BLASTX nr result
ID: Zingiber24_contig00016153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00016153
(422 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi... 73 4e-11
emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera] 73 4e-11
ref|XP_002515957.1| nucleic acid binding protein, putative [Rici... 69 5e-10
gb|EXB60284.1| Poly(A) polymerase [Morus notabilis] 68 1e-09
ref|XP_006476000.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006475999.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006475997.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006475996.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006450734.1| hypothetical protein CICLE_v10007557mg [Citr... 68 1e-09
ref|XP_006450733.1| hypothetical protein CICLE_v10007557mg [Citr... 68 1e-09
ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Popu... 64 2e-08
gb|EMJ17642.1| hypothetical protein PRUPE_ppa022017mg, partial [... 64 2e-08
gb|EXB74588.1| Poly(A) polymerase [Morus notabilis] 64 3e-08
ref|XP_006853732.1| hypothetical protein AMTR_s00056p00170310 [A... 63 5e-08
ref|XP_006465702.1| PREDICTED: poly(A) polymerase-like [Citrus s... 62 6e-08
gb|EOY29808.1| Poly(A) polymerase 1 isoform 8 [Theobroma cacao] 62 8e-08
gb|EOY29807.1| Poly(A) polymerase 1 isoform 7 [Theobroma cacao] 62 8e-08
gb|EOY29806.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao] 62 8e-08
gb|EOY29805.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao] 62 8e-08
gb|EOY29804.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao] 62 8e-08
>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 72.8 bits (177), Expect = 4e-11
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRRKQ+PSYVFP+GYKR P RP V++ +E C+ GSSE+ KRK D E +
Sbjct: 481 HVRRKQIPSYVFPEGYKRSRPQRP-----VNQQQGDEACRTGSSEKHMKRKKDPEEVDVE 535
Query: 240 PD---KRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQGEYTCKRM 106
D KR +ISP+++ S+ + +S + S A G K +
Sbjct: 536 QDKAAKRLTISPQRQDSV---SPEIISHRFSSSSQECSASGSAKAKEI 580
>emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 72.8 bits (177), Expect = 4e-11
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRRKQ+PSYVFP+GYKR P RP V++ +E C+ GSSE+ KRK D E +
Sbjct: 472 HVRRKQIPSYVFPEGYKRSRPQRP-----VNQQQGDEACRTGSSEKHMKRKKDPEEVDVE 526
Query: 240 PD---KRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQGEYTCKRM 106
D KR +ISP+++ S+ + +S + S A G K +
Sbjct: 527 QDKAAKRLTISPQRQDSV---SPEIISHRFSSSSQECSASGSAKAKEI 571
>ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 712
Score = 69.3 bits (168), Expect = 5e-10
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKT-MSEEECQG-GSSERRRKRKVDAECLG 247
HVRRKQ+PSYVFPDGY+R R Q+ DKT + + G GSSER KRK D++ +
Sbjct: 443 HVRRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEID 502
Query: 246 A---IPDKRASISPEKEKSLKSD 187
+P+KR SISP++ S+ D
Sbjct: 503 VKNDMPEKRNSISPQRRDSVSPD 525
>gb|EXB60284.1| Poly(A) polymerase [Morus notabilis]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRRKQ+P++VFPDGYKRP SR + Q + CQ ++E++RK +A + +I
Sbjct: 457 HVRRKQLPTFVFPDGYKRPRLSRHVIPQAIKTCEDTVGCQPCATEKKRKNDSEAVDVKSI 516
Query: 240 -PDKRASISPEKEKSLKSD 187
P+KRASISP++ SL +
Sbjct: 517 KPEKRASISPQRVASLSPE 535
>ref|XP_006476000.1| PREDICTED: poly(A) polymerase-like isoform X5 [Citrus sinensis]
Length = 652
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+ + E
Sbjct: 394 HVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVR 453
Query: 240 PDKRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQ 130
PDK K S+ S+ PVS + S D++
Sbjct: 454 PDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 485
>ref|XP_006475999.1| PREDICTED: poly(A) polymerase-like isoform X4 [Citrus sinensis]
Length = 727
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+ + E
Sbjct: 469 HVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVR 528
Query: 240 PDKRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQ 130
PDK K S+ S+ PVS + S D++
Sbjct: 529 PDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 560
>ref|XP_006475997.1| PREDICTED: poly(A) polymerase-like isoform X2 [Citrus sinensis]
gi|568844234|ref|XP_006475998.1| PREDICTED: poly(A)
polymerase-like isoform X3 [Citrus sinensis]
Length = 727
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+ + E
Sbjct: 472 HVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVR 531
Query: 240 PDKRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQ 130
PDK K S+ S+ PVS + S D++
Sbjct: 532 PDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 563
>ref|XP_006475996.1| PREDICTED: poly(A) polymerase-like isoform X1 [Citrus sinensis]
Length = 730
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+ + E
Sbjct: 472 HVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVR 531
Query: 240 PDKRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQ 130
PDK K S+ S+ PVS + S D++
Sbjct: 532 PDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 563
>ref|XP_006450734.1| hypothetical protein CICLE_v10007557mg [Citrus clementina]
gi|557553960|gb|ESR63974.1| hypothetical protein
CICLE_v10007557mg [Citrus clementina]
Length = 671
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+ + E
Sbjct: 394 HVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVR 453
Query: 240 PDKRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQ 130
PDK K S+ S+ PVS + S D++
Sbjct: 454 PDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 485
>ref|XP_006450733.1| hypothetical protein CICLE_v10007557mg [Citrus clementina]
gi|557553959|gb|ESR63973.1| hypothetical protein
CICLE_v10007557mg [Citrus clementina]
Length = 749
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
HVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+ + E
Sbjct: 472 HVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVR 531
Query: 240 PDKRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQ 130
PDK K S+ S+ PVS + S D++
Sbjct: 532 PDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 563
>ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Populus trichocarpa]
gi|550337050|gb|EEE92115.2| hypothetical protein
POPTR_0006s25200g [Populus trichocarpa]
Length = 652
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLG-- 247
HVRR+Q+P +VFPDGYKR PSR + Q + Q GS+ER KRK D E
Sbjct: 341 HVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVKRKNDCEMADLK 400
Query: 246 -AIPDKRASISPEKEKSL 196
P+KRAS SP++ +S+
Sbjct: 401 PVKPEKRASTSPQRLQSV 418
>gb|EMJ17642.1| hypothetical protein PRUPE_ppa022017mg, partial [Prunus persica]
Length = 581
Score = 64.3 bits (155), Expect = 2e-08
Identities = 43/101 (42%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKT--MSEEECQGGSSERRRKRKVDAECLG 247
HVRR+Q+P YVFPDG KRP PSR M Q+ DK E GS ER KRK D + +
Sbjct: 482 HVRRRQLPPYVFPDGCKRPRPSRIMAQQQADKLPYYDGEVSMTGSGERHLKRKKDLDGVD 541
Query: 246 ---AIP-DKRASISPEKEKSLKSDGQDPVSIEENQSQSRTD 136
+P +KR S+SP+ D PV I + S + D
Sbjct: 542 VNQVMPLEKRQSLSPQPR-----DSVSPVIISDKASSASPD 577
>gb|EXB74588.1| Poly(A) polymerase [Morus notabilis]
Length = 848
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLG-- 247
HVR++Q+PSYVFPDGY+RP PSR + + DK ++ Q S K+K E L
Sbjct: 483 HVRKRQIPSYVFPDGYRRPRPSR-LITPKTDKPSEDKRSQNDSGRHYLKQKKGTEVLDNK 541
Query: 246 -AIPDKRASISPEKEKSLKSD 187
P+K+ SI P++ S+ +
Sbjct: 542 VGSPEKQQSIGPQQHSSISPE 562
>ref|XP_006853732.1| hypothetical protein AMTR_s00056p00170310 [Amborella trichopoda]
gi|548857393|gb|ERN15199.1| hypothetical protein
AMTR_s00056p00170310 [Amborella trichopoda]
Length = 683
Score = 62.8 bits (151), Expect = 5e-08
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGS-SERRRKRKVDAECLGA 244
HVRRKQ+PSYVFP+GYKR PSRP+ +++ G + E + KRK+DA +
Sbjct: 466 HVRRKQIPSYVFPEGYKRVRPSRPLNTTPERSPQGKDDESGAAVVEHKLKRKLDASLNPS 525
Query: 243 IPDKRASISPEKEKSLKSDGQDPVSI--------------EENQSQSRTDAQGEYTCKRM 106
+K AS SPE S S + SI EE+ +S +QG T + +
Sbjct: 526 RLEKGASTSPETCSSDSSRLEKRASISRSTPSKPLLSCSPEESSMKSSVTSQGSLT-EEV 584
Query: 105 GGD 97
G D
Sbjct: 585 GSD 587
>ref|XP_006465702.1| PREDICTED: poly(A) polymerase-like [Citrus sinensis]
Length = 697
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAI 241
H+RRKQ+P YVFP+GYKR R QR + +E + G ++ VD +
Sbjct: 478 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDG---- 533
Query: 240 PDKRASISPEKEKSLKSDGQDPVSI 166
P+KR SISP+K+ SL D P S+
Sbjct: 534 PEKRQSISPQKQDSLSPDHLAPSSV 558
>gb|EOY29808.1| Poly(A) polymerase 1 isoform 8 [Theobroma cacao]
Length = 603
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGA- 244
HVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK + E
Sbjct: 260 HVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEK 319
Query: 243 --IPDKRASISPEKEKSLKSD 187
PDKR+SISP++ +S+ +
Sbjct: 320 MDKPDKRSSISPQRLESVSPE 340
>gb|EOY29807.1| Poly(A) polymerase 1 isoform 7 [Theobroma cacao]
Length = 595
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGA- 244
HVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK + E
Sbjct: 260 HVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEK 319
Query: 243 --IPDKRASISPEKEKSLKSD 187
PDKR+SISP++ +S+ +
Sbjct: 320 MDKPDKRSSISPQRLESVSPE 340
>gb|EOY29806.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao]
Length = 751
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGA- 244
HVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK + E
Sbjct: 482 HVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEK 541
Query: 243 --IPDKRASISPEKEKSLKSD 187
PDKR+SISP++ +S+ +
Sbjct: 542 MDKPDKRSSISPQRLESVSPE 562
>gb|EOY29805.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao]
Length = 801
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGA- 244
HVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK + E
Sbjct: 482 HVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEK 541
Query: 243 --IPDKRASISPEKEKSLKSD 187
PDKR+SISP++ +S+ +
Sbjct: 542 MDKPDKRSSISPQRLESVSPE 562
>gb|EOY29804.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao]
Length = 804
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = -3
Query: 420 HVRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGA- 244
HVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK + E
Sbjct: 482 HVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEK 541
Query: 243 --IPDKRASISPEKEKSLKSD 187
PDKR+SISP++ +S+ +
Sbjct: 542 MDKPDKRSSISPQRLESVSPE 562