BLASTX nr result

ID: Zingiber24_contig00016369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00016369
         (437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY10556.1| Nucleic acid binding protein, putative isoform 2 ...    55   1e-08
gb|EOY10555.1| RNA binding family protein isoform 1 [Theobroma c...    55   1e-08
ref|XP_006364741.1| PREDICTED: uncharacterized protein LOC102595...    60   4e-07
ref|XP_006364740.1| PREDICTED: uncharacterized protein LOC102595...    60   4e-07
ref|XP_006364739.1| PREDICTED: uncharacterized protein LOC102595...    60   4e-07
ref|XP_004249088.1| PREDICTED: uncharacterized protein LOC101253...    60   4e-07
ref|XP_006284322.1| hypothetical protein CARUB_v10005495mg [Caps...    59   5e-07
gb|EMJ03612.1| hypothetical protein PRUPE_ppa009644mg [Prunus pe...    47   8e-07
gb|EMJ03611.1| hypothetical protein PRUPE_ppa009644mg [Prunus pe...    47   8e-07
ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246...    57   3e-06
ref|XP_003559581.1| PREDICTED: uncharacterized protein LOC100829...    55   7e-06

>gb|EOY10556.1| Nucleic acid binding protein, putative isoform 2 [Theobroma cacao]
          Length = 269

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 32/72 (44%), Positives = 43/72 (59%)
 Frame = +1

Query: 22  MEKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIA 201
           M+ RTV+V NL     + ++       GDIE +EI G+   G  ++A VTFK+P+ LEIA
Sbjct: 1   MQTRTVQVKNLSDLASEREIHEFFSFSGDIERIEIIGE--PGQSKIAYVTFKDPKALEIA 58

Query: 202 LLLSVLTFPSKI 237
           LLLS  T   KI
Sbjct: 59  LLLSGATIVDKI 70



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 249 GATIVDRVVNIASVENYVPTIE 314
           GATIVD++V I   ENY+P  E
Sbjct: 63  GATIVDKIVVITCAENYLPKPE 84


>gb|EOY10555.1| RNA binding family protein isoform 1 [Theobroma cacao]
          Length = 236

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 32/72 (44%), Positives = 43/72 (59%)
 Frame = +1

Query: 22  MEKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIA 201
           M+ RTV+V NL     + ++       GDIE +EI G+   G  ++A VTFK+P+ LEIA
Sbjct: 1   MQTRTVQVKNLSDLASEREIHEFFSFSGDIERIEIIGE--PGQSKIAYVTFKDPKALEIA 58

Query: 202 LLLSVLTFPSKI 237
           LLLS  T   KI
Sbjct: 59  LLLSGATIVDKI 70



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 249 GATIVDRVVNIASVENYVPTIE 314
           GATIVD++V I   ENY+P  E
Sbjct: 63  GATIVDKIVVITCAENYLPKPE 84


>ref|XP_006364741.1| PREDICTED: uncharacterized protein LOC102595744 isoform X3 [Solanum
           tuberosum]
          Length = 252

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +1

Query: 25  EKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIAL 204
           E RTVRVGN+     + ++       G+IEH+EIR  R+ G  + A VTFK+P+ LEIAL
Sbjct: 3   EVRTVRVGNVSDLAAEREVREFFSFSGEIEHIEIR--REQGQSKTAFVTFKDPKALEIAL 60

Query: 205 LLSVLTFPSKIKEIRE 252
           LLS  T   +I  I +
Sbjct: 61  LLSGATIVDQIVNITQ 76


>ref|XP_006364740.1| PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum
           tuberosum]
          Length = 273

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +1

Query: 25  EKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIAL 204
           E RTVRVGN+     + ++       G+IEH+EIR  R+ G  + A VTFK+P+ LEIAL
Sbjct: 3   EVRTVRVGNVSDLAAEREVREFFSFSGEIEHIEIR--REQGQSKTAFVTFKDPKALEIAL 60

Query: 205 LLSVLTFPSKIKEIRE 252
           LLS  T   +I  I +
Sbjct: 61  LLSGATIVDQIVNITQ 76


>ref|XP_006364739.1| PREDICTED: uncharacterized protein LOC102595744 isoform X1 [Solanum
           tuberosum]
          Length = 274

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +1

Query: 25  EKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIAL 204
           E RTVRVGN+     + ++       G+IEH+EIR  R+ G  + A VTFK+P+ LEIAL
Sbjct: 3   EVRTVRVGNVSDLAAEREVREFFSFSGEIEHIEIR--REQGQSKTAFVTFKDPKALEIAL 60

Query: 205 LLSVLTFPSKIKEIRE 252
           LLS  T   +I  I +
Sbjct: 61  LLSGATIVDQIVNITQ 76


>ref|XP_004249088.1| PREDICTED: uncharacterized protein LOC101253037 [Solanum
           lycopersicum]
          Length = 273

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = +1

Query: 25  EKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIAL 204
           E RTVRVGN+     + ++       G+I+H+EIR  R+ G  + A VTFK+P+ LEIAL
Sbjct: 3   EVRTVRVGNVSDLAAEREVREFFSFSGEIDHIEIR--REQGQSKTAFVTFKDPKALEIAL 60

Query: 205 LLSVLTFPSKIKEIRE 252
           LLS  T   +I  I++
Sbjct: 61  LLSGATIVDQIVSIKQ 76


>ref|XP_006284322.1| hypothetical protein CARUB_v10005495mg [Capsella rubella]
           gi|482553027|gb|EOA17220.1| hypothetical protein
           CARUB_v10005495mg [Capsella rubella]
          Length = 268

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = +1

Query: 22  MEKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIA 201
           M+ R+V+V N+     + ++       GDIEH+EI+  ++ G  RVA VTF +P+ LEIA
Sbjct: 1   MQTRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKCKEVGQSRVAFVTFTDPKALEIA 60

Query: 202 LLLSVLTFPSKIKEI 246
           LLLS  T   KI  I
Sbjct: 61  LLLSGATIVDKIVTI 75


>gb|EMJ03612.1| hypothetical protein PRUPE_ppa009644mg [Prunus persica]
          Length = 283

 Score = 46.6 bits (109), Expect(2) = 8e-07
 Identities = 27/72 (37%), Positives = 41/72 (56%)
 Frame = +1

Query: 22  MEKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIA 201
           ++ RTV+V  L       ++       G+IE ++I+  R+ G  + A VTFK+P+ LEIA
Sbjct: 4   LQTRTVQVKQLSDLASDREIHEFFSFSGEIERIQIQ--REPGQSKTAFVTFKDPKALEIA 61

Query: 202 LLLSVLTFPSKI 237
           LLLS  T   +I
Sbjct: 62  LLLSGATIVDQI 73



 Score = 32.0 bits (71), Expect(2) = 8e-07
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +3

Query: 249 GATIVDRVVNIASVENYVP 305
           GATIVD++V I+ VENYVP
Sbjct: 66  GATIVDQIVIISPVENYVP 84


>gb|EMJ03611.1| hypothetical protein PRUPE_ppa009644mg [Prunus persica]
          Length = 272

 Score = 46.6 bits (109), Expect(2) = 8e-07
 Identities = 27/72 (37%), Positives = 41/72 (56%)
 Frame = +1

Query: 22  MEKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIA 201
           ++ RTV+V  L       ++       G+IE ++I+  R+ G  + A VTFK+P+ LEIA
Sbjct: 4   LQTRTVQVKQLSDLASDREIHEFFSFSGEIERIQIQ--REPGQSKTAFVTFKDPKALEIA 61

Query: 202 LLLSVLTFPSKI 237
           LLLS  T   +I
Sbjct: 62  LLLSGATIVDQI 73



 Score = 32.0 bits (71), Expect(2) = 8e-07
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +3

Query: 249 GATIVDRVVNIASVENYVP 305
           GATIVD++V I+ VENYVP
Sbjct: 66  GATIVDQIVIISPVENYVP 84


>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
           gi|296089289|emb|CBI39061.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +1

Query: 22  MEKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIA 201
           M+ RTV+VG++     + ++       GDIEH+EI   RD+G  R A VTFK+P+ LEIA
Sbjct: 1   MQTRTVQVGHVSDLAGEREIHEFFSFSGDIEHVEIL--RDSGQLRTAFVTFKDPKALEIA 58

Query: 202 LLLSVLTFPSKIKEI 246
           LLLS  T   ++  I
Sbjct: 59  LLLSGATIVDQVVTI 73


>ref|XP_003559581.1| PREDICTED: uncharacterized protein LOC100829340 [Brachypodium
           distachyon]
          Length = 274

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = +1

Query: 25  EKRTVRVGNLGSCRRKGDLGXXXXXXGDIEHLEIRGDRDAGTERVASVTFKEPRPLEIAL 204
           E RTVRV N+     + ++       G+IEH++IR D  A T R A VTFKEP+ LEIAL
Sbjct: 7   EARTVRVRNISDLAGEREVREFFSFSGEIEHVDIRFDGVA-TGRTAYVTFKEPKALEIAL 65

Query: 205 LLSVLTFPSKIKEI 246
           LLS  T   ++  I
Sbjct: 66  LLSGATIVDRVVNI 79


Top