BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00017232
         (341 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23460.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_006483923.1| PREDICTED: pentatricopeptide repeat-containi...    92   5e-17
ref|XP_006438303.1| hypothetical protein CICLE_v10031342mg [Citr...    92   7e-17
ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containi...    92   9e-17
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...    92   9e-17
ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...    90   3e-16
ref|XP_004964414.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    89   6e-16
ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group] g...    89   6e-16
gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]         89   6e-16
ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [S...    89   6e-16
emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]                 89   6e-16
gb|EXB82511.1| hypothetical protein L484_027687 [Morus notabilis]      89   8e-16
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|5...    89   8e-16
gb|ESW25758.1| hypothetical protein PHAVU_003G063200g [Phaseolus...    88   1e-15
ref|XP_004296672.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
gb|EMJ23549.1| hypothetical protein PRUPE_ppa004842mg [Prunus pe...    88   1e-15
gb|EOY00568.1| Tetratricopeptide repeat (TPR)-like superfamily p...    88   1e-15
ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea ma...    87   2e-15

>emb|CBI23460.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/77 (58%), Positives = 59/77 (76%)
 Frame = +3

Query: 108 SMALAPKTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAI 287
           +M    +T+ +AKRS K+LEEALY RLF++G+S ++VR +L  FLKS KRV KWEVG  +
Sbjct: 2   AMPQLSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTV 61

Query: 288 RRLRDHKLFRPALKLSE 338
           ++LRD K F PALKLSE
Sbjct: 62  KKLRDRKRFYPALKLSE 78


>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
           [Vitis vinifera]
          Length = 489

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/77 (58%), Positives = 59/77 (76%)
 Frame = +3

Query: 108 SMALAPKTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAI 287
           +M    +T+ +AKRS K+LEEALY RLF++G+S ++VR +L  FLKS KRV KWEVG  +
Sbjct: 2   AMPQLSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTV 61

Query: 288 RRLRDHKLFRPALKLSE 338
           ++LRD K F PALKLSE
Sbjct: 62  KKLRDRKRFYPALKLSE 78


>ref|XP_006483923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Citrus sinensis]
          Length = 490

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 44/71 (61%), Positives = 58/71 (81%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +T+ +AKRS K LEEALY RLF++G+S ++VR +L +FLKS KRV KWEVG  +++LRD 
Sbjct: 9   RTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDR 68

Query: 306 KLFRPALKLSE 338
           KL+ PALKLSE
Sbjct: 69  KLYYPALKLSE 79


>ref|XP_006438303.1| hypothetical protein CICLE_v10031342mg [Citrus clementina]
           gi|557540499|gb|ESR51543.1| hypothetical protein
           CICLE_v10031342mg [Citrus clementina]
          Length = 490

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 44/71 (61%), Positives = 57/71 (80%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +T+ +AKRS K LEEALY RLF++G S ++VR +L +FLKS KRV KWEVG  +++LRD 
Sbjct: 9   RTKNIAKRSKKHLEEALYDRLFKKGGSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDR 68

Query: 306 KLFRPALKLSE 338
           KL+ PALKLSE
Sbjct: 69  KLYYPALKLSE 79


>ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Cucumis sativus]
           gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY
           PROTEIN: pentatricopeptide repeat-containing protein
           At1g60770-like [Cucumis sativus]
          Length = 489

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 45/72 (62%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = +3

Query: 129 TRELAKRSG-KFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +++LAKRS  K+LEEALY RLF++G S  +VR +L +F+KSHKRV KWEVG  +R+LRD 
Sbjct: 11  SKDLAKRSAEKYLEEALYIRLFKDGGSEKSVRLQLNKFIKSHKRVFKWEVGDTLRKLRDR 70

Query: 306 KLFRPALKLSEV 341
           KL+ PALKLSE+
Sbjct: 71  KLYYPALKLSEI 82


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Glycine max]
          Length = 490

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 42/76 (55%), Positives = 59/76 (77%)
 Frame = +3

Query: 111 MALAPKTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIR 290
           M L  +++ + KRS K+LEEALY +LF++G+S + VR  L  F+KS KRV+KWEVG  ++
Sbjct: 4   MQLYGRSKSVVKRSKKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLK 63

Query: 291 RLRDHKLFRPALKLSE 338
           +LRD KL++PALKLSE
Sbjct: 64  KLRDRKLYQPALKLSE 79


>ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Brachypodium distachyon]
          Length = 536

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 43/76 (56%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = +3

Query: 117 LAPKTRELAKRSGK-FLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRR 293
           +A + ++LA+RS K ++EEALYRRLFR G++P  VR +++ FL S KR  KWEVG  +RR
Sbjct: 1   MATRVKDLARRSSKKYVEEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60

Query: 294 LRDHKLFRPALKLSEV 341
           LR  +L+RPALKL+EV
Sbjct: 61  LRRQELYRPALKLTEV 76


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/71 (60%), Positives = 57/71 (80%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +T+ +AKRS K+LEEALY RLF+EG+S + VR +L +FLKS KRV+KWEVG  +++LR  
Sbjct: 9   RTKNVAKRSKKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSR 68

Query: 306 KLFRPALKLSE 338
            L+ PALKLSE
Sbjct: 69  GLYYPALKLSE 79


>ref|XP_004964414.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g60770-like [Setaria italica]
          Length = 487

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/76 (55%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
 Frame = +3

Query: 117 LAPKTRELAKRSGK-FLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRR 293
           +A + +++A+RS K ++EEALYRRLFR+G++P  VR +++ FL S KR  KWEVG  +RR
Sbjct: 1   MATRVKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60

Query: 294 LRDHKLFRPALKLSEV 341
           +R + L+RPALKLSEV
Sbjct: 61  MRRNALYRPALKLSEV 76


>ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
           gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza
           sativa Japonica Group] gi|38344779|emb|CAE01505.2|
           OSJNBb0026L04.10 [Oryza sativa Japonica Group]
           gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa
           Japonica Group] gi|125543501|gb|EAY89640.1| hypothetical
           protein OsI_11170 [Oryza sativa Indica Group]
           gi|125589896|gb|EAZ30246.1| hypothetical protein
           OsJ_14297 [Oryza sativa Japonica Group]
           gi|215767374|dbj|BAG99602.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 524

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/76 (55%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = +3

Query: 117 LAPKTRELAKRSGK-FLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRR 293
           +A + +++A+RS K +++EALYRRLFR G++P  VR +++ FL S KR  KWEVG  +RR
Sbjct: 1   MATRVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60

Query: 294 LRDHKLFRPALKLSEV 341
           LR   L+RPALKLSEV
Sbjct: 61  LRKQALYRPALKLSEV 76


>gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
          Length = 596

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = +3

Query: 84  GGERLEWESMALAPKTRELAKRSGK-FLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRV 260
           GGE    E+  +A + +++A+RS K ++EEALYRRLFR+G++P  VR +++ FL S KR 
Sbjct: 51  GGEEERAEA-EMATRMKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRA 109

Query: 261 HKWEVGAAIRRLRDHKLFRPALKLSEV 341
            KWEVG  +RR+R + L+RP+LKLSEV
Sbjct: 110 FKWEVGVCVRRMRRNALYRPSLKLSEV 136


>ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
           gi|241914622|gb|EER87766.1| hypothetical protein
           SORBIDRAFT_10g001830 [Sorghum bicolor]
          Length = 536

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/76 (55%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
 Frame = +3

Query: 117 LAPKTRELAKRSGK-FLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRR 293
           +A + +++A+RS K ++EEALYRRLFR+G++P  VR +++ FL S KR  KWEVG  +RR
Sbjct: 1   MATRVKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60

Query: 294 LRDHKLFRPALKLSEV 341
           +R + L+RPALKLSEV
Sbjct: 61  MRRNALYRPALKLSEV 76


>emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
          Length = 524

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/76 (55%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = +3

Query: 117 LAPKTRELAKRSGK-FLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRR 293
           +A + +++A+RS K +++EALYRRLFR G++P  VR +++ FL S KR  KWEVG  +RR
Sbjct: 1   MATRVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60

Query: 294 LRDHKLFRPALKLSEV 341
           LR   L+RPALKLSEV
Sbjct: 61  LRKQALYRPALKLSEV 76


>gb|EXB82511.1| hypothetical protein L484_027687 [Morus notabilis]
          Length = 500

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/72 (56%), Positives = 56/72 (77%)
 Frame = +3

Query: 117 LAPKTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRL 296
           L  ++R + +RS K+LEEALY+RLF++G S ++VR +L +FLKS KRV KWEV   +R+L
Sbjct: 5   LLSRSRSVTRRSSKYLEEALYKRLFKDGGSEVSVRRQLNDFLKSRKRVFKWEVDDTLRKL 64

Query: 297 RDHKLFRPALKL 332
           RD KL+ PALKL
Sbjct: 65  RDRKLYCPALKL 76


>ref|XP_002331159.1| predicted protein [Populus trichocarpa]
           gi|566176699|ref|XP_006381714.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|118487894|gb|ABK95769.1| unknown [Populus
           trichocarpa] gi|550336465|gb|ERP59511.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 490

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/71 (59%), Positives = 56/71 (78%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +T+ + KRS K+LEEALY RLF+EG+S ++VR +L +FLKS KRV KWEVG  I++LR  
Sbjct: 9   RTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSR 68

Query: 306 KLFRPALKLSE 338
            L+ PA+KLSE
Sbjct: 69  NLYYPAVKLSE 79


>gb|ESW25758.1| hypothetical protein PHAVU_003G063200g [Phaseolus vulgaris]
          Length = 489

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 39/71 (54%), Positives = 57/71 (80%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           + + + KRS K+LEEALY +LF++G+S ++VR  L  F+K+ KRV+KWEVG  +++LRD 
Sbjct: 9   RNKSVVKRSKKYLEEALYVKLFKDGSSQLSVRQSLNNFIKTGKRVYKWEVGDTLKKLRDR 68

Query: 306 KLFRPALKLSE 338
           KL++PALKLSE
Sbjct: 69  KLYQPALKLSE 79


>ref|XP_004296672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Fragaria vesca subsp. vesca]
          Length = 490

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/71 (57%), Positives = 55/71 (77%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +T+ + KRS K++EEALY  LF++G S ++VR KL EF+KS KRV KWEVG  +++LR  
Sbjct: 9   RTKSVTKRSSKYVEEALYVWLFKDGGSEVSVRQKLNEFIKSRKRVFKWEVGDTLKKLRQR 68

Query: 306 KLFRPALKLSE 338
           KL+ PALKLSE
Sbjct: 69  KLYYPALKLSE 79


>gb|EMJ23549.1| hypothetical protein PRUPE_ppa004842mg [Prunus persica]
          Length = 489

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 40/71 (56%), Positives = 57/71 (80%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +T+ + KRS K++E+ALY RLF++G S ++VR +L E LKS KRV+KWEVG  +++LR+ 
Sbjct: 8   RTKSVTKRSTKYVEQALYLRLFKDGGSEVSVRQQLNEVLKSRKRVYKWEVGDTLKKLRER 67

Query: 306 KLFRPALKLSE 338
           KL+ PALKLSE
Sbjct: 68  KLYYPALKLSE 78


>gb|EOY00568.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 491

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/71 (56%), Positives = 57/71 (80%)
 Frame = +3

Query: 126 KTRELAKRSGKFLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRRLRDH 305
           +T+ + +RS K+LEEALY RLF++G+S ++VR +L +FLKS KRV+KWEV   +++LR  
Sbjct: 9   RTKNVTRRSKKYLEEALYHRLFKDGSSEISVRQQLNQFLKSSKRVYKWEVDDTLKKLRHR 68

Query: 306 KLFRPALKLSE 338
           KL+ PALKLSE
Sbjct: 69  KLYYPALKLSE 79


>ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
           gi|223949449|gb|ACN28808.1| unknown [Zea mays]
          Length = 536

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/76 (53%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
 Frame = +3

Query: 117 LAPKTRELAKRSGK-FLEEALYRRLFREGNSPMTVRNKLEEFLKSHKRVHKWEVGAAIRR 293
           +A + +++A+RS K ++EEALYRRLFR+G++P  VR +++ FL S KR  KWEVG  +RR
Sbjct: 1   MATRMKDVARRSTKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR 60

Query: 294 LRDHKLFRPALKLSEV 341
           +R + L+RP+LKLSEV
Sbjct: 61  MRRNALYRPSLKLSEV 76