BLASTX nr result
ID: Zingiber24_contig00016184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00016184
(393 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like prote... 79 8e-13
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380... 79 8e-13
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin... 79 8e-13
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis... 79 8e-13
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me... 79 8e-13
ref|XP_006645076.1| PREDICTED: U6 snRNA-associated Sm-like prote... 78 1e-12
ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like prote... 78 1e-12
ref|XP_002458821.1| hypothetical protein SORBIDRAFT_03g040930 [S... 78 1e-12
ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group] g... 78 1e-12
gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis] 77 2e-12
ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citr... 77 2e-12
gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [T... 77 2e-12
ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like prote... 77 2e-12
ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus tri... 77 2e-12
gb|EMT26424.1| hypothetical protein F775_30226 [Aegilops tauschii] 77 2e-12
gb|EMS52648.1| hypothetical protein TRIUR3_07508 [Triticum urartu] 77 2e-12
ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like prote... 77 2e-12
dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare] 77 2e-12
gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus pe... 77 3e-12
ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycin... 77 3e-12
>ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cicer
arietinum]
Length = 98
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/61 (68%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRTVPFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
[Lotus japonicus]
Length = 97
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/61 (68%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRTVPFLFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
gi|255626487|gb|ACU13588.1| unknown [Glycine max]
Length = 97
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/61 (68%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRTVPFLFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
[Ricinus communis] gi|561025339|gb|ESW24024.1|
hypothetical protein PHAVU_004G095700g [Phaseolus
vulgaris]
Length = 97
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/61 (68%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRTVPFLFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
protein LSm3 [Medicago truncatula]
Length = 98
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/61 (68%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRTVPFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>ref|XP_006645076.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Oryza
brachyantha]
Length = 105
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRT+PFLFVRGDGVILVSPPLRT
Sbjct: 45 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTIPFLFVRGDGVILVSPPLRT 104
Query: 211 A 209
A
Sbjct: 105 A 105
>ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Setaria
italica]
Length = 98
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRT+PFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRTIPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>ref|XP_002458821.1| hypothetical protein SORBIDRAFT_03g040930 [Sorghum bicolor]
gi|194699902|gb|ACF84035.1| unknown [Zea mays]
gi|195628156|gb|ACG35908.1| U6 snRNA-associated Sm-like
protein LSm3 [Zea mays] gi|195643108|gb|ACG41022.1| U6
snRNA-associated Sm-like protein LSm3 [Zea mays]
gi|241930796|gb|EES03941.1| hypothetical protein
SORBIDRAFT_03g040930 [Sorghum bicolor]
Length = 98
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRT+PFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRTIPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group]
gi|56785201|dbj|BAD81919.1| small nuclear
ribonucleoprotein-like [Oryza sativa Japonica Group]
gi|113534440|dbj|BAF06823.1| Os01g0866700 [Oryza sativa
Japonica Group] gi|125528497|gb|EAY76611.1| hypothetical
protein OsI_04561 [Oryza sativa Indica Group]
gi|125572761|gb|EAZ14276.1| hypothetical protein
OsJ_04201 [Oryza sativa Japonica Group]
gi|215708805|dbj|BAG94074.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765758|dbj|BAG87455.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 104
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRT+PFLFVRGDGVILVSPPLRT
Sbjct: 44 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTIPFLFVRGDGVILVSPPLRT 103
Query: 211 A 209
A
Sbjct: 104 A 104
>gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis]
Length = 98
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RTVPFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citrus clementina]
gi|568838092|ref|XP_006473051.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like [Citrus
sinensis] gi|557536575|gb|ESR47693.1| hypothetical
protein CICLE_v10002950mg [Citrus clementina]
Length = 97
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RTVPFLFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 97
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RTVPFLFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Fragaria
vesca subsp. vesca]
Length = 97
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRTVP+LFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTKRTVPYLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|359493111|ref|XP_002266320.2| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like isoform 1
[Vitis vinifera] gi|222856945|gb|EEE94492.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 97
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RTVPFLFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>gb|EMT26424.1| hypothetical protein F775_30226 [Aegilops tauschii]
Length = 285
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/61 (65%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>gb|EMS52648.1| hypothetical protein TRIUR3_07508 [Triticum urartu]
Length = 98
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/61 (65%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 1
[Brachypodium distachyon]
Length = 98
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/61 (65%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 38 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRT 97
Query: 211 A 209
A
Sbjct: 98 A 98
>dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 121
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/61 (65%), Positives = 42/61 (68%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTT+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 61 KLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRT 120
Query: 211 A 209
A
Sbjct: 121 A 121
>gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus persica]
Length = 97
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/61 (67%), Positives = 41/61 (67%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKR VPFLFVRGDGVILVSPPLRT
Sbjct: 37 KLHAYDQHLNMILGDVEEVVTSIEIDDETYEEIVRTTKRNVPFLFVRGDGVILVSPPLRT 96
Query: 211 A 209
A
Sbjct: 97 A 97
>ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycine max]
gi|255628849|gb|ACU14769.1| unknown [Glycine max]
Length = 97
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/61 (67%), Positives = 41/61 (67%)
Frame = -3
Query: 391 KLHAYDQHLNMILGXXXXXXXXXXXXXXXXXXXVRTTKRTVPFLFVRGDGVILVSPPLRT 212
KLHAYDQHLNMILG VRTTKRTVPFLFVRGDGVILVSPPLR
Sbjct: 37 KLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRA 96
Query: 211 A 209
A
Sbjct: 97 A 97