BLASTX nr result

ID: Zingiber24_contig00016361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00016361
         (459 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW07534.1| hypothetical protein PHAVU_010G138000g [Phaseolus...    57   2e-06
ref|XP_004486836.1| PREDICTED: F-box/LRR-repeat protein At3g5898...    57   3e-06
ref|XP_006605413.1| PREDICTED: FBD-associated F-box protein At4g...    55   1e-05

>gb|ESW07534.1| hypothetical protein PHAVU_010G138000g [Phaseolus vulgaris]
          Length = 442

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
 Frame = +1

Query: 118 THDSVRTSVLARRWRSLWASVPAIRFHYEDFHPKVVSRADEIVQQFIASRRDSSAV---- 285
           T D+++TSVL++RWR LW SVP + F  + F   V  +   +   ++ + RDSS V    
Sbjct: 72  TKDAIQTSVLSKRWRYLWVSVPCLNFSSKSFTRLVDFKKFVL---WVLNHRDSSHVKLLV 128

Query: 286 ---FSLSIDLDHLCPVTWIDYAKSHGAHEVTLYL-----GYYPLQTPIFSTLFDWPSLLT 441
              F +    D       I+YA SHG  E+ + L     G  P++ P+  +LF   SL  
Sbjct: 129 YYRFGVDYATDQHLLNKVIEYAASHGVEEIKINLRAKTSGSPPVEIPL--SLFSCQSLKK 186

Query: 442 LELE 453
           LEL+
Sbjct: 187 LELK 190


>ref|XP_004486836.1| PREDICTED: F-box/LRR-repeat protein At3g58980-like isoform X1
           [Cicer arietinum] gi|502081342|ref|XP_004486837.1|
           PREDICTED: F-box/LRR-repeat protein At3g58980-like
           isoform X2 [Cicer arietinum]
           gi|502081345|ref|XP_004486838.1| PREDICTED:
           F-box/LRR-repeat protein At3g58980-like isoform X3
           [Cicer arietinum]
          Length = 443

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 12/124 (9%)
 Frame = +1

Query: 118 THDSVRTSVLARRWRSLWASVPAIRFHYEDFHPKVVSRADEIVQQFIASRRDSSAVFSL- 294
           T ++VRT VL++RWR+LW S+  + F+ + FH     +   +   ++ SRRDSS V  L 
Sbjct: 74  TKEAVRTCVLSKRWRNLWTSILCLNFNSKSFHRLADFKKFVL---WVLSRRDSSLVKVLT 130

Query: 295 ----SID--LDHLCPVTWIDYAKSHGAHEVTLYL-----GYYPLQTPIFSTLFDWPSLLT 441
               S+D   D       ID+A SHG  E+ + L     G  P+  P+  +LF+  SL  
Sbjct: 131 YCRASVDYATDQNLFNKVIDHATSHGIEEIRINLRAKICGSPPVDIPL--SLFNCQSLKR 188

Query: 442 LELE 453
           LEL+
Sbjct: 189 LELK 192


>ref|XP_006605413.1| PREDICTED: FBD-associated F-box protein At4g10400-like [Glycine
           max]
          Length = 389

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
 Frame = +1

Query: 118 THDSVRTSVLARRWRSLWASVPAIRFHYEDFHPKVVSRADEIVQQFIASRRDSSAVFSLS 297
           T ++V+T VL++RW++LW  +  + F+    HP+  SR    V   ++ R  S ++  L 
Sbjct: 41  TRNAVQTCVLSQRWKNLWRRMTRLSFN----HPRTFSRYHNFVSHVLSGRDHSVSLIDLL 96

Query: 298 IDLDHLCPVTW----IDYAKSHGAHEVTLYL-----------GYYPLQTPIFSTLFDWPS 432
             + H    T     I YA SH   ++T+Y+            +   +TP    LF  PS
Sbjct: 97  FVVLHSTSATLLHDVISYAVSHNVQQLTIYIDTLDCINGATPSFQLSKTPFVPLLFPSPS 156

Query: 433 LLTLEL 450
           L +L+L
Sbjct: 157 LTSLKL 162


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