BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00016520
         (1072 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448222.1| hypothetical protein SORBIDRAFT_06g023430 [S...   144   8e-32
ref|XP_004953239.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   140   1e-30
gb|ACN25943.1| unknown [Zea mays] gi|413919011|gb|AFW58943.1| pu...   136   1e-29
ref|NP_001152715.1| ring domain containing protein [Zea mays] gi...   136   1e-29
gb|EMT31923.1| RING finger protein 185 [Aegilops tauschii]            135   2e-29
ref|XP_003580198.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   132   2e-28
ref|NP_001130966.1| uncharacterized LOC100192071 [Zea mays] gi|1...   130   7e-28
ref|XP_006652556.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   130   1e-27
ref|XP_006652555.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   130   1e-27
ref|XP_004976324.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   129   2e-27
ref|NP_001053390.1| Os04g0530500 [Oryza sativa Japonica Group] g...   129   2e-27
ref|NP_001047542.1| Os02g0639800 [Oryza sativa Japonica Group] g...   129   3e-27
gb|AFW72516.1| putative RING zinc finger domain superfamily prot...   127   1e-26
gb|EMS47983.1| E3 ubiquitin-protein ligase RMA3 [Triticum urartu]     120   7e-25
ref|XP_006467807.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   119   2e-24
ref|XP_003572751.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   119   2e-24
ref|XP_002454235.1| hypothetical protein SORBIDRAFT_04g027250 [S...   119   3e-24
ref|XP_006449331.1| hypothetical protein CICLE_v10016469mg [Citr...   116   2e-23
ref|XP_006304178.1| hypothetical protein CARUB_v10010212mg [Caps...   114   7e-23
ref|XP_006416519.1| hypothetical protein EUTSA_v10008430mg [Eutr...   114   9e-23

>ref|XP_002448222.1| hypothetical protein SORBIDRAFT_06g023430 [Sorghum bicolor]
           gi|241939405|gb|EES12550.1| hypothetical protein
           SORBIDRAFT_06g023430 [Sorghum bicolor]
          Length = 260

 Score =  144 bits (362), Expect = 8e-32
 Identities = 91/254 (35%), Positives = 122/254 (48%), Gaps = 52/254 (20%)
 Frame = +1

Query: 295 MEAEYVPEPFSTDACMVSSTMDKPRDGDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDP 474
           MEA  V +P     CM ++T  +P   D           PVT  SGCFDC+ICLD   +P
Sbjct: 1   MEAGRVDQP-----CM-AATNSQPFVADIEPVKKASGDMPVTTGSGCFDCNICLDFAAEP 54

Query: 475 VVTLCGHLFCWPCIYKWMQA---------KSMSNQQCPVCKAFLSQDTIVPLFGRGRDSG 627
           VVTLCGHL+CWPCIY+W++           S + +QCPVCKA LS DT+VPL+GRG DS 
Sbjct: 55  VVTLCGHLYCWPCIYEWLRPGVESTASDNSSSARRQCPVCKATLSTDTLVPLYGRGGDSK 114

Query: 628 AKVAS-GVPLRPAMNFNRNNSARNLAPESQFRHHVNDSIADNSS----------PLMTD- 771
               S  +P RP +  +R    +  A  +    H + S+ DN            P+ T  
Sbjct: 115 KSPNSIAIPRRPMV--HRETVEQQNAQSNANDQHYHQSMEDNPQHRPLPHAQHYPIPTGL 172

Query: 772 ---------------------IGGLAIAVLPW----------FHSRQYALTLSGNNPRLQ 858
                                +GG+A  VLPW          ++   Y +     NPRL+
Sbjct: 173 DFIYPPAPVGRGLIHSTAGGVLGGMAEVVLPWAFRGQLPASLYYMSPYHVATQNMNPRLR 232

Query: 859 RQQLQVVNSLHQIW 900
           R Q+++  SLHQIW
Sbjct: 233 RHQMELERSLHQIW 246


>ref|XP_004953239.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1
           [Setaria italica] gi|514715415|ref|XP_004953240.1|
           PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
           isoform X2 [Setaria italica]
           gi|514715419|ref|XP_004953241.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1-like isoform X3 [Setaria
           italica]
          Length = 252

 Score =  140 bits (352), Expect = 1e-30
 Identities = 85/222 (38%), Positives = 115/222 (51%), Gaps = 46/222 (20%)
 Frame = +1

Query: 373 GDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWMQ------A 534
           GD PA       AP     GCFDC+ICL+   +PVVTLCGHL+CWPCIY+W++      A
Sbjct: 18  GDEPAKRVVGGDAPAATGGGCFDCNICLECAAEPVVTLCGHLYCWPCIYEWLRPDADADA 77

Query: 535 KSMSNQQCPVCKAFLSQDTIVPLFGRGRDSGAK------VASGVPLRPAM---------- 666
            S + ++CPVCKA +S D +VPL+GRG  S AK      +AS +P RPA+          
Sbjct: 78  GSSARRRCPVCKAAVSPDALVPLYGRGGSSRAKKPPPRGLASSIPRRPALRQQSARGSDN 137

Query: 667 -----NFNRNNSARNLAPESQFRHHVNDSIADNSSP-------LMTD-----IGGLAIAV 795
                + N    A   AP+ Q RHH + +  D   P       +M       +G +A+AV
Sbjct: 138 GGGHHHRNVETDAPARAPQ-QARHHADAARFDALLPPPFVDRGIMHSTAGGVLGSMAVAV 196

Query: 796 LPWFHSRQ-------YALTLSGNNPRLQRQQLQVVNSLHQIW 900
           LPW    Q       Y+      NPR +R+ +++  SLHQIW
Sbjct: 197 LPWVLRGQAQAPGMHYSSPYHLMNPRQRRRHMELERSLHQIW 238


>gb|ACN25943.1| unknown [Zea mays] gi|413919011|gb|AFW58943.1| putative RING zinc
           finger domain superfamily protein isoform 1 [Zea mays]
           gi|413919012|gb|AFW58944.1| putative RING zinc finger
           domain superfamily protein isoform 2 [Zea mays]
          Length = 261

 Score =  136 bits (343), Expect = 1e-29
 Identities = 89/252 (35%), Positives = 115/252 (45%), Gaps = 57/252 (22%)
 Frame = +1

Query: 316 EPFSTDACMVSSTMDKPRDGDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDPVVTLCGH 495
           +PF  D   V     K   GD PA  T          SGCFDC+ICLD   +PVVTLCGH
Sbjct: 17  QPFVADTEPV-----KKASGDMPAAPTG---------SGCFDCNICLDFAAEPVVTLCGH 62

Query: 496 LFCWPCIYKWMQA---------KSMSNQQCPVCKAFLSQDTIVPLFGRGRDSGAKV-ASG 645
           L+CWPCIY+W++           S + +QCPVCKA LS DT+VPL+GRG  S   +    
Sbjct: 63  LYCWPCIYEWLRPGVESTASDNGSSARRQCPVCKATLSPDTLVPLYGRGGSSKKSLDGMA 122

Query: 646 VPLRPAMNFNRNNSARNLAPESQFRHHVNDSIADNSS-------PLMTD----------- 771
           +P RP ++       R    +   R HVND     S+       PLM             
Sbjct: 123 IPRRPMVH-------REAVEQQNARSHVNDQHYHQSTGDSPQHQPLMQAHHHPVPPGFDF 175

Query: 772 -------------------IGGLAIAVLPW----------FHSRQYALTLSGNNPRLQRQ 864
                              +GG+A  VLPW           ++  Y +     NPRL+RQ
Sbjct: 176 IYPPAPVGRGLIHSTAGGVLGGMAEVVLPWVLRGQLPASLHYTSPYHVAAQNVNPRLRRQ 235

Query: 865 QLQVVNSLHQIW 900
           Q+++  SLHQIW
Sbjct: 236 QMEIERSLHQIW 247


>ref|NP_001152715.1| ring domain containing protein [Zea mays]
           gi|195659279|gb|ACG49107.1| ring domain containing
           protein [Zea mays]
          Length = 256

 Score =  136 bits (343), Expect = 1e-29
 Identities = 89/252 (35%), Positives = 115/252 (45%), Gaps = 57/252 (22%)
 Frame = +1

Query: 316 EPFSTDACMVSSTMDKPRDGDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDPVVTLCGH 495
           +PF  D   V     K   GD PA  T          SGCFDC+ICLD   +PVVTLCGH
Sbjct: 12  QPFVADTEPV-----KKASGDMPAAPTG---------SGCFDCNICLDFAAEPVVTLCGH 57

Query: 496 LFCWPCIYKWMQA---------KSMSNQQCPVCKAFLSQDTIVPLFGRGRDSGAKV-ASG 645
           L+CWPCIY+W++           S + +QCPVCKA LS DT+VPL+GRG  S   +    
Sbjct: 58  LYCWPCIYEWLRPGVESTASDNGSSARRQCPVCKATLSPDTLVPLYGRGGSSKKSLDGMA 117

Query: 646 VPLRPAMNFNRNNSARNLAPESQFRHHVNDSIADNSS-------PLMTD----------- 771
           +P RP ++       R    +   R HVND     S+       PLM             
Sbjct: 118 IPRRPMVH-------REAVEQQNARSHVNDQHYHQSTGDSPQHQPLMQAHHHPVPPGFDF 170

Query: 772 -------------------IGGLAIAVLPW----------FHSRQYALTLSGNNPRLQRQ 864
                              +GG+A  VLPW           ++  Y +     NPRL+RQ
Sbjct: 171 IYPPAPVGRGLIHSTAGGVLGGMAEVVLPWVLRGQLPASLHYTSPYHVAAQNVNPRLRRQ 230

Query: 865 QLQVVNSLHQIW 900
           Q+++  SLHQIW
Sbjct: 231 QMEIERSLHQIW 242


>gb|EMT31923.1| RING finger protein 185 [Aegilops tauschii]
          Length = 258

 Score =  135 bits (341), Expect = 2e-29
 Identities = 88/242 (36%), Positives = 116/242 (47%), Gaps = 54/242 (22%)
 Frame = +1

Query: 337 CMVSSTMDKPRDGDPPACNTQDDT-APVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPC 513
           CM + T   P   +    N   +  +  T  SG FDC+ICLD   DPVVTLCGHL+CWPC
Sbjct: 5   CMAAMTNQPPVSDNKLMKNISGEIPSAATAGSGSFDCNICLDFAADPVVTLCGHLYCWPC 64

Query: 514 IYKWMQAKSMS---------NQQCPVCKAFLSQDTIVPLFGRGRDSGAKV-ASGVPLRPA 663
           IY+W++   +S          QQCPVCKA LS D++VPL+GRG  S   +  + +P RP 
Sbjct: 65  IYEWLRPLVVSASGANSTSARQQCPVCKAALSADSLVPLYGRGGSSKKSLDGTAIPRRPT 124

Query: 664 MNFNRNNSARNLAPES--QFRHHVNDSIADNSSPLMTD---------------------- 771
           ++  R N A   A  S    RHH N   +    PL                         
Sbjct: 125 VH--RENVAHQHAQSSIDDNRHHHNVEPSPPLRPLRHAHHHHPGATEFDFVYPPSPMGRG 182

Query: 772 ---------IGGLAIAVLPW----------FHSRQYALTLSGNNPRLQRQQLQVVNSLHQ 894
                    +GG+A AVLPW          +++  YA+      PRL+RQQ++V  SLHQ
Sbjct: 183 LIHSTAGGVLGGMAEAVLPWAFRGQVPPSMYYTSPYAVADHTVGPRLRRQQMEVERSLHQ 242

Query: 895 IW 900
           IW
Sbjct: 243 IW 244


>ref|XP_003580198.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Brachypodium
           distachyon]
          Length = 259

 Score =  132 bits (332), Expect = 2e-28
 Identities = 85/237 (35%), Positives = 112/237 (47%), Gaps = 49/237 (20%)
 Frame = +1

Query: 337 CMVSSTMDKPRDGDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCI 516
           CM +         D P  N   +  P    SG FDC+ICLD   DPVVTLCGHL+CWPCI
Sbjct: 10  CMAAINSQPSVSDDKPMKNISGEM-PAAAGSGSFDCNICLDFAADPVVTLCGHLYCWPCI 68

Query: 517 YKWMQA---------KSMSNQQCPVCKAFLSQDTIVPLFGRGRDSGAKV-ASGVPLRPAM 666
           Y+W+Q          +S + QQCPVCKA LS D++VPL+GRG  S   +    +P RP +
Sbjct: 69  YEWLQPAAESASSNNRSSARQQCPVCKATLSADSLVPLYGRGGSSKKSLDGMAIPRRPMV 128

Query: 667 ---NFNRNNSARN--------------LAPESQFRHHVNDSIAD---NSSPLMTDI---- 774
              N   +++  N              L P     HH   +  D     SPL   +    
Sbjct: 129 HRENAEHHHTQSNIDDRHHQNMEPRPLLRPLRHAHHHSGATEFDFIHPPSPLGRGLIHST 188

Query: 775 -----GGLAIAVLP----------WFHSRQYALTLSGNNPRLQRQQLQVVNSLHQIW 900
                GG+A AVLP           +++  Y +      PRL+RQQ++V  SLH IW
Sbjct: 189 AGGVLGGMAEAVLPSAFRGQLPPSMYYTSPYYIAAHNMGPRLRRQQMEVERSLHHIW 245


>ref|NP_001130966.1| uncharacterized LOC100192071 [Zea mays] gi|194690576|gb|ACF79372.1|
           unknown [Zea mays] gi|195626014|gb|ACG34837.1| ring
           domain containing protein [Zea mays]
           gi|238013336|gb|ACR37703.1| unknown [Zea mays]
           gi|414586142|tpg|DAA36713.1| TPA: putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 261

 Score =  130 bits (328), Expect = 7e-28
 Identities = 83/254 (32%), Positives = 119/254 (46%), Gaps = 52/254 (20%)
 Frame = +1

Query: 295 MEAEYVPEPFSTDACMVSSTMDKPRDGDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDP 474
           MEA  + +PF      +++   +P   D           P T  SGCF+C+ICLD   +P
Sbjct: 1   MEAGRMDQPF------MAAINSQPFVEDIEPVKKASGDMPATTGSGCFECNICLDFASEP 54

Query: 475 VVTLCGHLFCWPCIYKWMQA---------KSMSNQQCPVCKAFLSQDTIVPLFGRGRDSG 627
           VVT CGHL+CWPCIY+W++           S + +QCPVCKA LS DT+VPL+GRG +S 
Sbjct: 55  VVTFCGHLYCWPCIYEWLRPGVESAASDNSSSARRQCPVCKATLSTDTLVPLYGRGGNSK 114

Query: 628 AKV-ASGVPLRPAMNFNRNNSARNLAPESQFRHHVNDSIADNSS----------PLMTD- 771
             +    +P RP ++       +N A  +    H + S+ DNS           P+ T  
Sbjct: 115 KSLDGMAIPRRPMVHRETVEEQQN-AQSNVNDQHYHQSMEDNSQRQPLLQAHHHPIPTGF 173

Query: 772 ---------------------IGGLAIAVLP----------WFHSRQYALTLSGNNPRLQ 858
                                +GG+A  VLP           +++  Y       NPRL+
Sbjct: 174 DFIYPPAPVGRGLIHSTAGGVLGGMAEIVLPLALRGQMPASLYYTNPYHAATQNVNPRLR 233

Query: 859 RQQLQVVNSLHQIW 900
           R Q+++  SLHQIW
Sbjct: 234 RHQMEIERSLHQIW 247


>ref|XP_006652556.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X2
           [Oryza brachyantha]
          Length = 253

 Score =  130 bits (326), Expect = 1e-27
 Identities = 82/214 (38%), Positives = 105/214 (49%), Gaps = 51/214 (23%)
 Frame = +1

Query: 412 PVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWMQA---------KSMSNQQCPV 564
           PVT  + CFDC+ICLD   +PVVTLCGHL+CWPCIY+W++          +S S +QCPV
Sbjct: 29  PVTAGNACFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTASNNRSSSRRQCPV 88

Query: 565 CKAFLSQDTIVPLFGRGRDSGAKVASGV--PLRPAMNFNRNNSARNLAPESQFRHHVNDS 738
           CKA LS D +VPL+GRG  S  K  +GV  P RP +        +N       RHH N  
Sbjct: 89  CKATLSPDMLVPLYGRG-GSLKKSLNGVAIPRRPTVK-REAVEHQNTQNSINDRHHQNME 146

Query: 739 IADNSSPLMTD------------------------------IGGLAIAVLPW-------- 804
            +    PL                                 +GG+A+AVLPW        
Sbjct: 147 PSPPLHPLRQSNHNSSATEFDFIYPPSPMGRGLIHSTAGGVLGGMAVAVLPWAFRGQVPP 206

Query: 805 --FHSRQYALTLSGNNPRLQRQQLQVVNSLHQIW 900
             F S  Y +T    + R +RQQ++V  SLHQIW
Sbjct: 207 SMFMSPHY-VTAHNMSSRARRQQMEVERSLHQIW 239


>ref|XP_006652555.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1
           [Oryza brachyantha]
          Length = 270

 Score =  130 bits (326), Expect = 1e-27
 Identities = 82/214 (38%), Positives = 105/214 (49%), Gaps = 51/214 (23%)
 Frame = +1

Query: 412 PVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWMQA---------KSMSNQQCPV 564
           PVT  + CFDC+ICLD   +PVVTLCGHL+CWPCIY+W++          +S S +QCPV
Sbjct: 46  PVTAGNACFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTASNNRSSSRRQCPV 105

Query: 565 CKAFLSQDTIVPLFGRGRDSGAKVASGV--PLRPAMNFNRNNSARNLAPESQFRHHVNDS 738
           CKA LS D +VPL+GRG  S  K  +GV  P RP +        +N       RHH N  
Sbjct: 106 CKATLSPDMLVPLYGRG-GSLKKSLNGVAIPRRPTVK-REAVEHQNTQNSINDRHHQNME 163

Query: 739 IADNSSPLMTD------------------------------IGGLAIAVLPW-------- 804
            +    PL                                 +GG+A+AVLPW        
Sbjct: 164 PSPPLHPLRQSNHNSSATEFDFIYPPSPMGRGLIHSTAGGVLGGMAVAVLPWAFRGQVPP 223

Query: 805 --FHSRQYALTLSGNNPRLQRQQLQVVNSLHQIW 900
             F S  Y +T    + R +RQQ++V  SLHQIW
Sbjct: 224 SMFMSPHY-VTAHNMSSRARRQQMEVERSLHQIW 256


>ref|XP_004976324.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Setaria
           italica]
          Length = 405

 Score =  129 bits (325), Expect = 2e-27
 Identities = 89/256 (34%), Positives = 120/256 (46%), Gaps = 54/256 (21%)
 Frame = +1

Query: 295 MEAEYVPEPFSTDACMVSSTMDKPRDGDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDP 474
           MEA  + +P     CM +    +P   D  A        P TM SGCFDC+ICLD   +P
Sbjct: 147 MEAGRMDQP-----CMAAIN-SQPLVADVEAVKKSSGDMPTTMGSGCFDCNICLDFAAEP 200

Query: 475 VVTLCGHLFCWPCIYKWMQA---------KSMSNQQCPVCKAFLSQDTIVPLFGRGRDSG 627
           VVTLCGHL+CWPCIY+W++           S + +QCPVCKA LS DT+VPL+GRG  S 
Sbjct: 201 VVTLCGHLYCWPCIYEWLRPGVESTASDNSSSARRQCPVCKATLSPDTLVPLYGRG-GSS 259

Query: 628 AKVASGV--PLRPAMN---FNRNNSARNLAPESQFRHHVNDSIADNSSPLMTD------- 771
            K  +GV  P RP ++       N+  N+  +   +HH +        PL          
Sbjct: 260 KKSLNGVAIPRRPMVHRETVEHQNAQSNVDDQ---QHHQSMEANPLHQPLQHAHYRPNPA 316

Query: 772 -----------------------IGGLAIAVLP----------WFHSRQYALTLSGNNPR 852
                                  +GG+A AVLP           +++  Y +     NPR
Sbjct: 317 GFDFIYPPAPLGRGLIHSTAGGVLGGMAEAVLPLVLRGQLPASLYYTSPYHVAAQNVNPR 376

Query: 853 LQRQQLQVVNSLHQIW 900
            QR+ L++  SLHQIW
Sbjct: 377 -QRRHLEIERSLHQIW 391


>ref|NP_001053390.1| Os04g0530500 [Oryza sativa Japonica Group]
           gi|38346627|emb|CAE02141.2| OSJNBa0074L08.21 [Oryza
           sativa Japonica Group] gi|38346758|emb|CAE03863.2|
           OSJNBa0081C01.9 [Oryza sativa Japonica Group]
           gi|90399374|emb|CAH68386.1| B1011H02.2 [Oryza sativa
           Indica Group] gi|113564961|dbj|BAF15304.1| Os04g0530500
           [Oryza sativa Japonica Group]
           gi|116312030|emb|CAJ86386.1| OSIGBa0155K17.13 [Oryza
           sativa Indica Group] gi|125549120|gb|EAY94942.1|
           hypothetical protein OsI_16747 [Oryza sativa Indica
           Group] gi|125591077|gb|EAZ31427.1| hypothetical protein
           OsJ_15560 [Oryza sativa Japonica Group]
           gi|215697920|dbj|BAG92115.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737491|dbj|BAG96621.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 253

 Score =  129 bits (325), Expect = 2e-27
 Identities = 82/213 (38%), Positives = 108/213 (50%), Gaps = 50/213 (23%)
 Frame = +1

Query: 412 PVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWM---------QAKSMSNQQCPV 564
           PVT  + CFDC+ICLD   +PVVTLCGHL+CWPCIY+W+            S++ +QCPV
Sbjct: 29  PVTAGNACFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLCPGVGSTASNNSSLARRQCPV 88

Query: 565 CKAFLSQDTIVPLFGRGRDSGAKVASGVPL--RPAMN---FNRNNSARNL---------- 699
           CKA LS D +VPL+GRG  S  K  +GVP+  RP +        N+  N+          
Sbjct: 89  CKATLSPDMLVPLYGRG-GSLKKSLNGVPIPRRPTVQREAVEHQNTHNNIDDRHHENMEP 147

Query: 700 -APESQFRHHVNDSIADN------SSPLMTD---------IGGLAIAVLPW--------- 804
             P    RH  + S A         SP+            +GG+A+AVLPW         
Sbjct: 148 SPPPQPLRHSSHHSSATEFDFIYPPSPIGRGLIHSTAGGVLGGMAVAVLPWAFRGQVPPS 207

Query: 805 -FHSRQYALTLSGNNPRLQRQQLQVVNSLHQIW 900
            F S  Y +T    + R +R Q++V  SLHQIW
Sbjct: 208 MFMSPHY-VTAHNMSSRARRHQMEVERSLHQIW 239


>ref|NP_001047542.1| Os02g0639800 [Oryza sativa Japonica Group]
           gi|49388234|dbj|BAD25354.1| ring domain containing
           protein-like [Oryza sativa Japonica Group]
           gi|113537073|dbj|BAF09456.1| Os02g0639800 [Oryza sativa
           Japonica Group] gi|125583017|gb|EAZ23948.1| hypothetical
           protein OsJ_07675 [Oryza sativa Japonica Group]
           gi|215701324|dbj|BAG92748.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740985|dbj|BAG97480.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 286

 Score =  129 bits (323), Expect = 3e-27
 Identities = 82/254 (32%), Positives = 111/254 (43%), Gaps = 78/254 (30%)
 Frame = +1

Query: 373 GDPPACNTQDDT---------APVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKW 525
           GD PA   + +          A      GCFDC+ICLD   +PVVTLCGHL+CWPCIY+W
Sbjct: 19  GDEPAVRVRGEVEAEAAAAAAAAEAQGGGCFDCNICLDFATEPVVTLCGHLYCWPCIYEW 78

Query: 526 M-----------QAKSMSNQQCPVCKAFLSQDTIVPLFGRGRDSGAKVA---SGVPLRPA 663
           +            A S   + CPVCKA +S DT+VPL+GRGR   +K A   S +P RP 
Sbjct: 79  LHPGGDDDGSNGDASSTRRRPCPVCKAAVSPDTLVPLYGRGRGGSSKRARSGSAIPRRPI 138

Query: 664 M---------------NFNRNNSARNLAPESQFRHHVNDSIADNSSPLMTD--------- 771
           +               +    + +   +P  +   H N   A  S+P             
Sbjct: 139 VHREPVERQSDRLGDDDGGHRHGSTGSSPPVRSPWHANHHAAAASTPAPAPARLFDVVYP 198

Query: 772 ----------------------IGGLAIAVLPWFHSRQYALTLSGN---------NPRLQ 858
                                 +GG+A+AVLPW    Q   T + +         +PRL+
Sbjct: 199 PPPAAVGGVGMFHSTTTTTGGMLGGMALAVLPWVSRGQSPATAAASAYYTSPYHMSPRLR 258

Query: 859 RQQLQVVNSLHQIW 900
           RQ ++V  SLHQIW
Sbjct: 259 RQHMEVERSLHQIW 272


>gb|AFW72516.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 255

 Score =  127 bits (318), Expect = 1e-26
 Identities = 80/221 (36%), Positives = 107/221 (48%), Gaps = 45/221 (20%)
 Frame = +1

Query: 373 GDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWMQ------- 531
           GD PA  T          SGCFDC+ICL+   +PVVTLCGHL+CWPCIY+W++       
Sbjct: 29  GDAPASGTSG--------SGCFDCNICLECATEPVVTLCGHLYCWPCIYEWLRHDVAEAG 80

Query: 532 AKSMSNQQCPVCKAFLSQDTIVPLFGRGRDSGAK---VASGVPLRPAMNFNRNNS----- 687
           A+S + +QCPVCKA +S D +VPL+GRG  S AK    +   P RPA+  + ++S     
Sbjct: 81  ARSSARRQCPVCKAAVSPDALVPLYGRGGSSSAKKPLASIPRPRRPALRQSTHDSGSGGH 140

Query: 688 ------ARNLAPESQFRHHVNDSIADNSSPLMTD-----------------IGGLAIAVL 798
                 A    P    RH  +   A   + L                    +GG+A+AVL
Sbjct: 141 HHHHRHAETSTPARSLRHPAHAHAAQFDALLSAPFGDRGMLHSTTSTTGGMLGGMAVAVL 200

Query: 799 PWFHSRQ-------YALTLSGNNPRLQRQQLQVVNSLHQIW 900
           P     Q       Y       +PR +R  ++V  SLHQIW
Sbjct: 201 PLVLRGQARVPGMYYPSPYHLMSPRQRRWHVEVERSLHQIW 241


>gb|EMS47983.1| E3 ubiquitin-protein ligase RMA3 [Triticum urartu]
          Length = 433

 Score =  120 bits (302), Expect = 7e-25
 Identities = 81/228 (35%), Positives = 106/228 (46%), Gaps = 54/228 (23%)
 Frame = +1

Query: 352 TMDKPRDGDPPACNTQDDT-APVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWM 528
           T   P   + P  N   +  A  T  SG FDC+ICLD   DPVVTLCGHL+CWPCIY+W+
Sbjct: 2   TNQPPVSDNKPMKNISGEMPAAATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWL 61

Query: 529 QAKSMS---------NQQCPVCKAFLSQDTIVPLFGRGRDSGAKV-ASGVPLRPAMNFNR 678
           +   +S          QQCPVCKA LS D++VPL+GRG  S   +    +P RP +  +R
Sbjct: 62  RPSVVSASGANSTSARQQCPVCKAALSADSLVPLYGRGGSSKKSLDGMAIPRRPTV--HR 119

Query: 679 NNSARNLAPES--QFRHHVNDSIADNSSPLMTD--------------------------- 771
            N A   A  S    RHH N   +    PL                              
Sbjct: 120 ENVAHQHAQSSIDDDRHHHNVEPSPPLRPLRHAHHHHPGATEFDFVYPPSPMGRGLIHST 179

Query: 772 ----IGGLAIAVLPW----------FHSRQYALTLSGNNPRLQRQQLQ 873
               +GG+A AVLPW          +++  YA+      PRL+RQQ++
Sbjct: 180 AGGVLGGMAEAVLPWAFRGQVPPSMYYTSPYAVADHTLGPRLRRQQME 227


>ref|XP_006467807.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Citrus
           sinensis]
          Length = 240

 Score =  119 bits (299), Expect = 2e-24
 Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 44/201 (21%)
 Frame = +1

Query: 427 SGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWMQAKSMS-----NQQCPVCKAFLSQDT 591
           +GCFDC+ICLD   DPVVTLCGHL+CWPCIYKW+  +S S     + QCPVCKA +S  T
Sbjct: 25  NGCFDCNICLDFAYDPVVTLCGHLYCWPCIYKWLHVQSASLASDEHPQCPVCKADISHTT 84

Query: 592 IVPLFGRGRDSGAKVASG--------VPLRP------AMNFNRNNSARNLAPESQFR--- 720
           +VPL+GRG+        G        +P RP      A+ +  +N+ + L   + ++   
Sbjct: 85  MVPLYGRGQTPTESEPEGKVSHRGTVIPPRPPAFGNQALLYPTSNTGQQLPYRNPYQSQN 144

Query: 721 -----HHVNDSIADNSSPLMTDIGGLAIA-----VLPWFHSRQYALTLSG---------- 840
                 H       NS   + ++GG A++     V+  F    YA               
Sbjct: 145 YDPHGQHSYGGFEGNSPSPLLNLGGTALSGFQHPVVGMFGEMVYASVFGNSESLYTYPNS 204

Query: 841 --NNPRLQRQQLQVVNSLHQI 897
             +NPRL+R ++Q V SL++I
Sbjct: 205 YHSNPRLRRHEMQAVKSLNRI 225


>ref|XP_003572751.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Brachypodium
           distachyon]
          Length = 244

 Score =  119 bits (298), Expect = 2e-24
 Identities = 81/228 (35%), Positives = 112/228 (49%), Gaps = 39/228 (17%)
 Frame = +1

Query: 331 DACMVSSTMDKPR---DGDPPACNTQDDTAPVTMMSG-CFDCSICLDLVVDPVVTLCGHL 498
           D    +   DKP      D    +T  D  P T   G CFDC++CL+  V+PVVTLCGHL
Sbjct: 2   DQASTAGASDKPAAATSNDSWRRSTSGDVLPATAGGGGCFDCNVCLEFAVEPVVTLCGHL 61

Query: 499 FCWPCIYKWMQAKS-------MSNQQCPVCKAFLSQDTIVPLFGRGRDSGAK---VASGV 648
           +CWPCIY+W++ +         + Q CPVCKA L+ D+ VPL+GRG     K       +
Sbjct: 62  YCWPCIYEWLRRRGHADDRSVSTRQPCPVCKAALTLDSFVPLYGRGGVRPKKPRPCGPAI 121

Query: 649 PLRPAMNFN--RNNSARNLAPES--QFRHHVNDSIADNSSP-----------LMTDIGGL 783
           P RPA++       SA++   ES    R   +D+  D   P           + +  GG 
Sbjct: 122 PRRPAVHREAVEQRSAQHADTESDPSTRPPRDDAPLDVLYPPPPPLGRGMNVMHSASGGT 181

Query: 784 AIAVLPWF---------HSRQYALTLSGN-NPRLQRQQLQVVNSLHQI 897
           A+A L WF         +S  Y L    N +PRL+RQ ++V  SL +I
Sbjct: 182 ALAALTWFSRGEVPPPYYSSPYHLAAWENRSPRLRRQHMEVERSLREI 229


>ref|XP_002454235.1| hypothetical protein SORBIDRAFT_04g027250 [Sorghum bicolor]
           gi|241934066|gb|EES07211.1| hypothetical protein
           SORBIDRAFT_04g027250 [Sorghum bicolor]
          Length = 254

 Score =  119 bits (297), Expect = 3e-24
 Identities = 80/230 (34%), Positives = 113/230 (49%), Gaps = 49/230 (21%)
 Frame = +1

Query: 358 DKPRD--GDPPACNTQDDTAPVTMMS----GCFDCSICLDLVVDPVVTLCGHLFCWPCIY 519
           ++PR   G+ PA       AP          CFDC+ICL+   +PVVTLCGHL+CWPCIY
Sbjct: 11  EQPRGAPGEEPAKRVIGADAPAAAAGESGFDCFDCNICLECATEPVVTLCGHLYCWPCIY 70

Query: 520 KWMQ------AKSMSNQQCPVCKAFLSQDTIVPLFGRGRDSGA------KVASGVPLRPA 663
           +W++      A S + +QCPVCKA +S D + PL+GRG  S +      +  + +P RPA
Sbjct: 71  EWLRPDAEADAMSSARRQCPVCKAAVSPDALGPLYGRGGSSSSAKKPPPRGLASIPCRPA 130

Query: 664 M--------NFNRNNSARNLAPESQFRH----HVNDSIADNSSP-------LMTD----- 771
           +          + +  A   AP    RH    H + +  D   P       +M       
Sbjct: 131 LRQSAQDGGGHHHHRHAETDAPARTPRHPADAHAHAAQFDALLPTPFGGRGMMRSTAGGM 190

Query: 772 IGGLAIAVLPWFHSRQ-------YALTLSGNNPRLQRQQLQVVNSLHQIW 900
           +GG+A+AVLP     Q       Y+ T    +PR +R  ++V  SLHQIW
Sbjct: 191 LGGMAVAVLPMVLRGQAQPPAMHYSGTYHLMSPRQRRWHMEVERSLHQIW 240


>ref|XP_006449331.1| hypothetical protein CICLE_v10016469mg [Citrus clementina]
           gi|557551942|gb|ESR62571.1| hypothetical protein
           CICLE_v10016469mg [Citrus clementina]
          Length = 240

 Score =  116 bits (290), Expect = 2e-23
 Identities = 72/204 (35%), Positives = 102/204 (50%), Gaps = 47/204 (23%)
 Frame = +1

Query: 427 SGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWMQAKSMS-----NQQCPVCKAFLSQDT 591
           +GCFDC+ICLD   +PVVTLCGHL+CWPCIYKW+  +S S     + QCPVCKA +S  T
Sbjct: 25  NGCFDCNICLDFAYEPVVTLCGHLYCWPCIYKWLHVQSASLASDEHPQCPVCKADISHTT 84

Query: 592 IVPLFGRGRDSGAKVASG--------VPLRP------AMNFNRNNS-----------ARN 696
           +VPL+GRG+        G        +P RP      A+ +  +N+           ++N
Sbjct: 85  MVPLYGRGQTPTESEPEGKVSHRGTVIPPRPPAFGNQALLYPTSNTGQQRPYRNPYQSQN 144

Query: 697 LAPESQFRHHVNDSIADNSSPLMTDIGGLAIA-----VLPWFHSRQYALTLSG------- 840
             P  Q   H       NS   + ++GG A++     V+  F    YA            
Sbjct: 145 YDPHGQ---HSYGGFEGNSPSPLLNLGGTALSGFQHPVVGMFGEMVYASVFGNSESLYTY 201

Query: 841 -----NNPRLQRQQLQVVNSLHQI 897
                +NPRL+R ++Q V SL++I
Sbjct: 202 PNSYHSNPRLRRHEMQAVKSLNRI 225


>ref|XP_006304178.1| hypothetical protein CARUB_v10010212mg [Capsella rubella]
           gi|482572889|gb|EOA37076.1| hypothetical protein
           CARUB_v10010212mg [Capsella rubella]
          Length = 229

 Score =  114 bits (285), Expect = 7e-23
 Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 3/120 (2%)
 Frame = +1

Query: 376 DPPACNTQDDTAPVTMMSGCFDCSICLDLVVDPVVTLCGHLFCWPCIYKWMQAKSMSNQQ 555
           D P+C++ ++T+     SG F+C+ICLDL  DP+VTLCGHLFCWPC+YKW+   S S ++
Sbjct: 3   DAPSCSSGNNTSGND--SGNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQS-KE 59

Query: 556 CPVCKAFLSQDTIVPLFGRGRDSG---AKVASGVPLRPAMNFNRNNSARNLAPESQFRHH 726
           CPVCKA + +D +VPL+GRG+ S    +K   G+ +    +  R  +A+   P   F HH
Sbjct: 60  CPVCKAVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRPSGQRPETAQPPDPNHGFAHH 119


>ref|XP_006416519.1| hypothetical protein EUTSA_v10008430mg [Eutrema salsugineum]
           gi|557094290|gb|ESQ34872.1| hypothetical protein
           EUTSA_v10008430mg [Eutrema salsugineum]
          Length = 278

 Score =  114 bits (284), Expect = 9e-23
 Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
 Frame = +1

Query: 328 TDACMVSSTMDKPRDGDPPACNTQDDTAPVTMMSGCFDCSICLDLVVDPVVTLCGHLFCW 507
           T+  +V S  D P        N+ +D       SG F+C+ICLDL  DP+VTLCGHLFCW
Sbjct: 45  TEVFLVESMSDIPSCSSGNNSNSNND-------SGNFECNICLDLAQDPIVTLCGHLFCW 97

Query: 508 PCIYKWMQAKSMSNQQCPVCKAFLSQDTIVPLFGRGR---DSGAKVASGVPLRPAMNFNR 678
           PC+YKW+   S+S ++CPVCKA + +D +VPL+GRG+   D  +K   G+ +    +  R
Sbjct: 98  PCLYKWLHLHSLS-KECPVCKAVIEEDKLVPLYGRGKSSTDPRSKSIPGLEVPNRPSGQR 156

Query: 679 NNSARNLAPESQFRHH 726
             +A+   P   F HH
Sbjct: 157 PETAQPPEPNHGFAHH 172