BLASTX nr result
ID: Zingiber24_contig00016937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00016937
(1270 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera] 311 4e-82
ref|XP_006649801.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 309 2e-81
ref|XP_004984686.1| PREDICTED: 50S ribosomal protein L4, chlorop... 308 3e-81
ref|XP_002468132.1| hypothetical protein SORBIDRAFT_01g040120 [S... 308 4e-81
gb|EEC74918.1| hypothetical protein OsI_10864 [Oryza sativa Indi... 305 3e-80
ref|NP_001049648.1| Os03g0265400 [Oryza sativa Japonica Group] g... 305 3e-80
gb|AAP06837.1| unknown protein [Oryza sativa Japonica Group] 305 3e-80
gb|EEE58753.1| hypothetical protein OsJ_10246 [Oryza sativa Japo... 303 8e-80
tpg|DAA44542.1| TPA: 50S ribosomal protein L4 [Zea mays] 302 2e-79
ref|NP_001149608.1| 50S ribosomal protein L4 [Zea mays] gi|19562... 302 2e-79
gb|ACF87971.1| unknown [Zea mays] 302 2e-79
ref|XP_003558283.1| PREDICTED: 50S ribosomal protein L4, chlorop... 301 4e-79
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop... 301 5e-79
sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, ch... 299 1e-78
ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Popu... 298 2e-78
gb|ESW06442.1| hypothetical protein PHAVU_010G048100g [Phaseolus... 298 3e-78
ref|XP_006348359.1| PREDICTED: 50S ribosomal protein L4, chlorop... 296 1e-77
ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chlorop... 296 2e-77
dbj|BAJ86004.1| predicted protein [Hordeum vulgare subsp. vulgare] 296 2e-77
ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chlorop... 294 5e-77
>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
Length = 306
Score = 311 bits (797), Expect = 4e-82
Identities = 154/227 (67%), Positives = 184/227 (81%)
Frame = -2
Query: 1161 PNLSLTKHLRLAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQ 982
PN L L+VR D+ A+P+LSF+G KVGE L+LKSAP +T+RA+VHRG++T+ QN+
Sbjct: 34 PNSFLKPLKPLSVRSDLVAIPILSFTGEKVGETQLNLKSAPLDTARAVVHRGIITDLQNR 93
Query: 981 RRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRK 802
RRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWS+KINRK
Sbjct: 94 RRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSIKINRK 153
Query: 801 EKRXXXXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEV 622
EKR VVEDF +F+ PKTK+F++A++RWG+DPK K+MFLMTEV
Sbjct: 154 EKR--LAISTAMSSAAVNTIVVEDFSDKFDK-PKTKEFISAMKRWGIDPKEKSMFLMTEV 210
Query: 621 SDNVLLSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
SDNV LS RN+GT+K+LTPR LNLFDIL+S+KLVLT+ V+YLN Y
Sbjct: 211 SDNVRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETVDYLNRMY 257
>ref|XP_006649801.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L4,
chloroplastic-like [Oryza brachyantha]
Length = 320
Score = 309 bits (791), Expect = 2e-81
Identities = 149/216 (68%), Positives = 178/216 (82%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R A LPVLSFSG KVGEV L LKSAP T+RA+VHRGL+T++QN+RRGTASTLTRG
Sbjct: 56 ALRAGAAPLPVLSFSGEKVGEVALDLKSAPPSTARAVVHRGLITDRQNKRRGTASTLTRG 115
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWS+KINRKEKR
Sbjct: 116 EVRGGGRKPYQQKKTGKARRGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALA 175
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+F++EF +GPKT+DFVAAL+RWGLDPK+KAMF T+ +DNV LS RN+
Sbjct: 176 SAAVAEDAFVVEEFDEEFSSGPKTRDFVAALQRWGLDPKQKAMFFATDFTDNVRLSGRNI 235
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +A++YLNS Y
Sbjct: 236 GSLKMLTPRTLNLYDILDARKLFFTPAAIDYLNSRY 271
>ref|XP_004984686.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Setaria
italica]
Length = 308
Score = 308 bits (789), Expect = 3e-81
Identities = 150/216 (69%), Positives = 177/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G+KVGEV L LKSAP T+RA+VHR ++T++QN RRGTASTLTRG
Sbjct: 52 ALRAEAATLPVLSFTGDKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRG 111
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGSQRTPLRPGGGVVFGPKPRDWS+KINRKEKR
Sbjct: 112 EVRGGGRKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTALA 171
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+F++ F +GPKT+DFVAAL+RWGLDPK+KAMF TE DNV LS RN+
Sbjct: 172 SAAVAEDAFVVEEFDEAFASGPKTRDFVAALQRWGLDPKQKAMFFATEFDDNVRLSGRNI 231
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +AVEYLNS Y
Sbjct: 232 GSLKMLTPRTLNLYDILDARKLFFTPAAVEYLNSRY 267
>ref|XP_002468132.1| hypothetical protein SORBIDRAFT_01g040120 [Sorghum bicolor]
gi|241921986|gb|EER95130.1| hypothetical protein
SORBIDRAFT_01g040120 [Sorghum bicolor]
Length = 297
Score = 308 bits (788), Expect = 4e-81
Identities = 150/216 (69%), Positives = 176/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN RRGTASTLTRG
Sbjct: 48 ALRAEAATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRG 107
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGGKKPY QKKTG+ARRGSQRTPLRPGGGVVFGPKPRDWS+KINRKEKR
Sbjct: 108 EVRGGGKKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTALA 167
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+F++ F +GPKT+DFVAAL+RWGLDPK+KAMF TE DNV LS RN+
Sbjct: 168 SAAVAEDAFVVEEFDEAFASGPKTRDFVAALQRWGLDPKQKAMFFATEFDDNVRLSGRNI 227
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +AV+YLNS Y
Sbjct: 228 GSLKMLTPRTLNLYDILDARKLFFTPAAVDYLNSRY 263
>gb|EEC74918.1| hypothetical protein OsI_10864 [Oryza sativa Indica Group]
Length = 324
Score = 305 bits (780), Expect = 3e-80
Identities = 146/216 (67%), Positives = 175/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN+RRGTASTLTRG
Sbjct: 60 ALRAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRG 119
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWS+KINRKEKR
Sbjct: 120 EVRGGGRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALA 179
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+F++EF GPKT+DFVAAL+RWGLDPK KAMF T+ +DNV LS RN+
Sbjct: 180 SAAVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNI 239
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +A+ YLNS Y
Sbjct: 240 GSLKMLTPRTLNLYDILDARKLFFTPAAINYLNSRY 275
>ref|NP_001049648.1| Os03g0265400 [Oryza sativa Japonica Group]
gi|108707338|gb|ABF95133.1| 50S ribosomal protein L4,
chloroplast precursor, putative, expressed [Oryza sativa
Japonica Group] gi|113548119|dbj|BAF11562.1| Os03g0265400
[Oryza sativa Japonica Group]
gi|215678998|dbj|BAG96428.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215692528|dbj|BAG87948.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737540|dbj|BAG96670.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 323
Score = 305 bits (780), Expect = 3e-80
Identities = 146/216 (67%), Positives = 175/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN+RRGTASTLTRG
Sbjct: 59 ALRAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRG 118
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWS+KINRKEKR
Sbjct: 119 EVRGGGRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALA 178
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+F++EF GPKT+DFVAAL+RWGLDPK KAMF T+ +DNV LS RN+
Sbjct: 179 SAAVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNI 238
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +A+ YLNS Y
Sbjct: 239 GSLKMLTPRTLNLYDILDARKLFFTPAAINYLNSRY 274
>gb|AAP06837.1| unknown protein [Oryza sativa Japonica Group]
Length = 426
Score = 305 bits (780), Expect = 3e-80
Identities = 146/216 (67%), Positives = 175/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN+RRGTASTLTRG
Sbjct: 59 ALRAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRG 118
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWS+KINRKEKR
Sbjct: 119 EVRGGGRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALA 178
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+F++EF GPKT+DFVAAL+RWGLDPK KAMF T+ +DNV LS RN+
Sbjct: 179 SAAVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNI 238
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +A+ YLNS Y
Sbjct: 239 GSLKMLTPRTLNLYDILDARKLFFTPAAINYLNSRY 274
>gb|EEE58753.1| hypothetical protein OsJ_10246 [Oryza sativa Japonica Group]
Length = 323
Score = 303 bits (777), Expect = 8e-80
Identities = 145/216 (67%), Positives = 175/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN+RRGTASTLTRG
Sbjct: 59 ALRAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRG 118
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGS RTP+RPGGGV+FGPKPRDWS+KINRKEKR
Sbjct: 119 EVRGGGRKPYQQKKTGKARRGSMRTPVRPGGGVIFGPKPRDWSIKINRKEKRLAISTALA 178
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+F++EF GPKT+DFVAAL+RWGLDPK KAMF T+ +DNV LS RN+
Sbjct: 179 SAAVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNI 238
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +A+ YLNS Y
Sbjct: 239 GSLKMLTPRTLNLYDILDARKLFFTPAAINYLNSRY 274
>tpg|DAA44542.1| TPA: 50S ribosomal protein L4 [Zea mays]
Length = 314
Score = 302 bits (774), Expect = 2e-79
Identities = 149/216 (68%), Positives = 176/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN RRGTASTLTRG
Sbjct: 54 ALRAEAATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRG 113
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGSQRTPLRPGGGVVFGPKPRDWS+KINRKEKR
Sbjct: 114 EVRGGGRKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKR--LAISTA 171
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+FE+ F +GPKT+DFVAAL+RWGLDPK+KAMF T+ DNV LS RN+
Sbjct: 172 IVSAAKDAFVVEEFEEAFASGPKTRDFVAALQRWGLDPKQKAMFFATDFDDNVRLSGRNI 231
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +AV+YLNS Y
Sbjct: 232 GSLKMLTPRTLNLYDILDARKLFFTPAAVDYLNSRY 267
>ref|NP_001149608.1| 50S ribosomal protein L4 [Zea mays] gi|195628460|gb|ACG36060.1| 50S
ribosomal protein L4 [Zea mays]
Length = 314
Score = 302 bits (774), Expect = 2e-79
Identities = 149/216 (68%), Positives = 176/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN RRGTASTLTRG
Sbjct: 54 ALRAEAATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRG 113
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGSQRTPLRPGGGVVFGPKPRDWS+KINRKEKR
Sbjct: 114 EVRGGGRKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKR--LAISTA 171
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+FE+ F +GPKT+DFVAAL+RWGLDPK+KAMF T+ DNV LS RN+
Sbjct: 172 IVSAAKDAFVVEEFEEAFASGPKTRDFVAALQRWGLDPKQKAMFFATDFDDNVRLSGRNI 231
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +AV+YLNS Y
Sbjct: 232 GSLKMLTPRTLNLYDILDARKLFFTPAAVDYLNSRY 267
>gb|ACF87971.1| unknown [Zea mays]
Length = 314
Score = 302 bits (774), Expect = 2e-79
Identities = 149/216 (68%), Positives = 176/216 (81%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + A LPVLSF+G KVGEV L LKSAP T+RA+VHR ++T++QN RRGTASTLTRG
Sbjct: 54 ALRAEAATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRG 113
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGSQRTPLRPGGGVVFGPKPRDWS+KINRKEKR
Sbjct: 114 EVRGGGRKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKR--LAISTA 171
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
AFVVE+FE+ F +GPKT+DFVAAL+RWGLDPK+KAMF T+ DNV LS RN+
Sbjct: 172 IVSAAKDAFVVEEFEEAFASGPKTRDFVAALQRWGLDPKQKAMFFATDFDDNVRLSGRNI 231
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
G++K+LTPR LNL+DILD+ KL T +AV+YLNS Y
Sbjct: 232 GSLKMLTPRTLNLYDILDARKLFFTPAAVDYLNSRY 267
>ref|XP_003558283.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Brachypodium
distachyon]
Length = 313
Score = 301 bits (771), Expect = 4e-79
Identities = 143/216 (66%), Positives = 174/216 (80%)
Frame = -2
Query: 1128 AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTRG 949
A+R + LPV+SF+G KVGEV L LKSAP T+RA+VHR L+T++QN RRGTASTLTRG
Sbjct: 55 ALRAEATTLPVISFTGEKVGEVALDLKSAPPSTARAVVHRALITDRQNARRGTASTLTRG 114
Query: 948 EVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXXX 769
EVRGGG+KPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWS+KINRKEKR
Sbjct: 115 EVRGGGRKPYGQKKTGKARRGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALA 174
Query: 768 XXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCRNL 589
+FVV++F++EF TGP+T+DFVAAL+RWGLDPK KAMF TE+ DNV LS RN+
Sbjct: 175 SAAVANDSFVVQEFDEEFATGPRTRDFVAALQRWGLDPKEKAMFFSTELDDNVRLSGRNI 234
Query: 588 GTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
GT+K+LTPR LNL+DILD+ K T +A++YLN+ Y
Sbjct: 235 GTLKMLTPRTLNLYDILDARKHFFTPAAIDYLNTRY 270
>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
ribosomal protein L4, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 301 bits (770), Expect = 5e-79
Identities = 152/227 (66%), Positives = 179/227 (78%)
Frame = -2
Query: 1161 PNLSLTKHLRLAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQ 982
PN + L++ ++A LPVLSF+G KVGE L LKSAP ET+RA+VHR ++T+QQN+
Sbjct: 35 PNSLKPQTKTLSISSELATLPVLSFTGQKVGETYLDLKSAPPETARAVVHRAIITDQQNK 94
Query: 981 RRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRK 802
RRGTASTLTR EV GGGKKPY QKKTGRARRGS RTPLRPGGGVVFGPKPRDWS+KINRK
Sbjct: 95 RRGTASTLTRAEVSGGGKKPYKQKKTGRARRGSMRTPLRPGGGVVFGPKPRDWSIKINRK 154
Query: 801 EKRXXXXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEV 622
EK+ VVE+F +FE PKTK+F+AAL+RWG+DPK K++FLMTEV
Sbjct: 155 EKK--LAISTAVASAAVNTIVVEEFGDKFEK-PKTKEFIAALKRWGIDPKEKSLFLMTEV 211
Query: 621 SDNVLLSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
SDNV LS RN+GT+KLLTPR LNLFDILDS+KLVLT +AV+YLN Y
Sbjct: 212 SDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDYLNERY 258
>sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, chloroplastic; AltName:
Full=CL4; AltName: Full=R-protein L4; Flags: Precursor
gi|3298439|dbj|BAA31510.1| chloroplast ribosomal protein
L4 [Nicotiana tabacum]
Length = 282
Score = 299 bits (766), Expect = 1e-78
Identities = 152/239 (63%), Positives = 181/239 (75%), Gaps = 12/239 (5%)
Frame = -2
Query: 1161 PNLSLTKHLRL------------AVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAI 1018
PN+ +KHL +R +VA +P+LSF G +VG L+LKSAP +T+RA+
Sbjct: 17 PNIQSSKHLLFRSPKQLSVAAIATIRSEVATIPILSFDGAEVGSTTLNLKSAPLDTARAV 76
Query: 1017 VHRGLVTEQQNQRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGP 838
VHRGL T+ +NQRRGTASTLTR EVRGGG KPYPQKKTGRARRGS RTPLRPGGGVVFGP
Sbjct: 77 VHRGLTTDLRNQRRGTASTLTRSEVRGGGIKPYPQKKTGRARRGSNRTPLRPGGGVVFGP 136
Query: 837 KPRDWSVKINRKEKRXXXXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLD 658
KP+DWSVKIN+KEKR VVE+F +FE PKTK+F+ +RRWGLD
Sbjct: 137 KPKDWSVKINKKEKR--LAISTALSSASENTIVVEEFNDKFEK-PKTKEFIDLMRRWGLD 193
Query: 657 PKRKAMFLMTEVSDNVLLSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
PK K++FLMT+VSDNV+LS RN+GT+K+LTPR LNLFDILDSEKLVLTKSAV++LN Y
Sbjct: 194 PKEKSLFLMTDVSDNVILSSRNIGTLKMLTPRTLNLFDILDSEKLVLTKSAVDFLNERY 252
>ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Populus trichocarpa]
gi|550336953|gb|EEE92992.2| hypothetical protein
POPTR_0006s23770g [Populus trichocarpa]
Length = 290
Score = 298 bits (764), Expect = 2e-78
Identities = 145/218 (66%), Positives = 175/218 (80%), Gaps = 1/218 (0%)
Frame = -2
Query: 1131 LAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTASTLTR 952
L++ C VA LP+LSF+G K+GE L LKSAP ET+RA+VHRG++T+QQN+RRGTASTLTR
Sbjct: 41 LSISCQVATLPILSFTGEKIGETYLDLKSAPPETARAVVHRGIITDQQNKRRGTASTLTR 100
Query: 951 GEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXXXXXXX 772
GEVRGGG+KPYPQKKTGRARRGS R+PLRPGGGV+FGPKPRDWS+KINRKEKR
Sbjct: 101 GEVRGGGRKPYPQKKTGRARRGSMRSPLRPGGGVIFGPKPRDWSIKINRKEKRLAMSTAL 160
Query: 771 XXXXXXXXAFV-VEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVLLSCR 595
+ + VE+F +FE PKTK+F+ A+ RWGLDPK K MFLM +VSDNV LS R
Sbjct: 161 SSAASESESVICVEEFGDKFEK-PKTKEFIEAMNRWGLDPKEKVMFLMMDVSDNVGLSSR 219
Query: 594 NLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
N+GT+++LTPR LNLFDIL+S+KLVLT V+YLN Y
Sbjct: 220 NIGTLRMLTPRTLNLFDILNSDKLVLTPDTVDYLNGRY 257
>gb|ESW06442.1| hypothetical protein PHAVU_010G048100g [Phaseolus vulgaris]
Length = 308
Score = 298 bits (763), Expect = 3e-78
Identities = 149/227 (65%), Positives = 178/227 (78%)
Frame = -2
Query: 1161 PNLSLTKHLRLAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQ 982
P + T L+V C + +PVL+FSG KVGE L L+SAP T+RA+VHR +VT+ QN+
Sbjct: 41 PLTTTTTTTSLSVSCKASPIPVLNFSGEKVGESLLDLRSAPPSTARAVVHRAVVTDLQNK 100
Query: 981 RRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRK 802
RRGTASTLTRGEVRGGG+KP+PQKKTGRARRGS RTPLRPGGGV+FGPKPRDWSVKINRK
Sbjct: 101 RRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSVKINRK 160
Query: 801 EKRXXXXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEV 622
EKR A VVEDF EF P+T++FVAA++RWGLDPK KAMFLMTEV
Sbjct: 161 EKR--LAISTAMASASSSAIVVEDFAAEFAEKPRTREFVAAMKRWGLDPKEKAMFLMTEV 218
Query: 621 SDNVLLSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
++NV LS RN+GT+K+ TPR LNL+DILD++KLVLT+ AV+YLN Y
Sbjct: 219 AENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRY 265
>ref|XP_006348359.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Solanum
tuberosum]
Length = 285
Score = 296 bits (758), Expect = 1e-77
Identities = 147/222 (66%), Positives = 177/222 (79%)
Frame = -2
Query: 1146 TKHLRLAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTEQQNQRRGTA 967
+K + ++R + A +P+LSF G +VG L+LKSAP +T+RA+VHRGL T+ +NQRRGTA
Sbjct: 36 SKQQQFSIRSEAATIPILSFDGTEVGTTTLNLKSAPLDTARAVVHRGLTTDLRNQRRGTA 95
Query: 966 STLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVKINRKEKRXX 787
STLTR +VRGGG KPYPQKKTGRARRGS RTPLRPGGGVVFGPKP+DWSVKIN+KEKR
Sbjct: 96 STLTRAQVRGGGIKPYPQKKTGRARRGSNRTPLRPGGGVVFGPKPKDWSVKINKKEKR-- 153
Query: 786 XXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFLMTEVSDNVL 607
A VVE+F+ +FE PKTK+F+ +RRWGLDPK K++FLMTEVSDNV+
Sbjct: 154 LAISTALSSATQNAIVVEEFDDKFEK-PKTKEFIDLMRRWGLDPKEKSLFLMTEVSDNVI 212
Query: 606 LSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
LS RN+ T+K+LTPR LNLFDILDSEKLV TKSAVE+LN Y
Sbjct: 213 LSSRNISTLKMLTPRTLNLFDILDSEKLVFTKSAVEFLNERY 254
>ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
[Glycine max]
Length = 310
Score = 296 bits (757), Expect = 2e-77
Identities = 150/232 (64%), Positives = 181/232 (78%)
Frame = -2
Query: 1176 RSHPFPNLSLTKHLRLAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVT 997
+S+ FP L K L ++ + LPVL+FSG +VGE L L+SAP +T+RA+VHR +VT
Sbjct: 39 KSNSFPVLPSKKPLSISCKAS-PPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVT 97
Query: 996 EQQNQRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSV 817
+ QN+RRGTASTLTRGEVRGGG+KP+PQKKTGRARRGS RTPLRPGGGV+FGPKPRDWS+
Sbjct: 98 DLQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSI 157
Query: 816 KINRKEKRXXXXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMF 637
KINRKEKR A VVEDF EF PKTK+F+AA++RWGLDPK KAMF
Sbjct: 158 KINRKEKR--LAISTAVASAAASAVVVEDFAAEFAEKPKTKEFIAAMKRWGLDPKEKAMF 215
Query: 636 LMTEVSDNVLLSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
LMTEV +NV LS RN+GT+K+ TPR LNL+DILD++KLVLT+ AV+YLN Y
Sbjct: 216 LMTEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRY 267
>dbj|BAJ86004.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 296 bits (757), Expect = 2e-77
Identities = 143/235 (60%), Positives = 181/235 (77%), Gaps = 4/235 (1%)
Frame = -2
Query: 1173 SHPFPNLSL----TKHLRLAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRG 1006
S FP+ S+ + + A+R + LPV++F+G KVGEV L +K+AP T+RA+VHR
Sbjct: 37 SSSFPHASVRGRPSASILRALRAEATTLPVINFTGEKVGEVALDIKAAPPSTARAVVHRA 96
Query: 1005 LVTEQQNQRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRD 826
L+T++QN RRGTASTLTRGEVRGGG+KPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRD
Sbjct: 97 LITDRQNARRGTASTLTRGEVRGGGRKPYGQKKTGKARRGSVRTPLRPGGGVIFGPKPRD 156
Query: 825 WSVKINRKEKRXXXXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRK 646
W++KINRKEKR +FVV++F++EF TGP+T+DFVAAL+RWGLDP+ K
Sbjct: 157 WTIKINRKEKRLAISTALASAAVANDSFVVQEFDEEFATGPRTRDFVAALQRWGLDPREK 216
Query: 645 AMFLMTEVSDNVLLSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
AMF TE+ DNV S RN+GT+K+LTPR LNL+DILD+ K T +A+EYLNS Y
Sbjct: 217 AMFFSTELDDNVRPSGRNIGTLKMLTPRTLNLYDILDARKHFFTPAAIEYLNSRY 271
>ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform X1
[Glycine max] gi|571465968|ref|XP_006583523.1| PREDICTED:
50S ribosomal protein L4, chloroplastic-like isoform X2
[Glycine max]
Length = 303
Score = 294 bits (753), Expect = 5e-77
Identities = 150/231 (64%), Positives = 180/231 (77%)
Frame = -2
Query: 1173 SHPFPNLSLTKHLRLAVRCDVAALPVLSFSGNKVGEVPLSLKSAPAETSRAIVHRGLVTE 994
++ FP L K L ++ + LPVL+FSG +VGE L L+SAP +T+RA+VHR +VT+
Sbjct: 35 NNKFPILPSKKPLSISCKAS-PPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTD 93
Query: 993 QQNQRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSVK 814
QN+RRGTASTLTRGEVRGGG+KP+PQKKTGRARRGS RTPLRPGGGVVFGPKPRDWS+K
Sbjct: 94 LQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 153
Query: 813 INRKEKRXXXXXXXXXXXXXXXAFVVEDFEQEFETGPKTKDFVAALRRWGLDPKRKAMFL 634
INRKEKR A VVEDF EF PKTK+F+AA++RWGLDPK KAMFL
Sbjct: 154 INRKEKR--LAISTAVASAAASAVVVEDFATEFAEKPKTKEFIAAMKRWGLDPKEKAMFL 211
Query: 633 MTEVSDNVLLSCRNLGTIKLLTPRMLNLFDILDSEKLVLTKSAVEYLNSTY 481
MTEV +NV LS RN+GT+K+ TPR LNL+DILD++KLVLT+ AV+YLN Y
Sbjct: 212 MTEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRY 262