BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00016144
         (1695 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A...   501   e-139
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   488   e-135
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   488   e-135
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]             484   e-134
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   483   e-133
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   475   e-131
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      471   e-130
gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus pe...   469   e-129
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   467   e-129
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   465   e-128
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   465   e-128
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   464   e-128
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   462   e-127
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   462   e-127
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              460   e-126
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps...   459   e-126
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   459   e-126
gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus...   458   e-126
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...   455   e-125
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-...   454   e-125

>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
            gi|548832002|gb|ERM94804.1| hypothetical protein
            AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score =  501 bits (1291), Expect = e-139
 Identities = 266/487 (54%), Positives = 352/487 (72%), Gaps = 5/487 (1%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNRNQHVIK 1516
            GKR L SSF  ++   +  PI D+ +  F A   +  IV++ S  F  N P NR    I 
Sbjct: 12   GKRLLRSSFLASDIE-RVIPIYDFGATQFPAVSHKSFIVSKKSPGFGPNSPSNRQTQYIN 70

Query: 1515 ALKKRASTLAPSTSNSWYE-RPDFESSLEVVILLQKSKLEKQWELEL----ATVSAPEKS 1351
            A+K+  +  + S+S+S  E  PDFESSLE +ILLQKS LEKQW L       +    E+S
Sbjct: 71   AIKEHVNAPSSSSSSSTTEANPDFESSLEALILLQKSMLEKQWNLSFDQAGTSTDLCEES 130

Query: 1350 QQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGT 1171
             +   ++ SG SAR+RR  S R+ +   A  V  RR KQ    VS ELL+ +  GYV+G 
Sbjct: 131  CKKLGVISSGASARQRRN-SLRRPLNQRAGTVLVRRKKQATPIVSPELLQGHFRGYVKGI 189

Query: 1170 ISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMSCAELHRKMI 991
             +++ L+HAEVV LS KI AG+ +EEH+ +LKEKL  +PSD+ LASSL++S +ELH K+I
Sbjct: 190  SNDSLLSHAEVVHLSWKIRAGLSLEEHKSRLKEKLGFDPSDELLASSLKISRSELHSKLI 249

Query: 990  ECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDSSKGFRISTY 811
            ECSLA EKLAMSN+RLVMS+AQKYDN+G++MAD             +KFDSSKGF+ISTY
Sbjct: 250  ECSLAKEKLAMSNIRLVMSIAQKYDNMGIEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 309

Query: 810  VYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMKLAESLNMSQ 631
            VYWWIRQGVSRA+++NSRTLRLP HLHERL  IR AK++L++QG+TPSI ++A+SLNMS+
Sbjct: 310  VYWWIRQGVSRAMVENSRTLRLPTHLHERLSLIRNAKIRLKEQGLTPSIHRIAKSLNMSK 369

Query: 630  KKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEEWSLKDEVTQ 451
            KKV+NAT+A  KV SLDREAFP  NGLPGETLH YIAD+ + N PWH  +EW LK EV +
Sbjct: 370  KKVKNATEAMTKVFSLDREAFPTLNGLPGETLHSYIADNNLMNNPWHGVDEWLLKAEVNK 429

Query: 450  LLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEKLKLAARSRR 271
            L+ + L++R+++II+LY+G+D  CHTWEDI +++GLSRERVR++GL A+EKLK AAR++R
Sbjct: 430  LISSTLAEREQDIIRLYYGLDKECHTWEDISRKIGLSRERVRQVGLVALEKLKNAARNKR 489

Query: 270  LGSLFIK 250
            L ++ +K
Sbjct: 490  LEAMLVK 496


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  488 bits (1257), Expect = e-135
 Identities = 258/495 (52%), Positives = 344/495 (69%), Gaps = 13/495 (2%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPP-NRNQHVI 1519
            GKR L SSF  ++ + KF  I D  S       T+  + A+ SS++  + P  NR    I
Sbjct: 13   GKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNPSFPSSNRQTQPI 72

Query: 1518 KALKKRASTLAPSTSNSWYERP--------DFESSLEVVILLQKSKLEKQWELE----LA 1375
            KALK+   T   ST+  W E P        + + S+E ++LLQKS LEKQW L     + 
Sbjct: 73   KALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTVL 132

Query: 1374 TVSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKSN 1195
            T S  +K+ +   +  SG+SAR+RR  S++K +  N S       KQ    +S EL++++
Sbjct: 133  TDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQLRSMISPELIQNH 192

Query: 1194 RSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMSC 1015
              GYV+G +SE  LTHAEVV LS KI+ G+ +++H+L+LKE+L  EPS +QLA+SLR+S 
Sbjct: 193  LKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISR 252

Query: 1014 AELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDSS 835
             EL   ++ECSLA EKL MSN+RLVMS+AQ+YDN+G DMAD             +KFDSS
Sbjct: 253  PELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSS 312

Query: 834  KGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMKL 655
            KGF+ISTYVYWWIRQGVSRAL++NSRTLRLP HLHERL  IR AK++LE++G+TPS+ ++
Sbjct: 313  KGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPSVDRI 372

Query: 654  AESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEEW 475
            AE LNMSQKKVRNAT+A  KV SLDREAFP  NGLPGET H YIAD++VEN PWH  ++W
Sbjct: 373  AEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNRVENNPWHGVDDW 432

Query: 474  SLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEKL 295
            +LKDEV +L+   L +R+R II+LY+G+D  C TWEDI K++GLSRERVR++GL A+EKL
Sbjct: 433  ALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKL 492

Query: 294  KLAARSRRLGSLFIK 250
            K AAR +++ ++ +K
Sbjct: 493  KHAARKKKMEAMLVK 507


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  488 bits (1257), Expect = e-135
 Identities = 257/495 (51%), Positives = 345/495 (69%), Gaps = 13/495 (2%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPP-NRNQHVI 1519
            GKR L SSF  ++ + KF  I D  S       T+  + A+ SS++  + P  NR    I
Sbjct: 13   GKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNPSFPSSNRQTQPI 72

Query: 1518 KALKKRASTLAPSTSNSWYERP--------DFESSLEVVILLQKSKLEKQWELE----LA 1375
            KALK+   T   ST+  W E P        + + S+E ++LLQKS LEKQW L     + 
Sbjct: 73   KALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTVL 132

Query: 1374 TVSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKSN 1195
            T S  +K+ +   +  SG+SAR+RR  S++K +  N S +     KQ    +S EL++++
Sbjct: 133  TDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQLRSMISPELIQNH 192

Query: 1194 RSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMSC 1015
              GYV+G +SE  LTHAEVV LS KI+ G+ +++H+L+LKE+L  EPS +QLA+SLR+S 
Sbjct: 193  LKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISR 252

Query: 1014 AELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDSS 835
             EL   ++ECSLA EKL MSN+RLVMS+AQ+YDN+G DMAD             +KFDSS
Sbjct: 253  PELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGLIGLLRGIEKFDSS 312

Query: 834  KGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMKL 655
            KGF+ISTYVYWWIRQGVSRAL++NSRTLRLP HLHERL  IR AK++LE++G+TP++ ++
Sbjct: 313  KGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPAVDRI 372

Query: 654  AESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEEW 475
            AE LNMSQKKVRNAT+A  KV SLDREAFP  NGLPGET H YIAD++VEN PWH  ++W
Sbjct: 373  AEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNRVENNPWHGVDDW 432

Query: 474  SLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEKL 295
            +LKDEV +L+   L +R+R II+LY+G+D  C TWEDI K++GLSRERVR++GL A+EKL
Sbjct: 433  ALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKL 492

Query: 294  KLAARSRRLGSLFIK 250
            K AAR +++ ++ +K
Sbjct: 493  KHAARKKKMEAMLVK 507


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  484 bits (1247), Expect = e-134
 Identities = 264/496 (53%), Positives = 345/496 (69%), Gaps = 14/496 (2%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPP-NRNQHVI 1519
            GKR L SSF  ++   K     DY S     S T+  IVA+ SS+  +++P  NR    I
Sbjct: 13   GKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQSLPSSNRRAQSI 72

Query: 1518 KALKKR---------ASTLAPSTSNSWYERPDFESSLEVVILLQKSKLEKQWELELA--- 1375
            KALK+          A  L   +++   E  D + S+E ++LLQKS LEKQW L      
Sbjct: 73   KALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLEKQWTLSFERTV 132

Query: 1374 -TVSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKS 1198
             T S   K  +   +  SG+SAR+RR  ++RK +  N S +     KQ    +S ELL+S
Sbjct: 133  FTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPN-AKQLRSLISPELLQS 191

Query: 1197 NRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMS 1018
               GYV+G +S+  L+HAEVV LS KI+AG+ +EEHRL+LKE+L  EPSD+QLA+SL++S
Sbjct: 192  RLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPSDEQLATSLKIS 251

Query: 1017 CAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDS 838
             AEL  K+IECSLA EKLAMSN+RLVMS+AQ+YDN+G +M+D             +KFDS
Sbjct: 252  RAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDS 311

Query: 837  SKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMK 658
            SKG++ISTYVYWWIRQGVSRAL++NSRTLRLP HLHERL  IR AK++LE++GITP+I +
Sbjct: 312  SKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPTIDR 371

Query: 657  LAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEE 478
            +AESLNMSQKKVRNAT+A  KV SLDR+AFP  NGLPGET H YIAD+ VEN PWH  +E
Sbjct: 372  IAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNHVENIPWHGVDE 431

Query: 477  WSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEK 298
            W+LKDEV +L+   L +R+R II+LY+G+D    TWEDI K++GLSRERVR++GL A+EK
Sbjct: 432  WALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRERVRQVGLVALEK 491

Query: 297  LKLAARSRRLGSLFIK 250
            LK AAR +++ ++ +K
Sbjct: 492  LKHAARKKKMEAMLVK 507


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  483 bits (1242), Expect = e-133
 Identities = 261/496 (52%), Positives = 348/496 (70%), Gaps = 14/496 (2%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPP-NRNQHVI 1519
            GKR L S+F  ++   K     ++    +  + T+  IVA+ SS++  + P  NRN   I
Sbjct: 12   GKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPSFPSSNRNTQSI 71

Query: 1518 KALKKRASTL-APSTSNSWY--------ERPDFESSLEVVILLQKSKLEKQWELEL---- 1378
            KALK+   T  APST+ + +        E  D + S+E ++LLQKS LEKQW L      
Sbjct: 72   KALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLEKQWNLSFERTD 131

Query: 1377 ATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKS 1198
            ++ S   KSQ+   +  SG+SAR+RR   RRK +  +   V A   KQ   +VS ELL++
Sbjct: 132  SSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQLKSAVSPELLQN 191

Query: 1197 NRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMS 1018
               GYV+G +SE  L+HAEVV LS  I+AG+ +E+H+ +LKE+L  +PSD+Q+A+SL++S
Sbjct: 192  RLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPSDEQVATSLKIS 251

Query: 1017 CAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDS 838
             AEL  K I CSLA EKLAMSN+RLVMS+AQ+YDN+G +MAD             +KFDS
Sbjct: 252  RAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDS 311

Query: 837  SKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMK 658
            SKGFRISTYVYWWIRQGVSRAL++NSRTLRLP HLHERL  IR AK++LE++G+TPSI +
Sbjct: 312  SKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDR 371

Query: 657  LAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEE 478
            +AESLN+SQKKVRNAT+A  KV SLDREAFP  NGLPGET H YIAD+ +EN PWH  ++
Sbjct: 372  IAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGVDD 431

Query: 477  WSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEK 298
            W+LKDEV +L+   L +R++ II+LY+G+DN   TWEDI K++GLSRERVR++GL A+EK
Sbjct: 432  WALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRERVRQVGLVALEK 491

Query: 297  LKLAARSRRLGSLFIK 250
            LK AAR ++L ++ +K
Sbjct: 492  LKHAARKKKLEAMLVK 507


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  475 bits (1223), Expect = e-131
 Identities = 261/498 (52%), Positives = 348/498 (69%), Gaps = 16/498 (3%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPP-NRNQHVI 1519
            GKR L SSF  ++   K   + D+    +  + T+  IVA+ SS++  + P  NRN H I
Sbjct: 13   GKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGPSFPSSNRNSHSI 72

Query: 1518 KALKKRASTLAPSTS-NSWYER-PDFES-------SLEVVILLQKSKLEKQWELEL---- 1378
            KALK+   T + S++  +W++   DFE        S+E ++LLQKS LEKQW L      
Sbjct: 73   KALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTN 132

Query: 1377 ATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHL-SVSS-ELL 1204
            ++ S  +K+ +   +  SG+SAR+RR  +RRK    N S+  ++      L SVSS +LL
Sbjct: 133  SSDSTSKKNNKKIPVTCSGVSARQRRVNNRRK--NQNQSKFMSQSSDFKFLRSVSSPDLL 190

Query: 1203 KSNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLR 1024
            ++   GYV+G +S+  L H EVV LS  I AG+  E+H+ +LKE+L  EPSD+Q+A SLR
Sbjct: 191  QNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEPSDEQIADSLR 250

Query: 1023 MSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKF 844
            +S A+L  K+I+CSLA EKLAMSN+RLVMS+AQKYDN+G +MAD             +KF
Sbjct: 251  ISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGLIGLLRGIEKF 310

Query: 843  DSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSI 664
            DSSKGF+ISTYVYWWIRQGVSRAL+ NSRTLRLP HLHERL  IR AK++LE++G+TPSI
Sbjct: 311  DSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSI 370

Query: 663  MKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVF 484
             ++AESLNMSQ+KVRNAT+A  KV SLDREAFP  NGLPGET H YIAD++ EN PWH  
Sbjct: 371  DRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRPENNPWHGV 430

Query: 483  EEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAM 304
            +EW+LK+EV +L+ + L +R++ II+LYHG+D  C TWEDI K++GLSRERVR++GL A+
Sbjct: 431  DEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRERVRQVGLVAL 490

Query: 303  EKLKLAARSRRLGSLFIK 250
            EKLK AAR R   ++ +K
Sbjct: 491  EKLKHAARKRNTEAMLVK 508


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  471 bits (1212), Expect = e-130
 Identities = 257/496 (51%), Positives = 333/496 (67%), Gaps = 13/496 (2%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNRNQHVIK 1516
            GKR L SSF  ++   K    +D+S         +  I A+ SS +  +   +R     K
Sbjct: 13   GKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPSCVSSRKSQSAK 72

Query: 1515 ALKKRASTLA-PSTSNSWYER--------PDFESSLEVVILLQKSKLEKQWELELA-TVS 1366
            +LK+     A PS   SW+E          D + S+EV++LLQKS LEKQW L L  T++
Sbjct: 73   SLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLEKQWNLSLEQTLT 132

Query: 1365 AP---EKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKSN 1195
            A    EK  +   I  SG SAR RR  SR++ +  ++S  P    K     +  ELL++ 
Sbjct: 133  ASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPLRSIIGPELLQNR 192

Query: 1194 RSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMSC 1015
              GYV+G +SE  LTHAEV+ LS KI+ G+ +EE + +LKE+L  EPSD QLA SL+MS 
Sbjct: 193  LKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPSDDQLAVSLKMSR 252

Query: 1014 AELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDSS 835
             +L   +IECSLA E+LAMSN+RLVMS+AQ+YDN+G +MAD             +KFD S
Sbjct: 253  TDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLIGLLRGIEKFDPS 312

Query: 834  KGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMKL 655
            KG++ISTYVYWWIRQGVSRAL++NSRTLRLP +LHERL  IR AK +LE++GITPS+  +
Sbjct: 313  KGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARLEEKGITPSVNNI 372

Query: 654  AESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEEW 475
            A SLNMSQKKVRNAT+A  K+ SLDREAFP  NGLPGETLH YIAD+ +EN PWH  + W
Sbjct: 373  AASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVW 432

Query: 474  SLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEKL 295
            +LKDEV  L+ + L  R+R II+LY+G+DN C TWEDI K++GLSRERVR++GL A+EKL
Sbjct: 433  ALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKL 492

Query: 294  KLAARSRRLGSLFIKQ 247
            K AAR R+L ++ IKQ
Sbjct: 493  KHAARKRQLDAMLIKQ 508


>gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  469 bits (1206), Expect = e-129
 Identities = 258/500 (51%), Positives = 347/500 (69%), Gaps = 18/500 (3%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSS-LPFTASCTRCTIVAQDSSHFERNVPP-NRNQHV 1522
            GKR L SSF  ++   K + + D+   L    S T+  + A+  S+     P  NR Q  
Sbjct: 13   GKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCSSRFPSSNRPQQS 72

Query: 1521 IKALKKRASTL-APSTSNS-WY--------ERPDFESSLEVVILLQKSKLEKQWELE--- 1381
            I+ALK+   T  APS++   W+        E  D E S+E ++LLQKS LEKQW L    
Sbjct: 73   IRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKSMLEKQWNLSFEK 132

Query: 1380 --LATVSAPEKSQQMPLIVRSGISARERR-TFSRRKYIGYNASEVPARRVKQPHLSVSSE 1210
              L   ++    +++P +  SG+SAR+RR T ++RK    +   +     K     VS E
Sbjct: 133  KVLRDSTSKTTDKKIP-VTCSGVSARQRRMTSTKRKTFNKSTCVMHPSTNKPLRAIVSPE 191

Query: 1209 LLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASS 1030
            LL+++  GYV+G +SE  LTH EVV LS KI+ G+ +EEH+ +LKE+L  EPSD+QLA+S
Sbjct: 192  LLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQLATS 251

Query: 1029 LRMSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQ 850
            LR+S A+L  K+IEC LA EKLAMSN+RLVMS+AQ+YDN+G +MAD             +
Sbjct: 252  LRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIE 311

Query: 849  KFDSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITP 670
            KFDSSKGF+ISTYVYWWIRQGVSRAL++NSRTLRLP HLHERL  IR AK++LE++GITP
Sbjct: 312  KFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITP 371

Query: 669  SIMKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWH 490
            SI ++AESLNMS+KKVRNAT+A  KV SLDR+AFP  NGLPGET H YIAD+++EN PWH
Sbjct: 372  SIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRLENIPWH 431

Query: 489  VFEEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLE 310
              + W+LK+EV++L+  +L +R++ II+LY+G++N C TWEDI K++GLSRERVR++GL 
Sbjct: 432  GVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGLSRERVRQVGLV 491

Query: 309  AMEKLKLAARSRRLGSLFIK 250
            A+EKLK AAR R + ++ +K
Sbjct: 492  ALEKLKHAARKREMEAMLLK 511


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
            gi|550325184|gb|EEE95160.2| hypothetical protein
            POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  467 bits (1202), Expect = e-129
 Identities = 256/496 (51%), Positives = 342/496 (68%), Gaps = 14/496 (2%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPN-RNQHVI 1519
            GKR L SSF  ++   K   + D+    +  + T+  IVA+ SS +  + P + RN H  
Sbjct: 13   GKRLLSSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYGPSFPSSYRNPHSN 72

Query: 1518 KALKKRASTL-APSTSNSWYER-PDFES-------SLEVVILLQKSKLEKQWELELATVS 1366
            KALK+   T  A ST  +W++   DFE        S+E +ILLQKS LEKQW L   +++
Sbjct: 73   KALKELIDTASASSTVATWFKTLDDFEEESSVLDYSVEALILLQKSMLEKQWNLSFESIN 132

Query: 1365 APE----KSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKS 1198
            + +    KS +   +  SG+SAR+RR  ++RK    N S+  +         +S +LL +
Sbjct: 133  SSDSKIKKSNKKIPVTCSGVSARQRRLNNKRK--NQNQSKFMS--------DISPDLLLN 182

Query: 1197 NRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMS 1018
               GYV+G +S+  L H EVV LS  I AG+ +E+H+  LKE+L  EPSD+QLA SLR+S
Sbjct: 183  RLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEPSDEQLADSLRIS 242

Query: 1017 CAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDS 838
             A+L  ++I+CSLA EKLAMSN+RLVMS+AQK DN+G +MAD             +KFDS
Sbjct: 243  RADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGLIGLLRGIEKFDS 302

Query: 837  SKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMK 658
            SKGF+ISTYVYWWIRQGVSRAL++N RTLRLP HLHERL  IR AK++LE++G+TPSI +
Sbjct: 303  SKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDR 362

Query: 657  LAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEE 478
            +AESLNMSQ+KVRNAT+A  KV SLDREAFP  NGLPGET H YIAD+++EN PWH  +E
Sbjct: 363  IAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGVDE 422

Query: 477  WSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEK 298
            W+LK+EV +L+ + L +R+R II+LYHG+D  C TWEDI K++GLSRERVR++GL A+EK
Sbjct: 423  WALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRERVRQVGLVALEK 482

Query: 297  LKLAARSRRLGSLFIK 250
            LK AAR  +L ++ +K
Sbjct: 483  LKHAARKGKLEAMLVK 498


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
            subsp. vesca]
          Length = 511

 Score =  465 bits (1196), Expect = e-128
 Identities = 253/497 (50%), Positives = 337/497 (67%), Gaps = 15/497 (3%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQ-DSSHFERNVPPNRNQH-- 1525
            GKR L SS   ++   K + + D+  +    S T+  + A+  SS +  +  P+ N+H  
Sbjct: 14   GKRLLSSSLSYSDITDKLFYLNDHGFVNCQLSSTKNVVTARKSSSKYSNSRFPSSNRHHE 73

Query: 1524 -VIKALKKRASTLAPSTSNSWY----------ERPDFESSLEVVILLQKSKLEKQWELEL 1378
              I+AL++ A T +  +S +            E  D E S+E ++LLQKS LEKQW L  
Sbjct: 74   QSIRALQEHADTASAPSSTTHQLLEEYTDLEEESSDLEYSVEALLLLQKSLLEKQWNLSF 133

Query: 1377 ATVSAPEKSQQMPLIVR-SGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLK 1201
                +  K     + V  SG+SAR+RR  ++RK    N SE+     K    ++S  LL+
Sbjct: 134  EKKLSTRKITDNKIPVTCSGVSARQRRMSTKRKAFSKNTSELQPSTNKYCRATISPSLLQ 193

Query: 1200 SNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRM 1021
            +  SGYV+G  S+  LTH EVV LS KI+ G+ +EEH+ +LKEKL  EPS +QLA+SLR+
Sbjct: 194  NRTSGYVKGVTSDHLLTHTEVVRLSKKIKIGLSVEEHKSRLKEKLGCEPSVEQLATSLRI 253

Query: 1020 SCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFD 841
            S  EL  K+I+CSLA EKL MSN+RLVMS+AQ+YDN+G +MAD             +KFD
Sbjct: 254  SRTELQSKLIQCSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFD 313

Query: 840  SSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIM 661
            +SKGF+ISTYVYWWIRQGVSRAL++NSRTLRLP HLHERL  IR AKV+LE++GITPSI 
Sbjct: 314  ASKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLEEKGITPSID 373

Query: 660  KLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFE 481
             +AESLNMS+KKVRNAT+A  KV SLDR+AFP  NGLPGET H YIAD++ EN PWH  +
Sbjct: 374  SIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRHENIPWHGLD 433

Query: 480  EWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAME 301
            E +LKDEV +L+  +L +R+R II+LY+G+DN C TWEDI K++GLSRERVR++GL A+E
Sbjct: 434  ELALKDEVNKLINLMLGEREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALE 493

Query: 300  KLKLAARSRRLGSLFIK 250
            KLK  AR + L ++ ++
Sbjct: 494  KLKHGARKKELEAMLVQ 510


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  465 bits (1196), Expect = e-128
 Identities = 254/498 (51%), Positives = 340/498 (68%), Gaps = 16/498 (3%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNRNQHV-I 1519
            GKR L SS+  ++   K    +D+ S  +    T+  IVA+ SS++    P +  Q+  I
Sbjct: 12   GKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPTFPASNQQNQSI 71

Query: 1518 KALKKRASTLAPSTSNSWY----------ERPDFESSLEVVILLQKSKLEKQWELE---- 1381
            KALK+     AP+ ++ W+          E  +   S+E ++LLQKS LEKQW L     
Sbjct: 72   KALKEHVDD-APTIADPWFQSYNSNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFERE 130

Query: 1380 -LATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELL 1204
             L   S+  K  +   +  SG+SAR+RR  ++RK      + +      Q    +S ELL
Sbjct: 131  VLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRK------TAIKTCGAMQLKSKISPELL 184

Query: 1203 KSNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLR 1024
            +    GYV+G +SE  L+HAEVV+LS KI+ G+ +EEH+ +LKEKL  EPSD Q+A+SL+
Sbjct: 185  QHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGCEPSDDQMATSLK 244

Query: 1023 MSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKF 844
            +S  EL  +MIECSLA EKLAMSN+RLVMS+AQKYDNLG +M D             +KF
Sbjct: 245  ISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRGIEKF 304

Query: 843  DSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSI 664
            DSSKGF+ISTYVYWWIRQGVSRAL++NSRTLRLPAHLHERL  IR AK +LE++GITP+I
Sbjct: 305  DSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTI 364

Query: 663  MKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVF 484
             ++A+ LNMSQKKVRNAT+A  K++SLDREAFP  NGL GET H YIAD++VEN PW+  
Sbjct: 365  DRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGETHHSYIADNRVENIPWNGV 424

Query: 483  EEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAM 304
            +EW+LKDEV +L+   L +R+R II+LY+G++  C TWEDI K++GLSRERVR++GL A+
Sbjct: 425  DEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISKRIGLSRERVRQVGLVAL 484

Query: 303  EKLKLAARSRRLGSLFIK 250
            EKLK AAR R++ ++ +K
Sbjct: 485  EKLKHAARKRQMEAMLLK 502


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
            gi|557097090|gb|ESQ37598.1| hypothetical protein
            EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  464 bits (1194), Expect = e-128
 Identities = 258/509 (50%), Positives = 351/509 (68%), Gaps = 27/509 (5%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQ----DSSHFERNVPPN-RN 1531
            GKR L SSF  ++   KF  + D+ S  +  + TR  I A+     SS++  ++P + R+
Sbjct: 13   GKRLLSSSFYYSDVTEKFLSVNDHCSSQYHIASTRSGITAKKTPSSSSNYSPSLPSSSRH 72

Query: 1530 QHVIKALKKRASTLA-------PSTSNSWYERPDFES----SLEVVILLQKSKLEKQWEL 1384
                KALK+    +A       P  S+   E   +E     S+E ++LLQKS LEKQW L
Sbjct: 73   TQSAKALKETVDVVASSVQPWLPPGSDKEMEGESYEDDLGHSVEALLLLQKSMLEKQWNL 132

Query: 1383 EL---ATVSAPEK---SQQMPLIVRSGISARERRTFSRRKYIGYNASEVPA----RRVKQ 1234
                 AT  +P K   +++   +  SGISAR+RR  +++K    N S V         KQ
Sbjct: 133  SFEKAATSESPSKKRMTRKKNPVTCSGISARQRRIGAKKKT---NMSHVKVVSEVSSGKQ 189

Query: 1233 PHLSVSSELLKSNR-SGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSE 1057
                ++SEL ++NR  GYVRG +SE  L+HAEVV LS KI++G+++++H+ +LK++L  E
Sbjct: 190  VKSVINSELFQNNRVKGYVRGVVSEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCE 249

Query: 1056 PSDKQLASSLRMSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXX 877
            PSD+QLA SL++S  EL   ++EC LA EKLAMSN+RLVMS+AQ+YDN+G +M+D     
Sbjct: 250  PSDEQLAISLKISRGELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGG 309

Query: 876  XXXXXXXXQKFDSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKV 697
                    +KFDSSKGFRISTYVYWWIRQGVSRAL+ NSRTLRLP HLHERL  IR AK+
Sbjct: 310  LIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKL 369

Query: 696  KLEDQGITPSIMKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIAD 517
            +L+++GITPSI ++AESLNMSQKKVRNAT+A  K+ SLDR+AFP  NGLPGET H YIAD
Sbjct: 370  RLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIAD 429

Query: 516  SKVENTPWHVFEEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSR 337
            +++EN PWH ++EW+LKDEV++L+   L +R+R II+LY+G+D  C TWEDI K++GLSR
Sbjct: 430  NRLENNPWHGYDEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSR 489

Query: 336  ERVRKLGLEAMEKLKLAARSRRLGSLFIK 250
            ERVR++GL A+EKLK AAR R++ ++ +K
Sbjct: 490  ERVRQVGLVALEKLKHAARKRKMEAMILK 518


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  462 bits (1189), Expect = e-127
 Identities = 248/494 (50%), Positives = 338/494 (68%), Gaps = 13/494 (2%)
 Frame = -1

Query: 1692 KRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNR--NQHVI 1519
            KR L SS   ++F  K     DY       S ++  ++A+ S++F    P +   +Q  I
Sbjct: 14   KRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCI 73

Query: 1518 KALKKRASTLAPSTSNSWY-------ERPDFESSLEVVILLQKSKLEKQWELE----LAT 1372
            KA+K+   T +   +  W+       E  + + ++E ++LLQKS LEKQW L     ++T
Sbjct: 74   KAVKEHVETPSSPIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVST 133

Query: 1371 VSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKSNR 1192
             +  EK+ +   +  SG+SAR+RR  S+RK    +      +  KQ   ++S ELL++  
Sbjct: 134  DTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRL 193

Query: 1191 SGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMSCA 1012
             GYV+G +SE  L+HAEVV LS KI+ G+ +EE + +LK++L  EPS+ QLA SL++S A
Sbjct: 194  KGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRA 253

Query: 1011 ELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDSSK 832
            EL  +M+E SLA EKLAMSN+RLVMS+AQ+YDN+G +MAD             +KFDSSK
Sbjct: 254  ELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSK 313

Query: 831  GFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMKLA 652
            GF+ISTYVYWWIRQGVSRAL++NSRTLRLP HLHERL  IR AKVKL+++GITPS+ ++A
Sbjct: 314  GFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIA 373

Query: 651  ESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEEWS 472
            ESLNMS+KKV+NAT+A  KV SLDREAFP  NGLPGET H YIAD+ +EN PWH  + W 
Sbjct: 374  ESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWI 433

Query: 471  LKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEKLK 292
            LK EV QL+   L  R+R II+LYHG+DN C TWE+I K++GLSRERVR++GL A+EKLK
Sbjct: 434  LKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLK 493

Query: 291  LAARSRRLGSLFIK 250
             AA++R++ ++ +K
Sbjct: 494  KAAKTRKMEAMLLK 507


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 509

 Score =  462 bits (1188), Expect = e-127
 Identities = 251/497 (50%), Positives = 328/497 (65%), Gaps = 14/497 (2%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNRNQHVIK 1516
            GKR L SSF  ++   K    +D+S         +  I A+ SS +  +   +R    +K
Sbjct: 13   GKRLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPSCVSSRKLQSVK 72

Query: 1515 ALKKRASTLA-PSTSNSWYER---------PDFESSLEVVILLQKSKLEKQWEL---ELA 1375
            ALK+     + PS   SW+ER          + + S+EV++LLQKS LEKQW L   E  
Sbjct: 73   ALKEHVDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSMLEKQWNLSAEETL 132

Query: 1374 TVSAPEKSQQMPL-IVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKS 1198
            T S   K     + I  SG SAR RR  SR++ +   +S  P    K     +  +LL++
Sbjct: 133  TASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPISATKPLRSILGPDLLQN 192

Query: 1197 NRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMS 1018
               GYV+G +SE  LTH EV+ LS KI+ G+ +EE + +LKE+L  EPSD QLA SL+MS
Sbjct: 193  RLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGCEPSDDQLAVSLKMS 252

Query: 1017 CAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDS 838
              +L   +IECSLA E+L+MSN+RLVMS+AQ+YDN+G +MAD             +KFD 
Sbjct: 253  RTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDP 312

Query: 837  SKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMK 658
            SKG++ISTYVYWWIRQGVSR L++NSRTLRLP HLHERL  IR AK++LE++GI PS+  
Sbjct: 313  SKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNAKMRLEEKGINPSVNN 372

Query: 657  LAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEE 478
            +A SLNMSQKKVRNAT+A  KV SLDRE FP  NGLPG TLH YIAD+ +EN PWH  + 
Sbjct: 373  IAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYIADNHLENNPWHGVDV 432

Query: 477  WSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEK 298
            W+LKDEV  L+ + L +R+R II+LY+G+D+ C TWEDI K++GLSRERVR++GL A+EK
Sbjct: 433  WALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGLSRERVRQVGLVALEK 492

Query: 297  LKLAARSRRLGSLFIKQ 247
            LK AAR RRL ++ IKQ
Sbjct: 493  LKHAARKRRLDAMLIKQ 509


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  460 bits (1183), Expect = e-126
 Identities = 258/490 (52%), Positives = 337/490 (68%), Gaps = 8/490 (1%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNRNQHV-- 1522
            G R L SS   ++ A K     +    P   S     ++   S+    N  P+ N+ +  
Sbjct: 84   GNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLI---SAKKPSNYTPSSNRSIQS 140

Query: 1521 IKALKKRA------STLAPSTSNSWYERPDFESSLEVVILLQKSKLEKQWELELATVSAP 1360
            +KALK+        ST  P  S+S  E  D E  +E  +LLQKS LEKQW L      A 
Sbjct: 141  MKALKEHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLEKQWNLSF---KAR 197

Query: 1359 EKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLKSNRSGYV 1180
            +K ++   +  SG SAR+RR   R++ +    +E    RV+   L V + L      GYV
Sbjct: 198  QKRRE---VTCSGTSARQRRISGRKRVM----NEKSKSRVRAA-LGVENRL-----KGYV 244

Query: 1179 RGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRMSCAELHR 1000
            +G +SE  LTHA+VV LS KI+AG+ +E+H+ +LKE++ SEP+D+Q+A+SLRMS AEL  
Sbjct: 245  KGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQS 304

Query: 999  KMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFDSSKGFRI 820
            K+IECSLA EKLAMSN+RLVMS+AQ+YDN+G +MAD             +KFDSSKGF+I
Sbjct: 305  KLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKI 364

Query: 819  STYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIMKLAESLN 640
            STYVYWWIRQGVSRAL++NSRTLRLP+HLHERL  IR AK++LE++GITPSI ++AE LN
Sbjct: 365  STYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLN 424

Query: 639  MSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFEEWSLKDE 460
            MSQKKVRNAT+A  KV SLDREAFP  NGLPGETLH YIAD ++EN PWH  +EW+LKDE
Sbjct: 425  MSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVDEWALKDE 484

Query: 459  VTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAMEKLKLAAR 280
            V +L+ T L +R+R+II+LY+G+DN C TWEDI K++GLSRERVR++GL A+EKLK AAR
Sbjct: 485  VNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAAR 544

Query: 279  SRRLGSLFIK 250
              R+ ++ +K
Sbjct: 545  KGRMEAMLVK 554


>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
            gi|482570853|gb|EOA35041.1| hypothetical protein
            CARUB_v10020145mg [Capsella rubella]
          Length = 521

 Score =  459 bits (1182), Expect = e-126
 Identities = 252/509 (49%), Positives = 348/509 (68%), Gaps = 27/509 (5%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVP--PNRNQHV 1522
            GKR L SSF  ++   KF  + D+ S  +  + T+  I A+ +S      P  P+ N+H 
Sbjct: 12   GKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSGITAKKASSSSNYSPSFPSSNRHT 71

Query: 1521 --IKALKKRASTLA-------PSTSNSWYERPDFES------SLEVVILLQKSKLEKQWE 1387
               KA+ +    +A       P+ ++  +E   ++       S+E ++LLQKS LEK W 
Sbjct: 72   QSAKAVTESVDVVASTEQPWVPNVTDKEFEEGGYDDDVLIGHSVEALLLLQKSMLEKSWN 131

Query: 1386 LELATVSAPEKS-------QQMPLIVRSGISARERRTFSRRKYIGYNASEVP-ARRVKQP 1231
            L     ++ E S       +++P+I  SGISAR+RR  +++K    +A  V      KQ 
Sbjct: 132  LSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRIGAKKKTNMTSAKAVSDVSSGKQV 191

Query: 1230 HLSVSSELLKSNR--SGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSE 1057
               +SSEL + NR   GYV+G ISE  L+H EVV LS KI++G+++++H+ +LK++L  E
Sbjct: 192  RSVMSSELFQHNRVRGGYVKGVISEDVLSHTEVVRLSKKIKSGLRLDDHKSRLKDRLGCE 251

Query: 1056 PSDKQLASSLRMSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXX 877
            PSD+QLA SL++S AEL   ++EC LA EKLAMSN+RLVMS+AQ+YDNLG +M+D     
Sbjct: 252  PSDEQLAISLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGG 311

Query: 876  XXXXXXXXQKFDSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKV 697
                    +KFDSSKGFRISTYVYWWIRQGVSRAL+ NSRTLRLP HLHERL  IR AK+
Sbjct: 312  LIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKL 371

Query: 696  KLEDQGITPSIMKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIAD 517
            +L+++GITPSI ++AESLNMSQKKVRNAT+A  K+ SLDR+AFP  NGLPGET H YIAD
Sbjct: 372  RLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIAD 431

Query: 516  SKVENTPWHVFEEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSR 337
            +++EN PWH ++E +LK+EV++L+   L +R+R II+LY+G+D  C TWEDI K++GLSR
Sbjct: 432  NRLENNPWHGYDELALKEEVSKLITATLGEREREIIRLYYGLDKECLTWEDISKRIGLSR 491

Query: 336  ERVRKLGLEAMEKLKLAARSRRLGSLFIK 250
            ERVR++GL A+EKLK AAR R++ ++ +K
Sbjct: 492  ERVRQVGLVALEKLKHAARKRKMEAMILK 520


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
            vinifera]
          Length = 497

 Score =  459 bits (1182), Expect = e-126
 Identities = 258/497 (51%), Positives = 336/497 (67%), Gaps = 15/497 (3%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNRNQHV-- 1522
            G R L SS   ++ A K     +    P   S     ++   S+    N  P+ N+ +  
Sbjct: 13   GNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLI---SAKKPSNYTPSSNRSIQS 69

Query: 1521 IKALKKRA------STLAPSTSNSWYERPDFESSLEVVILLQKSKLEKQWELELATVSAP 1360
            +KALK+        ST  P  S+S  E  D E  +E  +LLQKS LEKQW L        
Sbjct: 70   MKALKEHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLEKQWNLSFEEEEEE 129

Query: 1359 EKS-------QQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELLK 1201
            E+        Q+   +  SG SAR+RR   R++ +    +E    RV+   L V + L  
Sbjct: 130  EEEDMGKKARQKRREVTCSGTSARQRRISGRKRVM----NEKSKSRVRAA-LGVENRL-- 182

Query: 1200 SNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLRM 1021
                GYV+G +SE  LTHA+VV LS KI+AG+ +E+H+ +LKE++ SEP+D+Q+A+SLRM
Sbjct: 183  ---KGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRM 239

Query: 1020 SCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKFD 841
            S AEL  K+IECSLA EKLAMSN+RLVMS+AQ+YDN+G +MAD             +KFD
Sbjct: 240  SRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 299

Query: 840  SSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSIM 661
            SSKGF+ISTYVYWWIRQGVSRAL++NSRTLRLP+HLHERL  IR AK++LE++GITPSI 
Sbjct: 300  SSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSID 359

Query: 660  KLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVFE 481
            ++AE LNMSQKKVRNAT+A  KV SLDREAFP  NGLPGETLH YIAD ++EN PWH  +
Sbjct: 360  RIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVD 419

Query: 480  EWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAME 301
            EW+LKDEV +L+ T L +R+R+II+LY+G+DN C TWEDI K++GLSRERVR++GL A+E
Sbjct: 420  EWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALE 479

Query: 300  KLKLAARSRRLGSLFIK 250
            KLK AAR  R+ ++ +K
Sbjct: 480  KLKNAARKGRMEAMLVK 496


>gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
          Length = 504

 Score =  458 bits (1179), Expect = e-126
 Identities = 247/499 (49%), Positives = 336/499 (67%), Gaps = 17/499 (3%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVP-PNRNQHVI 1519
            GKR L SS+  ++   K    +D+ S  +    T+  IVA+ SS++    P PNR    I
Sbjct: 12   GKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVSTKSVIVAKKSSNYTPTFPAPNRQNQSI 71

Query: 1518 KALKKRASTLAPSTSNSWY----------ERPDFESSLEVVILLQKSKLEKQWELELATV 1369
            K LK+     A + +++W+          E  +   S+E ++LLQKS LEKQW L     
Sbjct: 72   KVLKEIVDDAA-TVADAWFQSLSSNDLEVESSEMGYSVEALLLLQKSMLEKQWSLSFEGE 130

Query: 1368 SAPEKS------QQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSEL 1207
               E S      +++  +  SG+SAR+RR  ++RK      + V      Q    +S EL
Sbjct: 131  GVTEHSSKEKNCRKVAAVTCSGVSARQRRMNAKRK------TAVKTGGAVQLKSKISPEL 184

Query: 1206 LKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSL 1027
            L++   GYV+G +SE  L+HA+VVSLS KI+ G+ +EEH+ ++KE+L  EPSD ++A+SL
Sbjct: 185  LQNRLKGYVKGVVSEELLSHAQVVSLSEKIKVGLSLEEHKSRMKERLGCEPSDDEIATSL 244

Query: 1026 RMSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQK 847
            ++S  EL  KM+ECSLA EKLAMSN+RLVMS+AQ+Y+N G +M D             +K
Sbjct: 245  KISSTELREKMLECSLAREKLAMSNVRLVMSIAQRYENAGTEMGDLVQGGLIGLLRGIEK 304

Query: 846  FDSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPS 667
            FDSSKGF+ISTYVYWWIRQGVS+ALI+NSRTLRLPAHLHERL  IR AK++LE++GITP+
Sbjct: 305  FDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPAHLHERLSLIRNAKLRLEERGITPT 364

Query: 666  IMKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHV 487
            I ++A+ LNMSQKKVRNAT+A  K +SLDREAFP  NGL G+T H YIAD++VEN PW  
Sbjct: 365  IDRIAQHLNMSQKKVRNATEAISKTISLDREAFPSLNGLRGDTHHSYIADNRVENIPWEG 424

Query: 486  FEEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEA 307
             +EW+LKDEV +L+   L +R+R II+LY+G+   C TWEDI K++GLSRERVR++GL A
Sbjct: 425  VDEWALKDEVNRLINVTLKEREREIIRLYYGLGKECLTWEDISKRMGLSRERVRQVGLVA 484

Query: 306  MEKLKLAARSRRLGSLFIK 250
            +EKLK  AR+R L ++ +K
Sbjct: 485  LEKLKHGARNRELEAMLLK 503


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Glycine
            max] gi|571478813|ref|XP_006587676.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Glycine
            max]
          Length = 503

 Score =  455 bits (1170), Expect = e-125
 Identities = 250/498 (50%), Positives = 336/498 (67%), Gaps = 16/498 (3%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPPNRNQHV-I 1519
            GKR L SS+  ++   K    +D+ S  +    T+  I A+ SS++    P +  Q+  I
Sbjct: 12   GKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPTFPASNQQNQSI 71

Query: 1518 KALKKRASTLAPSTSNSWY----------ERPDFESSLEVVILLQKSKLEKQWELE---- 1381
            KALK+     AP+ ++SW+          E  +   S+E ++LLQKS LEKQW L     
Sbjct: 72   KALKEHVDD-APTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFERE 130

Query: 1380 -LATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQPHLSVSSELL 1204
             L   S+  K  +   +  SG+SAR+RR  ++RK      + +      Q    +S ELL
Sbjct: 131  VLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRK------TAIKTCGAMQLKSKISPELL 184

Query: 1203 KSNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPSDKQLASSLR 1024
            +    GYV+G +SE  L+HAEVV+LS +I+ G+ +EEH+ +LKE+L  EPSD Q+A SL+
Sbjct: 185  QHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCEPSDDQMAISLK 244

Query: 1023 MSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXXXXXXXXQKF 844
            +S  EL  +MIEC+LA EKLAMSN+RLVMS+AQKYDNLG +M D             +KF
Sbjct: 245  ISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRGIEKF 304

Query: 843  DSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKLEDQGITPSI 664
            DSSKGF+ISTYVYWWIRQGVSRAL++NSRTLRLPAHLHERL  IR AK +LE++GITP+I
Sbjct: 305  DSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTI 364

Query: 663  MKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSKVENTPWHVF 484
             ++A+ LNMSQKKVRNAT+A  K +SLDREAFP  NG+ GET H YIAD +VEN PW+  
Sbjct: 365  DRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHSYIADDRVENIPWNGV 424

Query: 483  EEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRERVRKLGLEAM 304
            +EW+LKDEV +L+   L +R+R II+LY+G+D    TWEDI K++GLSRERVR++GL A+
Sbjct: 425  DEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRIGLSRERVRQVGLVAL 484

Query: 303  EKLKLAARSRRLGSLFIK 250
            EKLK AAR R++ ++ +K
Sbjct: 485  EKLKHAARKRQMEAMLLK 502


>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
            arietinum]
          Length = 513

 Score =  454 bits (1168), Expect = e-125
 Identities = 249/507 (49%), Positives = 345/507 (68%), Gaps = 25/507 (4%)
 Frame = -1

Query: 1695 GKRFLISSFCPTEFAGKFYPIADYSSLPFTASCTRCTIVAQDSSHFERNVPP-NRNQHVI 1519
            GKR L SS+  ++   KFY   D+ S  +    ++  I+++ SS      P  +R  H I
Sbjct: 12   GKRLLSSSYHYSDVIEKFYHGCDFGSSQYHLPPSKSVILSKKSSKCAPTFPAYDRQNHSI 71

Query: 1518 KALKKRASTL--APSTSNS--WYE-----RPDFESSLEV----------VILLQKSKLEK 1396
            KALK+ A  +  AP+ +NS  W++       D E  LE           ++L+QKS LEK
Sbjct: 72   KALKEHAVVVDDAPAIANSEPWFQGGCNSNSDLELELETSDINCYSVDALLLMQKSMLEK 131

Query: 1395 QW----ELELATVSAPE-KSQQMPLIVRSGISARERRTFSRRKYIGYNASEVPARRVKQP 1231
            QW    E E+ T ++   K+++   +  SG+SAR+RR  S+RK      S V  R     
Sbjct: 132  QWCLSFEREVVTENSMRVKNRRKVTVTCSGVSARQRRMNSKRKISSKTGSAVQMRS---- 187

Query: 1230 HLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGIQMEEHRLKLKEKLRSEPS 1051
              +++ ELL++   GYV+G +SE  L+HA+VV LS KI+AG+ ++EH+ +LKE+L  EPS
Sbjct: 188  --AITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSLDEHKSRLKERLGCEPS 245

Query: 1050 DKQLASSLRMSCAELHRKMIECSLATEKLAMSNLRLVMSVAQKYDNLGVDMADXXXXXXX 871
            D Q+A+SL++S AEL  K+IECSLA EKL MSN+RLVMS+AQ+YDN+G +MAD       
Sbjct: 246  DDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 305

Query: 870  XXXXXXQKFDSSKGFRISTYVYWWIRQGVSRALIKNSRTLRLPAHLHERLISIRQAKVKL 691
                  +KFDSSKGF+ISTYVYWWIRQGVS+AL++NSRTLRLP HLHERL  IR A+ +L
Sbjct: 306  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRNAEYRL 365

Query: 690  EDQGITPSIMKLAESLNMSQKKVRNATQAEIKVLSLDREAFPYSNGLPGETLHDYIADSK 511
            E++GITP+I ++A+ LNMSQKKVRNAT+A  KV S+DREAFP  NGLPG+T H++IAD +
Sbjct: 366  EERGITPTIDRIAKCLNMSQKKVRNATEAINKVFSIDREAFPSLNGLPGDTHHNFIADKR 425

Query: 510  VENTPWHVFEEWSLKDEVTQLLYTILSKRDRNIIKLYHGIDNNCHTWEDIGKQLGLSRER 331
             EN PW+  +EW+LK+EV +L+   L +R+R I++LY+G+D  C TWEDI K++GLSRER
Sbjct: 426  HENIPWNGVDEWALKEEVNRLINVTLVEREREIVRLYYGLDKECLTWEDISKRIGLSRER 485

Query: 330  VRKLGLEAMEKLKLAARSRRLGSLFIK 250
            VR++GL A+EKLK  AR R + ++ +K
Sbjct: 486  VRQVGLVALEKLKHEARKREMEAMLLK 512