BLASTX nr result

ID: Zingiber24_contig00016577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00016577
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853548.1| hypothetical protein AMTR_s00032p00233900 [A...    67   2e-09
ref|XP_006439353.1| hypothetical protein CICLE_v10020194mg [Citr...    59   9e-07
ref|XP_006476388.1| PREDICTED: mitochondrial inner membrane prot...    58   1e-06

>ref|XP_006853548.1| hypothetical protein AMTR_s00032p00233900 [Amborella trichopoda]
           gi|548857201|gb|ERN15015.1| hypothetical protein
           AMTR_s00032p00233900 [Amborella trichopoda]
          Length = 240

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/93 (44%), Positives = 49/93 (52%)
 Frame = -3

Query: 290 KRPPVRKFLNLPEVVPQPQPAGGNFSFFGTSKQTEPVALSTTAEAASPVFPPRVMVPEQS 111
           KRPPV+KFL LP++VP    +  NF FF T               +    PP     E  
Sbjct: 160 KRPPVKKFLGLPDMVPDAAASRINFPFFQTP--------------SGGPSPPGPAPFETQ 205

Query: 110 RTSEKKIYSSSAISHRIRNLEKTVKARNKTKKR 12
              EK++ SSS IS RIRNLE+TVK R K KKR
Sbjct: 206 PFPEKRVSSSSVISQRIRNLERTVKGRKKNKKR 238


>ref|XP_006439353.1| hypothetical protein CICLE_v10020194mg [Citrus clementina]
           gi|557541615|gb|ESR52593.1| hypothetical protein
           CICLE_v10020194mg [Citrus clementina]
          Length = 436

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = -3

Query: 290 KRPPVRKFLNLPE--VVPQPQPAGGNFSFFGTSKQTEPVALSTTAEAASPVFPPRVMVPE 117
           K P V+K L +PE  VV Q      +FS F   KQ      +  A A+        +  E
Sbjct: 350 KVPGVKKMLGVPEIPVVQQTTDPKPSFSLFSAIKQASEAKAARQASAS--------VTAE 401

Query: 116 QSRTSEKKIYSSSAISHRIRNLEKTVKARNKTKKR 12
           Q +++E+KI SS+ +S RIR+LEK VK R K KKR
Sbjct: 402 QPKSTEQKISSSAVLSQRIRSLEKQVKGRKKNKKR 436


>ref|XP_006476388.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Citrus
           sinensis]
          Length = 436

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = -3

Query: 290 KRPPVRKFLNLPE--VVPQPQPAGGNFSFFGTSKQTEPVALSTTAEAASPVFPPRVMVPE 117
           K P V+K L +PE  VV Q      +FS F   KQ      +  A A+        +  E
Sbjct: 350 KVPGVKKMLGVPEIPVVRQTTDPKPSFSLFSAIKQASEAKAARQASAS--------VTAE 401

Query: 116 QSRTSEKKIYSSSAISHRIRNLEKTVKARNKTKKR 12
           Q +++E+KI SS+ +S RIR+LEK VK R K KKR
Sbjct: 402 QPKSTEQKISSSAVLSQRIRSLEKQVKGRKKNKKR 436


Top