 AKFAWAMDVDPEFRF 902
>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222860420|gb|EEE97967.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 860
Score = 573 bits (1478), Expect = e-161
Identities = 290/374 (77%), Positives = 309/374 (82%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYI
Sbjct: 494 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYI 553
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
NIR YT+DF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +
Sbjct: 554 HNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECI 613
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN LKFDFLGKDSIRY NTVEVE VYKAI FQ+AKK TSKL
Sbjct: 614 PPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFDSLD-------TSKL 666
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD L +ET+DG V EK +Y ANK+VAIICNHQR
Sbjct: 667 NAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKFVIYNQANKQVAIICNHQR 726
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
++SKSH+ QMS+L EK+ +L E DL RAKKGKPPLKD +GK K+NL PE IEKK
Sbjct: 727 TISKSHDAQMSRLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLTPEAIEKK 786
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
IA + KI KME+ + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 787 IATTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 846
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDP FRF
Sbjct: 847 KFTWAMDVDPQFRF 860
>gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus persica]
Length = 790
Score = 573 bits (1477), Expect = e-161
Identities = 290/374 (77%), Positives = 315/374 (84%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEV+HDNTVTWLAFWNDPIN +EFKYVFLA SSSLKGQSDKEKYEKAR+LKDYI
Sbjct: 424 IPGESWKEVRHDNTVTWLAFWNDPINQREFKYVFLAPSSSLKGQSDKEKYEKARMLKDYI 483
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
NIR YTRDF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ +
Sbjct: 484 GNIRAAYTRDFTSKDGTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAI 543
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PN L+F+FLGKDSIRY NTVEVE VYKAI FQ K+ DTSKL
Sbjct: 544 APNSLEFNFLGKDSIRYENTVEVEIPVYKAIIQFQTGKRG-------CDDLFDRLDTSKL 596
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRTYNASITLD ILNKETK+G + EK+ VYQHANKEVAIICNHQR
Sbjct: 597 NAHLKELMPGLTAKVFRTYNASITLDNILNKETKEGDLSEKVVVYQHANKEVAIICNHQR 656
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
++SK+H QMS+L EKI +L S EL DL RAKKG+PPLKD +GK K+NL PE +E+K
Sbjct: 657 TISKTHSAQMSRLLEKIGNLQSILKELKTDLDRAKKGRPPLKDADGKQKRNLTPEALERK 716
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
IAQ KI KME+D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 717 IAQTTVKIEKMELDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 776
Query: 364 KFAWAMDVDPDFRF 323
KFAW+MDVDPDFRF
Sbjct: 777 KFAWSMDVDPDFRF 790
>ref|XP_006591998.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
Length = 512
Score = 572 bits (1473), Expect = e-160
Identities = 291/374 (77%), Positives = 315/374 (84%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKE++HDNTVTWLA+W+DPINPK FKYVFLAASSSLKGQSDKEKYEKAR LKDYI
Sbjct: 146 IPGERWKEIRHDNTVTWLAYWSDPINPKLFKYVFLAASSSLKGQSDKEKYEKARTLKDYI 205
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
NIR YT+DF SKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV
Sbjct: 206 GNIRSAYTKDFTSKDITKQQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTRE 265
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN LKF+FLGKDSI+Y NTVEVE VY AI FQ KK TSKL
Sbjct: 266 PPNKLKFNFLGKDSIKYENTVEVELPVYNAILKFQKDKKPGDDLFDKLD-------TSKL 318
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLKELMPGLTAKVFRT+NASITLDV+LNKETKDG V EKI VYQHANK+VAIICNHQR
Sbjct: 319 NAHLKELMPGLTAKVFRTFNASITLDVMLNKETKDGDVGEKIVVYQHANKQVAIICNHQR 378
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSH QMSKL EKI++L + EL DL RA+KGKPP K +GK KKNL+PE++EKK
Sbjct: 379 SVSKSHTAQMSKLTEKIDELQAVLKELKTDLDRARKGKPPSKSSDGKRKKNLSPEMLEKK 438
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
I+Q +AKI KM+ D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 439 ISQTNAKIEKMQRDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 498
Query: 364 KFAWAMDVDPDFRF 323
KF WAMDVDPDFRF
Sbjct: 499 KFCWAMDVDPDFRF 512
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 571 bits (1472), Expect = e-160
Identities = 288/375 (76%), Positives = 318/375 (84%), Gaps = 1/375 (0%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGERWKEV++ NTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI
Sbjct: 558 IPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYI 617
Query: 1264 QNIRRNYTRDF-NSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEL 1088
IR YT+DF N+KDP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVE
Sbjct: 618 HGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP 677
Query: 1087 VPPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSK 908
VPPN+LKFDFLGKDSIRY N V+VEP V+KAI F+ K+ + TSK
Sbjct: 678 VPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLD-------TSK 730
Query: 907 LNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQ 728
LNAHLKELMPGLTAKVFRTYNASITLD +L+KETK G V E + VYQHANKEVAIICNHQ
Sbjct: 731 LNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHANKEVAIICNHQ 790
Query: 727 RSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEK 548
R+VSKSH QMS+LNEKI++L + +EL DLSRAKKGKPP K +GK K+NL PE +E+
Sbjct: 791 RTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKAKRNLNPEALER 850
Query: 547 KIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLL 368
KI Q +AKI KME DK+ KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLL
Sbjct: 851 KITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLL 910
Query: 367 AKFAWAMDVDPDFRF 323
AKFAW+MDVDP FRF
Sbjct: 911 AKFAWSMDVDPSFRF 925
>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
[Oryza sativa Japonica Group]
gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
protein OsJ_26075 [Oryza sativa Japonica Group]
Length = 916
Score = 571 bits (1471), Expect = e-160
Identities = 283/374 (75%), Positives = 322/374 (86%)
Frame = -3
Query: 1444 IPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI 1265
IPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEK+R LK ++
Sbjct: 550 IPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHV 609
Query: 1264 QNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 1085
IR YT+DF SKD TK+QIAVATYLIDKLALRAGNEKD+DEA+TVGCCTLKV+NV V
Sbjct: 610 HKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDEDEAETVGCCTLKVDNVTCV 669
Query: 1084 PPNMLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXDTSKL 905
PPN L+FDFLGKDSIRY NTVEVE VYKAI +F+ KK T++L
Sbjct: 670 PPNKLQFDFLGKDSIRYFNTVEVELLVYKAIEEFRAGKKPGQDLFDKLD-------TTRL 722
Query: 904 NAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQR 725
NAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVAIICNHQR
Sbjct: 723 NAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQR 782
Query: 724 SVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKK 545
SVSKSH++QM++LNEKI++L +QRDEL DLS+ +KGK DK+GKPK+NLAPE EKK
Sbjct: 783 SVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLAPEAFEKK 842
Query: 544 IAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 365
I+Q++ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSL+A
Sbjct: 843 ISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIA 902
Query: 364 KFAWAMDVDPDFRF 323
KF+WAMDVDPDFRF
Sbjct: 903 KFSWAMDVDPDFRF 916