BLASTX nr result
ID: Zingiber24_contig00016391
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00016391
(1108 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY04163.1| Peptidyl-tRNA hydrolase family protein isoform 3,... 356 8e-96
gb|EOY04161.1| Peptidyl-tRNA hydrolase family protein isoform 1 ... 356 8e-96
ref|XP_004968049.1| PREDICTED: chloroplastic group IIB intron sp... 355 2e-95
ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group] g... 354 4e-95
gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indi... 352 1e-94
ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron sp... 351 3e-94
gb|EMJ18952.1| hypothetical protein PRUPE_ppa010513mg [Prunus pe... 349 1e-93
ref|XP_002305823.1| peptidyl-tRNA hydrolase family protein [Popu... 346 1e-92
ref|XP_006645469.1| PREDICTED: chloroplastic group IIB intron sp... 345 2e-92
ref|XP_006482233.1| PREDICTED: chloroplastic group IIB intron sp... 345 2e-92
ref|XP_006357844.1| PREDICTED: chloroplastic group IIB intron sp... 344 4e-92
ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [S... 343 5e-92
gb|ACF83436.1| unknown [Zea mays] gi|413947310|gb|AFW79959.1| ch... 343 9e-92
ref|XP_004299957.1| PREDICTED: chloroplastic group IIB intron sp... 342 1e-91
ref|NP_001104963.1| chloroplastic group IIB intron splicing faci... 342 2e-91
ref|XP_006430750.1| hypothetical protein CICLE_v10012586mg [Citr... 340 6e-91
ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron sp... 339 1e-90
ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus c... 338 2e-90
ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron sp... 338 2e-90
gb|ESW11164.1| hypothetical protein PHAVU_008G007300g [Phaseolus... 338 3e-90
>gb|EOY04163.1| Peptidyl-tRNA hydrolase family protein isoform 3, partial
[Theobroma cacao]
Length = 222
Score = 356 bits (914), Expect = 8e-96
Identities = 169/211 (80%), Positives = 189/211 (89%)
Frame = +3
Query: 222 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 401
ASLPD N+ EYTPWLI GLGNPGNKYHGTRHNVGFEMID IS+ EGI LN+IQSKAL
Sbjct: 12 ASLPDNNDGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIALNTIQSKAL 71
Query: 402 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 581
IG+G+IGEVPILL KPQ+YMN+ GESVGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 72 IGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPK 131
Query: 582 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 761
GGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG+MDM+A+LLQKFS+ ER Q+D+ALEQ
Sbjct: 132 GGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERNQIDAALEQ 191
Query: 762 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
GV+AVRT+V GFS + RFNL QKYKYHKV
Sbjct: 192 GVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 222
>gb|EOY04161.1| Peptidyl-tRNA hydrolase family protein isoform 1 [Theobroma cacao]
gi|508712265|gb|EOY04162.1| Peptidyl-tRNA hydrolase
family protein isoform 1 [Theobroma cacao]
Length = 244
Score = 356 bits (914), Expect = 8e-96
Identities = 169/211 (80%), Positives = 189/211 (89%)
Frame = +3
Query: 222 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 401
ASLPD N+ EYTPWLI GLGNPGNKYHGTRHNVGFEMID IS+ EGI LN+IQSKAL
Sbjct: 34 ASLPDNNDGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIALNTIQSKAL 93
Query: 402 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 581
IG+G+IGEVPILL KPQ+YMN+ GESVGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 94 IGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPK 153
Query: 582 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 761
GGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG+MDM+A+LLQKFS+ ER Q+D+ALEQ
Sbjct: 154 GGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERNQIDAALEQ 213
Query: 762 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
GV+AVRT+V GFS + RFNL QKYKYHKV
Sbjct: 214 GVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 244
>ref|XP_004968049.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like isoform X1 [Setaria italica]
Length = 256
Score = 355 bits (910), Expect = 2e-95
Identities = 174/234 (74%), Positives = 203/234 (86%), Gaps = 4/234 (1%)
Frame = +3
Query: 165 TRRRHLLLPSRCNRFRR---AVASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVG 332
T RR + P R R R VAS+PDP P EYTPWLIAGLGNPGNKY+GTRHNVG
Sbjct: 25 THRRAVAAPLRRTRRPRLATVVASVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVG 82
Query: 333 FEMIDHISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVP 512
FEM+D I+R EGIT+N+IQSK+L+G+GSIGEVP+LLVKPQSYMNYSGE++GPLAAYYQVP
Sbjct: 83 FEMVDRIAREEGITMNTIQSKSLLGVGSIGEVPVLLVKPQSYMNYSGEAIGPLAAYYQVP 142
Query: 513 LRHILLMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMD 692
LRHILL+YD+MSLPNGVLR+QRKGGHG HNG+++VI HLD R+FPRL IGIG+PPG MD
Sbjct: 143 LRHILLVYDDMSLPNGVLRLQRKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMD 202
Query: 693 MRAFLLQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
RAFLLQKFS+EER+Q+D+ALEQGVDAVRTLV KGFS ++ RFNLVQKYK+H+V
Sbjct: 203 TRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHRV 256
>ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|75288538|sp|Q5ZCL8.1|CRS2_ORYSJ RecName:
Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=CRS2-like protein;
AltName: Full=Chloroplastic RNA splicing factor 2;
Flags: Precursor gi|53792159|dbj|BAD52792.1| putative
peptidyl-tRNA hydrolase [Oryza sativa Japonica Group]
gi|113531466|dbj|BAF03849.1| Os01g0132800 [Oryza sativa
Japonica Group] gi|215687059|dbj|BAG90905.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222617682|gb|EEE53814.1| hypothetical protein
OsJ_00257 [Oryza sativa Japonica Group]
Length = 259
Score = 354 bits (908), Expect = 4e-95
Identities = 176/236 (74%), Positives = 203/236 (86%), Gaps = 7/236 (2%)
Frame = +3
Query: 168 RRRHLLL----PSRCNRFRR---AVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHN 326
RRR LLL P R R RR VAS+PDP R EYTPWLIAGLGNPG+KYHGTRHN
Sbjct: 25 RRRRLLLSAAAPLRRTRLRRRIAVVASVPDPAARP-AEYTPWLIAGLGNPGSKYHGTRHN 83
Query: 327 VGFEMIDHISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQ 506
VGFEM+D I+R EGIT+N+IQSK+L+GIGSIGEVP+LLVKPQSY+NYSGE++GPLAAYYQ
Sbjct: 84 VGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQ 143
Query: 507 VPLRHILLMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGA 686
VPLRHIL+MYDEMSLPNGVLR+QRKGGHG HNG+++V+ LD R+ PRL IGIG+PPG
Sbjct: 144 VPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGK 203
Query: 687 MDMRAFLLQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
MD RAFLLQKFS+EER+Q+D+ALEQGVDAVRTLV KGFS ++ RFNLVQKYK+H V
Sbjct: 204 MDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259
>gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indica Group]
Length = 259
Score = 352 bits (904), Expect = 1e-94
Identities = 175/236 (74%), Positives = 203/236 (86%), Gaps = 7/236 (2%)
Frame = +3
Query: 168 RRRHLLL----PSRCNRFRR---AVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHN 326
RRR LLL P R R RR VAS+PDP R EYTPWLIAGLGNPG+KYHGTRHN
Sbjct: 25 RRRRLLLSAAAPLRRTRLRRRIAVVASVPDPAARP-AEYTPWLIAGLGNPGSKYHGTRHN 83
Query: 327 VGFEMIDHISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQ 506
VGFEM+D I+R EGIT+N+IQSK+L+GIGSIGEVP+LLVKPQSY+NYSGE++GPLAAYYQ
Sbjct: 84 VGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQ 143
Query: 507 VPLRHILLMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGA 686
VPLRHIL+MYDEMSLPNGVLR+QRKGGHG HNG+++V+ LD R+ PRL IGIG+PPG
Sbjct: 144 VPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGK 203
Query: 687 MDMRAFLLQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
MD RAFLLQKFS+EE++Q+D+ALEQGVDAVRTLV KGFS ++ RFNLVQKYK+H V
Sbjct: 204 MDTRAFLLQKFSSEEQLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259
>ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like [Brachypodium distachyon]
Length = 369
Score = 351 bits (901), Expect = 3e-94
Identities = 170/229 (74%), Positives = 198/229 (86%), Gaps = 1/229 (0%)
Frame = +3
Query: 171 RRHLLLPSRCNRFR-RAVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMID 347
RR L S R R VAS+PDP R EYTPWLIAGLGNPG KYHGTRHNVGFEM+D
Sbjct: 142 RRRALTASPPRRTRLTVVASVPDPAARP-AEYTPWLIAGLGNPGGKYHGTRHNVGFEMVD 200
Query: 348 HISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHIL 527
I++ EGI +N+IQSK+L+G+GSIGEVP+LLVKPQSYMNY GE++GPLAAYYQVPLRHIL
Sbjct: 201 RIAQVEGIVMNTIQSKSLLGVGSIGEVPVLLVKPQSYMNYCGEAIGPLAAYYQVPLRHIL 260
Query: 528 LMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFL 707
++YDEMSLPNGVLR+QRKGGHG HNG+++VI HLD CR+FPRL IGIG+PPG MD RAFL
Sbjct: 261 VIYDEMSLPNGVLRLQRKGGHGRHNGLQNVIEHLDGCREFPRLSIGIGSPPGKMDTRAFL 320
Query: 708 LQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
LQKFS+EER+Q+D ALEQGVDAVRTLV KGFS ++ RFNLVQKYK+++V
Sbjct: 321 LQKFSSEERVQIDIALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFNRV 369
>gb|EMJ18952.1| hypothetical protein PRUPE_ppa010513mg [Prunus persica]
Length = 247
Score = 349 bits (896), Expect = 1e-93
Identities = 162/211 (76%), Positives = 187/211 (88%)
Frame = +3
Query: 222 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 401
ASLP+ N EYTPWLI GLGNPGNKYHGTRHN+GFEMID I++ +G+ +N+IQSKAL
Sbjct: 37 ASLPENNNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDSIAKTQGVVMNTIQSKAL 96
Query: 402 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 581
+GIGSIGEVPILL KPQ+YMNYSGESVGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 97 VGIGSIGEVPILLAKPQAYMNYSGESVGPLAAYYQVPLRHILLVYDEMSLPNGVLRIQPK 156
Query: 582 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 761
GGHG+HNGVKSV+ HLD CR+FPRLCIGIGNPPG MDM+A+LLQ+FS ER Q+D+AL+Q
Sbjct: 157 GGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQ 216
Query: 762 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
GV+AVRTLV GF +++ FNL QKYKYHKV
Sbjct: 217 GVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 247
>ref|XP_002305823.1| peptidyl-tRNA hydrolase family protein [Populus trichocarpa]
gi|222848787|gb|EEE86334.1| peptidyl-tRNA hydrolase
family protein [Populus trichocarpa]
Length = 244
Score = 346 bits (887), Expect = 1e-92
Identities = 168/236 (71%), Positives = 196/236 (83%), Gaps = 2/236 (0%)
Frame = +3
Query: 153 CEATTR--RRHLLLPSRCNRFRRAVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHN 326
C ++R RR+L+ C R ASLPD EYTPWLI GLGNPG KYHGTRHN
Sbjct: 14 CPRSSRFHRRNLVSVRLCVR-----ASLPDNANGVKVEYTPWLIVGLGNPGTKYHGTRHN 68
Query: 327 VGFEMIDHISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQ 506
VGFEMID I++AEG+ +N+IQSKALIGIG IGEVPILL KPQ+YMN+SGESVGPLAA+Y+
Sbjct: 69 VGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYK 128
Query: 507 VPLRHILLMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGA 686
+PLRHILL+YDEM+LPNG+LRVQ KGGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG
Sbjct: 129 IPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGT 188
Query: 687 MDMRAFLLQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
MDM+AFLLQKFS ER Q+D++LEQGV+A+RTL+ GF+ + RFNL QKYKYHKV
Sbjct: 189 MDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244
>ref|XP_006645469.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like, partial [Oryza brachyantha]
Length = 227
Score = 345 bits (885), Expect = 2e-92
Identities = 166/224 (74%), Positives = 196/224 (87%), Gaps = 4/224 (1%)
Frame = +3
Query: 195 RCNRFRRA----VASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRA 362
R R RR VAS+PDP R EYTPWLIAGLGNPGNKYHGTRHNVGFEM+D I+R
Sbjct: 5 RRTRLRRGRLAVVASVPDPAARP-AEYTPWLIAGLGNPGNKYHGTRHNVGFEMVDRIARE 63
Query: 363 EGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDE 542
EGIT+N+IQSK+L+G+GSIGEVP+LLVKPQSY+NYSGE++ PLAAYY+VPLRHIL++YDE
Sbjct: 64 EGITMNTIQSKSLLGVGSIGEVPVLLVKPQSYINYSGEAIAPLAAYYEVPLRHILVIYDE 123
Query: 543 MSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFS 722
MSLPNGVLR+QRKGGHG HNG+++V+ +LD R+ PRL IGIG+PPG MD RAFLLQKFS
Sbjct: 124 MSLPNGVLRLQRKGGHGRHNGLQNVMENLDGSRELPRLSIGIGSPPGKMDTRAFLLQKFS 183
Query: 723 NEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
+EER+Q+D+ALEQGVDAVRTLV KGFS ++ RFNLVQKYK+H V
Sbjct: 184 SEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 227
>ref|XP_006482233.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic-like isoform X1 [Citrus sinensis]
Length = 244
Score = 345 bits (884), Expect = 2e-92
Identities = 164/211 (77%), Positives = 187/211 (88%)
Frame = +3
Query: 222 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 401
ASLPD N EYTPWLI GLGNPG KYHGTRHNVGFEMIDHI++A+ I +N+IQSKAL
Sbjct: 34 ASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKAL 93
Query: 402 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 581
IGIGSIGEVPILL KPQ+YMN+SGESVGPLAA+YQVPLRHIL++YDEMSL NGVLR+Q K
Sbjct: 94 IGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPK 153
Query: 582 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 761
GGHGHHNG+KSV++HLD CR+FPRLCIGIGNPPG MDM+A+LLQKFS ER Q+D+ALEQ
Sbjct: 154 GGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQ 213
Query: 762 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
GV+AVRTLV GF +N+ RFN+ QKYKYH V
Sbjct: 214 GVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 244
>ref|XP_006357844.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 243
Score = 344 bits (882), Expect = 4e-92
Identities = 162/214 (75%), Positives = 188/214 (87%)
Frame = +3
Query: 213 RAVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQS 392
R +ASLP+PN E+TPWLI GLGNPGNKYHGTRHNVGFEMID +S+ EGI LN+IQS
Sbjct: 31 RVLASLPEPNG-VKVEFTPWLIVGLGNPGNKYHGTRHNVGFEMIDRVSQEEGIVLNTIQS 89
Query: 393 KALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRV 572
KALIGIGSIGEVP++L KPQ+YMN+SGESVGPLAAYYQVPLRHILL+YDEMSLPNG+LR+
Sbjct: 90 KALIGIGSIGEVPVVLAKPQAYMNFSGESVGPLAAYYQVPLRHILLVYDEMSLPNGILRL 149
Query: 573 QRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSA 752
Q KGGHGHHNGVKSV+ HL+ RDFPR CIGIGNPPG MDM+A+LLQKFS+ ER Q+D+A
Sbjct: 150 QPKGGHGHHNGVKSVMEHLNGRRDFPRFCIGIGNPPGTMDMKAYLLQKFSDTERKQVDAA 209
Query: 753 LEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
L+QGV A+RT+V +GF + RFN+ QKYKYHKV
Sbjct: 210 LDQGVAAMRTVVLEGFGSRISRFNIGQKYKYHKV 243
>ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
gi|241929403|gb|EES02548.1| hypothetical protein
SORBIDRAFT_03g007130 [Sorghum bicolor]
Length = 256
Score = 343 bits (881), Expect = 5e-92
Identities = 169/232 (72%), Positives = 200/232 (86%), Gaps = 4/232 (1%)
Frame = +3
Query: 171 RRHLLLPS---RCNRFRRAVASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVGFE 338
RR+L P R +R VAS+PDP P EYTPWLIAGLGNPGNKY+GTRHNVGFE
Sbjct: 27 RRNLTAPLHRIRRSRLLTVVASVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFE 84
Query: 339 MIDHISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLR 518
M+D I+ EGIT+N+IQSK+L+GIGSIGEVP+L+VKPQSYMNYSGE++GPLAAYYQVPLR
Sbjct: 85 MVDRIAGEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLR 144
Query: 519 HILLMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMR 698
HILL+YD+MSLPNGVLR+Q+KGGHG HNG+++VI +LD R+FPRL IGIG+PPG MD R
Sbjct: 145 HILLIYDDMSLPNGVLRLQKKGGHGRHNGLQNVIENLDGRREFPRLSIGIGSPPGKMDPR 204
Query: 699 AFLLQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
AFLLQKFS+EER+Q+D++LEQGVDAVRTLV KGF + RFNLVQKYK+HKV
Sbjct: 205 AFLLQKFSSEERVQIDASLEQGVDAVRTLVLKGFCGSTERFNLVQKYKFHKV 256
>gb|ACF83436.1| unknown [Zea mays] gi|413947310|gb|AFW79959.1| chloroplast RNA
splicing2 [Zea mays]
Length = 256
Score = 343 bits (879), Expect = 9e-92
Identities = 169/234 (72%), Positives = 201/234 (85%), Gaps = 6/234 (2%)
Frame = +3
Query: 171 RRHLLLPSRCNRFRR-----AVASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVG 332
R++L P +R RR V+S+PDP P EYTPWLIAGLGNPGNKY+GTRHNVG
Sbjct: 27 RKNLTAP--LHRIRRPRPFTVVSSVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVG 82
Query: 333 FEMIDHISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVP 512
FEM+D I+ EGIT+N+IQSK+L+GIGSIGEVP+L+VKPQSYMNYSGE++GPLAAYYQVP
Sbjct: 83 FEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVP 142
Query: 513 LRHILLMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMD 692
LRHILL+YD+ SLPNGVLR+Q+KGGHG HNG+++VI HLD R+FPRL IGIG+PPG MD
Sbjct: 143 LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMD 202
Query: 693 MRAFLLQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
RAFLLQKFS+EER+Q+D+ALEQGVDAVRTLV KGFS + RFNLVQKYK+H+V
Sbjct: 203 PRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
>ref|XP_004299957.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 275
Score = 342 bits (878), Expect = 1e-91
Identities = 161/211 (76%), Positives = 185/211 (87%)
Frame = +3
Query: 222 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 401
A LP+ +R EYTPW+I GLGNPGNKYHGTRHNVGFEMID IS+ +GI +N+IQSKAL
Sbjct: 65 APLPENEDRFKVEYTPWMIVGLGNPGNKYHGTRHNVGFEMIDTISKTQGIVMNTIQSKAL 124
Query: 402 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 581
+GIGSIGEVPIL+VKPQ+YM+YSGE+VGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 125 VGIGSIGEVPILVVKPQAYMSYSGEAVGPLAAYYQVPLRHILLVYDEMSLPNGVLRLQPK 184
Query: 582 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 761
GHG+HNGVKSV+ HLD CRDFPRLCIGIGNPPG MDM+A+LLQKFS ER Q+D+AL Q
Sbjct: 185 AGHGYHNGVKSVVGHLDGCRDFPRLCIGIGNPPGTMDMKAYLLQKFSTVERHQIDAALGQ 244
Query: 762 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
GV+AV+TLV GF N+ FNL QKYK+HKV
Sbjct: 245 GVEAVKTLVLNGFDPNITSFNLRQKYKHHKV 275
>ref|NP_001104963.1| chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic precursor [Zea mays]
gi|75312019|sp|Q9M5P4.1|CRS2_MAIZE RecName:
Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 2; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 2; Flags: Precursor
gi|6752919|gb|AAF27939.1|AF225708_1 CRS2 [Zea mays]
Length = 256
Score = 342 bits (877), Expect = 2e-91
Identities = 167/229 (72%), Positives = 198/229 (86%), Gaps = 6/229 (2%)
Frame = +3
Query: 186 LPSRCNRFRR-----AVASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVGFEMID 347
L + +R RR V+S+PDP P EYTPWLIAGLGNPGNKY+GTRHNVGFEM+D
Sbjct: 30 LTAPLHRIRRPRPFTVVSSVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVD 87
Query: 348 HISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHIL 527
I+ EGIT+N+IQSK+L+GIGSIGEVP+L+VKPQSYMNYSGE++GPLAAYYQVPLRHIL
Sbjct: 88 RIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHIL 147
Query: 528 LMYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFL 707
L+YD+ SLPNGVLR+Q+KGGHG HNG+++VI HLD R+FPRL IGIG+PPG MD RAFL
Sbjct: 148 LIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFL 207
Query: 708 LQKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
LQKFS+EER+Q+D+ALEQGVDAVRTLV KGFS + RFNLVQKYK+H+V
Sbjct: 208 LQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
>ref|XP_006430750.1| hypothetical protein CICLE_v10012586mg [Citrus clementina]
gi|557532807|gb|ESR43990.1| hypothetical protein
CICLE_v10012586mg [Citrus clementina]
Length = 244
Score = 340 bits (872), Expect = 6e-91
Identities = 162/211 (76%), Positives = 186/211 (88%)
Frame = +3
Query: 222 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 401
ASLP N EYTPWLI GLGNPG KYHGTRHNVGFEMIDHI++A+ I +N+IQSKAL
Sbjct: 34 ASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKAL 93
Query: 402 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 581
IGIGSIGEVPILL KPQ+YMN+SGESVGPLAA+YQVPLRHIL++YDEMSL NGVLR+Q K
Sbjct: 94 IGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPK 153
Query: 582 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 761
GGHGHHNG+KSV++HLD CR+FPRLCIGIGNPPG MDM+A+LLQKFS E+ Q+D+ALEQ
Sbjct: 154 GGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEQEQIDAALEQ 213
Query: 762 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
GV+AVRTLV GF +N+ RFN+ QKYKYH V
Sbjct: 214 GVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 244
>ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic [Vitis vinifera]
gi|296087264|emb|CBI33638.3| unnamed protein product
[Vitis vinifera]
Length = 246
Score = 339 bits (870), Expect = 1e-90
Identities = 168/228 (73%), Positives = 190/228 (83%)
Frame = +3
Query: 171 RRHLLLPSRCNRFRRAVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDH 350
RR L P+R ASLPD N EYTPWLI GLGNPGNKYHGTRHNVGFEMID
Sbjct: 24 RRRRLAPARLC----VSASLPDANG-IKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDR 78
Query: 351 ISRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILL 530
IS+ EGI LN+IQSKALIGIGSIGEVPILL KPQ+YMN+SGESVGPLAAYYQVPLRHIL+
Sbjct: 79 ISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLRHILV 138
Query: 531 MYDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLL 710
+YDEM+LPNGVLR+ +GGHG+HNG+K+V+ HLD CR+FPRLCIGIGNPPG MDM+A+LL
Sbjct: 139 VYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLL 198
Query: 711 QKFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
QKFS EER Q+D+A EQG+ AVR LV GF+ + RFNL QKYKYHKV
Sbjct: 199 QKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246
>ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase,
putative [Ricinus communis]
Length = 253
Score = 338 bits (868), Expect = 2e-90
Identities = 166/219 (75%), Positives = 187/219 (85%), Gaps = 9/219 (4%)
Frame = +3
Query: 225 SLPDP-NERTNPEYTPWLIAGLGNPGNKYHGTRHNV--------GFEMIDHISRAEGITL 377
SLP+ N EYTPWLI GLGNPGNKYHGTRHNV GFEMID I++AE + +
Sbjct: 35 SLPENGNGVAKIEYTPWLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAM 94
Query: 378 NSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPN 557
N+IQSKALIGIG I EVPILLVKPQ+YMN+SGESVGPLAA+YQVPLRHILL+YDEMSLPN
Sbjct: 95 NTIQSKALIGIGCIKEVPILLVKPQAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPN 154
Query: 558 GVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERI 737
GV+R+Q KGGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG MDMRAFLLQKFS+ ER
Sbjct: 155 GVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTERE 214
Query: 738 QMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
Q+D+AL QG+DAVRTLV GF++N+ RFNL QKYKYHKV
Sbjct: 215 QIDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKYHKV 253
>ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
gi|449519774|ref|XP_004166909.1| PREDICTED:
chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
Length = 249
Score = 338 bits (867), Expect = 2e-90
Identities = 162/212 (76%), Positives = 185/212 (87%), Gaps = 1/212 (0%)
Frame = +3
Query: 222 ASLPDPNER-TNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKA 398
AS PD + EYTPWLI GLGNPGNKYHGTRHNVGFEMID I++A+GI +N+IQSKA
Sbjct: 38 ASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKA 97
Query: 399 LIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQR 578
LIGIGSIGEVPILL KPQ+YMN+ GESVGPLAA+YQ+PLRH+LL YDEM+LPNGVLR+Q
Sbjct: 98 LIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQP 157
Query: 579 KGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALE 758
K GHGHHNGVKSV+ HLD R+FPRLCIGIGNPPG MDM+AFLLQKFS+ ER Q+D+ALE
Sbjct: 158 KAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALE 217
Query: 759 QGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
QGV+AVRTL GFS+ ++RFNL QKYKYHKV
Sbjct: 218 QGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 249
>gb|ESW11164.1| hypothetical protein PHAVU_008G007300g [Phaseolus vulgaris]
Length = 247
Score = 338 bits (866), Expect = 3e-90
Identities = 163/227 (71%), Positives = 190/227 (83%)
Frame = +3
Query: 174 RHLLLPSRCNRFRRAVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHI 353
R+L PS R S+ EYTPWLI GLGNPGNKYHGTRHN+GFE+ID +
Sbjct: 22 RYLKTPSVKTR-HSVRCSVSQRRNEARVEYTPWLIVGLGNPGNKYHGTRHNIGFEIIDSL 80
Query: 354 SRAEGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLM 533
S+AEGI +N+IQSKALIGIGSIGEVPILL KPQ+YMN+SGESVGPLAAYYQVPLRHILL+
Sbjct: 81 SQAEGIKMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLRHILLV 140
Query: 534 YDEMSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQ 713
YDE SLPNGVLR+Q KGGHGHHNG+K+V+ HLD C FPRL +GIGNPPG MD+RAFLLQ
Sbjct: 141 YDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAFLLQ 200
Query: 714 KFSNEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 854
KFS+ ER+Q+D++LEQGV AVRT+V KGF ++++RFNL QKYKYHKV
Sbjct: 201 KFSSAERMQIDASLEQGVVAVRTVVLKGFDQHVNRFNLGQKYKYHKV 247