BLASTX nr result

ID: Zingiber24_contig00017207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00017207
         (1429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844062.1| hypothetical protein AMTR_s00006p00247700 [A...    61   1e-06

>ref|XP_006844062.1| hypothetical protein AMTR_s00006p00247700 [Amborella trichopoda]
            gi|548846461|gb|ERN05737.1| hypothetical protein
            AMTR_s00006p00247700 [Amborella trichopoda]
          Length = 542

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 88/343 (25%), Positives = 138/343 (40%), Gaps = 26/343 (7%)
 Frame = -3

Query: 953  SELFSDKTITHINLH--EVIEGRDCQVIKDICVDDGLHSCEK-NLCENTVASEKLIRGSK 783
            SEL++DK +T +     + ++     V+KDIC+D+GL +  K  L +N    EK I GS 
Sbjct: 186  SELYTDKNVTEVTERAMDCLKENSDNVVKDICIDEGLPTQNKLPLSDNDSCCEK-ICGSL 244

Query: 782  STEANSNDALSQKMADSSIQVQEETEPISVVDSHAMDEKLLRGFTEIKEILDESNKISYG 603
             ++ N +D L++       +V      IS          LL      +++  E N  +  
Sbjct: 245  HSDVNGDDDLTRNAGTGVSEVDACASSISEAKEDLQSSILL------EDLNGEDNDSA-- 296

Query: 602  KVTLQQLFSLGELETDMQGIAPGGINDDKKSPHQKKTEL--VSNYSCGTSGRRSFYSLPF 429
                 ++F+LG+L  + +  +        KS  +  T +  VS        R        
Sbjct: 297  -----KIFTLGDLLQEQKSESGSFEKRGNKSCEENSTSMKPVSMQDLDMEER-------- 343

Query: 428  DVGDPCETSTDIENHGGIVKGNSRKKSFSAASVPIDISASKNDGVENN------APNDQL 267
             VG     S D      IVK  +  +  S A VP    AS    V+++        N ++
Sbjct: 344  -VGPTSSESND------IVKQQATNEVGSKAEVPTVQCASDQIKVKSSDTEALPTSNSKV 396

Query: 266  EIPSTS-DFKPGAEAEVISGTGMDEVIMNNAHNHSVSEITFYDPAAASD---QRMFYHNN 99
            E  ST+ DF+      ++   G           H V+E +        +    +   H++
Sbjct: 397  ENGSTTLDFESQEGQMIVEKNG----YKGGGDEHQVTEASSERNLVGGEGTTTQSLVHHS 452

Query: 98   HG------HSNFTDP-----SVSGPRGTSGHLAYSGSISLRSD 3
            HG       S + DP     SVSG    SG + YSGSISLRSD
Sbjct: 453  HGLSISDRKSWYNDPTDLTGSVSGQIPYSGPIPYSGSISLRSD 495


Top