BLASTX nr result
ID: Zingiber24_contig00017300
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00017300
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003570327.1| PREDICTED: COBW domain-containing protein 2-... 80 4e-13
ref|XP_003570326.1| PREDICTED: COBW domain-containing protein 2-... 80 4e-13
dbj|BAK01972.1| predicted protein [Hordeum vulgare subsp. vulgare] 76 5e-12
ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-... 75 7e-12
ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-... 75 7e-12
ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-... 75 7e-12
ref|XP_004235904.1| PREDICTED: COBW domain-containing protein 2-... 75 1e-11
ref|XP_006492106.1| PREDICTED: COBW domain-containing protein 1-... 73 5e-11
ref|XP_006492104.1| PREDICTED: COBW domain-containing protein 1-... 73 5e-11
ref|XP_006427459.1| hypothetical protein CICLE_v10025584mg [Citr... 73 5e-11
gb|AFW73895.1| hypothetical protein ZEAMMB73_196871 [Zea mays] 73 5e-11
gb|AFW73894.1| hypothetical protein ZEAMMB73_196871 [Zea mays] 73 5e-11
gb|AFW73893.1| hypothetical protein ZEAMMB73_196871 [Zea mays] 73 5e-11
gb|EOY25934.1| Plastid transcriptionally active 17 isoform 2, pa... 72 6e-11
gb|EOY25933.1| Plastid transcriptionally active 17 isoform 1 [Th... 72 6e-11
ref|NP_178163.1| protein plastid transcriptionally active 17 [Ar... 72 1e-10
ref|XP_004954251.1| PREDICTED: COBW domain-containing protein 1-... 71 1e-10
ref|XP_004497313.1| PREDICTED: COBW domain-containing protein 1-... 71 1e-10
ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-... 71 1e-10
ref|XP_006302247.1| hypothetical protein CARUB_v10020280mg [Caps... 71 2e-10
>ref|XP_003570327.1| PREDICTED: COBW domain-containing protein 2-like isoform 2
[Brachypodium distachyon]
Length = 422
Score = 79.7 bits (195), Expect = 4e-13
Identities = 52/102 (50%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +3
Query: 84 RHAGLGRGVRNSVLTFPRLRASKPLVARAFSAG--RIVNSGLGRLSMVMRSRCVSCRFAA 257
R A LG R ++F RLR + ++A R V + R RFAA
Sbjct: 14 RAAALGLSARGGAISFLRLRLREAASRSCYAAAAPRAVRAPSWRAQR---------RFAA 64
Query: 258 SA-SATEGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
SA S TE ++DV T IPPDDRIPATIITGFLGSGKTTLLNHI
Sbjct: 65 SAASTTEEDADVDTMIPPDDRIPATIITGFLGSGKTTLLNHI 106
>ref|XP_003570326.1| PREDICTED: COBW domain-containing protein 2-like isoform 1
[Brachypodium distachyon]
Length = 440
Score = 79.7 bits (195), Expect = 4e-13
Identities = 52/102 (50%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +3
Query: 84 RHAGLGRGVRNSVLTFPRLRASKPLVARAFSAG--RIVNSGLGRLSMVMRSRCVSCRFAA 257
R A LG R ++F RLR + ++A R V + R RFAA
Sbjct: 14 RAAALGLSARGGAISFLRLRLREAASRSCYAAAAPRAVRAPSWRAQR---------RFAA 64
Query: 258 SA-SATEGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
SA S TE ++DV T IPPDDRIPATIITGFLGSGKTTLLNHI
Sbjct: 65 SAASTTEEDADVDTMIPPDDRIPATIITGFLGSGKTTLLNHI 106
>dbj|BAK01972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 448
Score = 75.9 bits (185), Expect = 5e-12
Identities = 54/103 (52%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +3
Query: 84 RHAGLGRGVRNSVLTFP---RLRASKPLVARAFSAGRIVNSGLGRLSMVMRSRCVSCRFA 254
R A LG R P RLRA+ A AGR+ S RFA
Sbjct: 14 RAAALGLSARGPASLLPFRLRLRAAPRSCYTAPRAGRVAPSWRAHR-----------RFA 62
Query: 255 ASA-SATEGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
ASA SATE +DV T IPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 63 ASAASATEEGADVDTVIPPDNRIPATIITGFLGSGKTTLLNHI 105
>ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-like isoform 3 [Vitis
vinifera]
Length = 426
Score = 75.5 bits (184), Expect = 7e-12
Identities = 51/95 (53%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Frame = +3
Query: 108 VRNSVLTF---PRLRASKPLVARAFSA-GRIVNSGLGRLSMVMRSRCVSCRFAASASATE 275
VR SVL P+ S L +F R + + G S R R AA + +E
Sbjct: 21 VRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVAGVSSKPQRDRRRFSAVAAQTTQSE 80
Query: 276 GESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
G SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI
Sbjct: 81 G-SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 114
>ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Vitis
vinifera]
Length = 437
Score = 75.5 bits (184), Expect = 7e-12
Identities = 51/95 (53%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Frame = +3
Query: 108 VRNSVLTF---PRLRASKPLVARAFSA-GRIVNSGLGRLSMVMRSRCVSCRFAASASATE 275
VR SVL P+ S L +F R + + G S R R AA + +E
Sbjct: 21 VRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVAGVSSKPQRDRRRFSAVAAQTTQSE 80
Query: 276 GESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
G SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI
Sbjct: 81 G-SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 114
>ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Vitis
vinifera] gi|297743555|emb|CBI36422.3| unnamed protein
product [Vitis vinifera]
Length = 455
Score = 75.5 bits (184), Expect = 7e-12
Identities = 51/95 (53%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Frame = +3
Query: 108 VRNSVLTF---PRLRASKPLVARAFSA-GRIVNSGLGRLSMVMRSRCVSCRFAASASATE 275
VR SVL P+ S L +F R + + G S R R AA + +E
Sbjct: 21 VRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVAGVSSKPQRDRRRFSAVAAQTTQSE 80
Query: 276 GESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
G SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI
Sbjct: 81 G-SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 114
>ref|XP_004235904.1| PREDICTED: COBW domain-containing protein 2-like [Solanum
lycopersicum]
Length = 459
Score = 74.7 bits (182), Expect = 1e-11
Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Frame = +3
Query: 66 FFGLAMRHAGLGRGVRNSVLTFPRL-RASKPLVARAFSAGRIVNSGLGRLSMVMRSRCVS 242
F GLA R G+R +V FP L + SK + FS + S R+S+ + +
Sbjct: 12 FMGLAKRQTPQFYGLRTAV--FPTLWKTSK---CQRFS---LSTSSSSRISVAINTSSKP 63
Query: 243 CRF-------AASASATEGE-SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RF A S SA + E SD+LTKIP D+RIPATIITGFLGSGKTTLLNHI
Sbjct: 64 NRFSRGFTVSATSTSAPQSEDSDILTKIPQDNRIPATIITGFLGSGKTTLLNHI 117
>ref|XP_006492106.1| PREDICTED: COBW domain-containing protein 1-like [Citrus sinensis]
Length = 450
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 RFAASASAT----EGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RF ASASA +SD+LTKIPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 67 RFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHI 115
>ref|XP_006492104.1| PREDICTED: COBW domain-containing protein 1-like [Citrus sinensis]
Length = 452
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 RFAASASAT----EGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RF ASASA +SD+LTKIPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 67 RFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHI 115
>ref|XP_006427459.1| hypothetical protein CICLE_v10025584mg [Citrus clementina]
gi|557529449|gb|ESR40699.1| hypothetical protein
CICLE_v10025584mg [Citrus clementina]
Length = 452
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 RFAASASAT----EGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RF ASASA +SD+LTKIPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 67 RFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHI 115
>gb|AFW73895.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 628
Score = 72.8 bits (177), Expect = 5e-11
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 15/105 (14%)
Frame = +3
Query: 111 RNSVLTFPRLRASKPLVARAFSAG---RIVNSGLGRLSMVMRSRCVSC------------ 245
R+ L ++ P ++ A S G R+V S L RL + +R+ SC
Sbjct: 323 RSRTRAMAALCSASPAISAAASLGSPARVVASFL-RLRLRLRAAKRSCSHAPAPSWRARR 381
Query: 246 RFAASASATEGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RFAA+A+ E S V T IPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 382 RFAAAAAEAEECSGVETLIPPDNRIPATIITGFLGSGKTTLLNHI 426
>gb|AFW73894.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 720
Score = 72.8 bits (177), Expect = 5e-11
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 15/105 (14%)
Frame = +3
Query: 111 RNSVLTFPRLRASKPLVARAFSAG---RIVNSGLGRLSMVMRSRCVSC------------ 245
R+ L ++ P ++ A S G R+V S L RL + +R+ SC
Sbjct: 323 RSRTRAMAALCSASPAISAAASLGSPARVVASFL-RLRLRLRAAKRSCSHAPAPSWRARR 381
Query: 246 RFAASASATEGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RFAA+A+ E S V T IPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 382 RFAAAAAEAEECSGVETLIPPDNRIPATIITGFLGSGKTTLLNHI 426
>gb|AFW73893.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 764
Score = 72.8 bits (177), Expect = 5e-11
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 15/105 (14%)
Frame = +3
Query: 111 RNSVLTFPRLRASKPLVARAFSAG---RIVNSGLGRLSMVMRSRCVSC------------ 245
R+ L ++ P ++ A S G R+V S L RL + +R+ SC
Sbjct: 323 RSRTRAMAALCSASPAISAAASLGSPARVVASFL-RLRLRLRAAKRSCSHAPAPSWRARR 381
Query: 246 RFAASASATEGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RFAA+A+ E S V T IPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 382 RFAAAAAEAEECSGVETLIPPDNRIPATIITGFLGSGKTTLLNHI 426
>gb|EOY25934.1| Plastid transcriptionally active 17 isoform 2, partial [Theobroma
cacao]
Length = 348
Score = 72.4 bits (176), Expect = 6e-11
Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Frame = +3
Query: 150 KPLVARAFSAGRIVNSGLGRLSMVMRSRCVSC---RFAASASAT----EGESDVLTKIPP 308
KP + S L R +++ S C RF+ SA+AT +SDV TKIPP
Sbjct: 42 KPTTIKTQPLSSKTTSSLPR-TIITSSNCCKAHRRRFSVSATATTTPQSEDSDVSTKIPP 100
Query: 309 DDRIPATIITGFLGSGKTTLLNHI 380
D+RIPATIITGFLGSGKTTLLNHI
Sbjct: 101 DNRIPATIITGFLGSGKTTLLNHI 124
>gb|EOY25933.1| Plastid transcriptionally active 17 isoform 1 [Theobroma cacao]
Length = 466
Score = 72.4 bits (176), Expect = 6e-11
Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Frame = +3
Query: 150 KPLVARAFSAGRIVNSGLGRLSMVMRSRCVSC---RFAASASAT----EGESDVLTKIPP 308
KP + S L R +++ S C RF+ SA+AT +SDV TKIPP
Sbjct: 42 KPTTIKTQPLSSKTTSSLPR-TIITSSNCCKAHRRRFSVSATATTTPQSEDSDVSTKIPP 100
Query: 309 DDRIPATIITGFLGSGKTTLLNHI 380
D+RIPATIITGFLGSGKTTLLNHI
Sbjct: 101 DNRIPATIITGFLGSGKTTLLNHI 124
>ref|NP_178163.1| protein plastid transcriptionally active 17 [Arabidopsis thaliana]
gi|6730739|gb|AAF27129.1|AC018849_17 hypothetical
protein; 58060-60358 [Arabidopsis thaliana]
gi|48958493|gb|AAT47799.1| At1g80480 [Arabidopsis
thaliana] gi|51536562|gb|AAU05519.1| At1g80480
[Arabidopsis thaliana] gi|332198289|gb|AEE36410.1|
plastid transcriptionally active 17 protein [Arabidopsis
thaliana]
Length = 444
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/44 (84%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
Frame = +3
Query: 252 AASASATEGE-SDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
+ SASAT+ E SDV TKIPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 66 SVSASATQTEDSDVTTKIPPDNRIPATIITGFLGSGKTTLLNHI 109
>ref|XP_004954251.1| PREDICTED: COBW domain-containing protein 1-like [Setaria italica]
Length = 446
Score = 71.2 bits (173), Expect = 1e-10
Identities = 48/88 (54%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 120 VLTFPRLRASKPLVARAFSAGRIVNSGLGRLSMVMRSRCVSCRFAASA-SATEGESDVLT 296
V +F RLR P AR+++A + R RFAASA S TE S V T
Sbjct: 24 VSSFLRLRL--PTAARSYAAAAAPRAAAAAAPSWRARR----RFAASAASTTEDCSGVDT 77
Query: 297 KIPPDDRIPATIITGFLGSGKTTLLNHI 380
IPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 78 MIPPDNRIPATIITGFLGSGKTTLLNHI 105
>ref|XP_004497313.1| PREDICTED: COBW domain-containing protein 1-like [Cicer arietinum]
Length = 458
Score = 71.2 bits (173), Expect = 1e-10
Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
Frame = +3
Query: 66 FFGLAMR---HAGLGRGVRNSVLTFPRLRAS-KPLVARAFSAGRIV-NSGLGRLSMVMRS 230
FFG A R H L ++T PR + +PL + +FS RI NS + +LS
Sbjct: 13 FFGTASRNPKHFTLLCTNNTRIITTPRTKTHFQPLNSSSFS--RIFRNSSINKLSR---- 66
Query: 231 RCVSCRFAASASA-----TEGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
RF+ S+S T+ +V T IPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 67 -----RFSVSSSTSSPPQTDSSDEVSTVIPPDNRIPATIITGFLGSGKTTLLNHI 116
>ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
gi|449513465|ref|XP_004164332.1| PREDICTED: COBW
domain-containing protein 2-like [Cucumis sativus]
Length = 451
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 5/58 (8%)
Frame = +3
Query: 222 MRSRCVSCRFAASASAT-----EGESDVLTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
++S+ S RF+ AS ES+VLTKIPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 52 LQSKRTSPRFSVFASTATPTSESDESEVLTKIPPDNRIPATIITGFLGSGKTTLLNHI 109
>ref|XP_006302247.1| hypothetical protein CARUB_v10020280mg [Capsella rubella]
gi|482570957|gb|EOA35145.1| hypothetical protein
CARUB_v10020280mg [Capsella rubella]
Length = 454
Score = 70.9 bits (172), Expect = 2e-10
Identities = 45/90 (50%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +3
Query: 117 SVLTFPRLRASKPLVARAFSA--GRIVNSGLGRLSMVMRSRCVSCRFAASASATEGESDV 290
++ F R RA+ V S +VNS R + S +ASA +SDV
Sbjct: 33 AISVFSRRRATTASVTATQSLFFSPVVNSN-------RRRKFSSVSASASAPPQTEDSDV 85
Query: 291 LTKIPPDDRIPATIITGFLGSGKTTLLNHI 380
TKIPPD+RIPATIITGFLGSGKTTLLNHI
Sbjct: 86 TTKIPPDNRIPATIITGFLGSGKTTLLNHI 115