BLASTX nr result
ID: Zingiber24_contig00016049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00016049
(813 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma... 169 1e-39
ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi... 154 5e-35
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi... 148 3e-33
ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968... 148 3e-33
ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [S... 145 2e-32
ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containi... 141 2e-31
ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group] g... 139 9e-31
gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indi... 139 9e-31
ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [A... 137 6e-30
dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare] 135 2e-29
ref|XP_002464467.1| hypothetical protein SORBIDRAFT_01g018940 [S... 129 2e-27
ref|NP_175985.1| pentatricopeptide repeat-containing protein [Ar... 128 3e-27
ref|NP_001183654.1| hypothetical protein [Zea mays] gi|238013682... 127 4e-27
gb|EXB75243.1| hypothetical protein L484_026025 [Morus notabilis] 127 5e-27
emb|CBI41008.3| unnamed protein product [Vitis vinifera] 124 3e-26
ref|XP_002891858.1| pentatricopeptide repeat-containing protein ... 124 4e-26
ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containi... 124 5e-26
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi... 121 3e-25
ref|XP_006307708.1| hypothetical protein CARUB_v10009341mg [Caps... 120 4e-25
gb|AAL59033.1|AC087182_16 hypothetical protein [Oryza sativa Jap... 120 4e-25
>gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma cacao]
Length = 395
Score = 169 bits (428), Expect = 1e-39
Identities = 101/236 (42%), Positives = 144/236 (61%), Gaps = 6/236 (2%)
Frame = +2
Query: 122 SYSAAATSVPNPS--SVSAAKSAIRSESDAERLVSLFESVTDCPSFYGDRSIYKLTIDKL 295
S + T PNP S AAKSAI SE + E+L +F+ P+F R IY L+I KL
Sbjct: 15 SLFSTQTQKPNPPFPSFKAAKSAIISEKNPEKLAEIFQQCLHLPTFLRHRPIYHLSIRKL 74
Query: 296 ARRRRTDLIERVLE-KAMHSERTP--KSEGFLIRLIGLYSEAGMVDQAVRVFENI-PSLA 463
AR R DL++ +L+ + +HS+ KSEGF IRLI LYS AGMV QA++ E++ +
Sbjct: 75 ARANRLDLVDSLLQAQKLHSQNASALKSEGFWIRLIMLYSNAGMVPQALQTLEDLCQNRY 134
Query: 464 GQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVD 643
SE+SLCA+L+ +L+NG E++ ++F E+ GV P + S+N+ LKA NK++
Sbjct: 135 SIVSEKSLCAILTVYLNNGMFEQIYESFKTIPEKLGVKPSVVSHNLILKAFVKE--NKLE 192
Query: 644 EALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
AL ++M + P+I+ YN LL GY K GD GFD +KE+ +KGL N+ TY
Sbjct: 193 SALEWVEKM---DVSPNIATYNILLGGYLKNGDENGFDGAMKEVSRKGLEGNLTTY 245
>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product
[Vitis vinifera]
Length = 386
Score = 154 bits (388), Expect = 5e-35
Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 1/215 (0%)
Frame = +2
Query: 170 AAKSAIRSESDAERLVSLFE-SVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAM 346
AAKSA+ SE D E+L +F ++ F R +Y+L+ +L+R R DL+ER+++
Sbjct: 29 AAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLSRSGRLDLVERLIDHQK 88
Query: 347 HSERTPKSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCI 526
P++EGF IRLI LYS +GMVD A+R F + Q +E+SLCA+L+ +LDN I
Sbjct: 89 TLPH-PRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQLTEKSLCAILTVYLDNDLI 147
Query: 527 ERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCY 706
++L F+ E GV+PG SY++ LKA C ++ A L +M + PDI Y
Sbjct: 148 DQLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQQ--KDMESARKLLHKMEN----PDIGSY 201
Query: 707 NTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
N LL+ YS+ GD FD++LKEI KGL + TY
Sbjct: 202 NVLLEAYSENGDGVEFDEILKEIKNKGLEHDCTTY 236
>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 148 bits (373), Expect = 3e-33
Identities = 105/259 (40%), Positives = 142/259 (54%), Gaps = 9/259 (3%)
Frame = +2
Query: 62 MAAPLRRTFTIPFFRRHFLASYSAAATSVPNPSSVS------AAKSAIRSESDAERLVSL 223
MAA L RT F L S+S + T P+S S AAKSAI S+SD ++L
Sbjct: 1 MAAALPRTPRRLFLISR-LHSFSYSTTPPLQPTSDSPFPSLRAAKSAILSQSDPDKLAQS 59
Query: 224 FESVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLY 403
F + PSF R IY +I KLAR +R DLI+ V+ ++ H + SEGF IRLI LY
Sbjct: 60 FIQASTLPSFCRYRPIYHQSIRKLARAQRFDLID-VIIQSHHKSPSATSEGFWIRLIMLY 118
Query: 404 SEAGMVDQAVRVFEN-IPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAP 580
S GMV+QA+ + + I + SE+SLCA+LS FLDN E++ + F E+ GV P
Sbjct: 119 SSVGMVNQALYILDQAILHKSCNLSEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTP 178
Query: 581 GIASYNIYLKALCSSSANKVDEALALFDQM--HDKGIEPDISCYNTLLDGYSKKGDYAGF 754
S+N+ LKA N + A D++ D + P+I + LL Y GD GF
Sbjct: 179 TAVSHNLVLKAFVRQ--NDLPSARNWIDELCKDDAKVIPNIDSFTILLGAYWSNGDMIGF 236
Query: 755 DKVLKEICKKGLSQNVGTY 811
D++ KEI K+GL N+ TY
Sbjct: 237 DEIEKEISKRGLEFNLATY 255
>ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968|gb|ACG38952.1|
hypothetical protein [Zea mays]
gi|413939592|gb|AFW74143.1| hypothetical protein
ZEAMMB73_602318 [Zea mays]
Length = 419
Score = 148 bits (373), Expect = 3e-33
Identities = 99/247 (40%), Positives = 139/247 (56%), Gaps = 11/247 (4%)
Frame = +2
Query: 104 RRHFLASYSAAATSV------PNPSSVSAAKSAIRSESDA-ERLVSLFESVTDCPSFYGD 262
RRH L + T + P+ +S KS+IR + + L +LF S P+F D
Sbjct: 17 RRHLLIRLLSTQTQLVTPPTPTTPADLSRLKSSIRDAATTPDALATLFLSGLPHPAFLAD 76
Query: 263 RSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPK-SEGFLIRLIGLYSEAGMVDQAVRV 439
R ++ L++ +LA R DL+ VL ++ + +P SEGFL+RLI LYS AGM D ++ V
Sbjct: 77 RPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDHSLAV 136
Query: 440 FENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALC 619
F L S+R+L ALLSA+ DN +R AF+ E G+ PG+ S+N+ LKAL
Sbjct: 137 FR----LVKPASDRALSALLSAYHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVLLKALV 192
Query: 620 SSSANKVDEALALFDQMHD-KGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEIC--KKGL 790
+S V A LFD+M D G++PDI N +L GY GD FD+++KEI K+ L
Sbjct: 193 AS--GDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVKEIAGPKRRL 250
Query: 791 SQNVGTY 811
NVGTY
Sbjct: 251 KPNVGTY 257
>ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein
SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 145 bits (366), Expect = 2e-32
Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 11/247 (4%)
Frame = +2
Query: 104 RRHFLASYSAAATSVPNP------SSVSAAKSAIRSESDA-ERLVSLFESVTDCPSFYGD 262
RRH L + T + P + +S KS+IR + + + L +LF S P+F D
Sbjct: 17 RRHLLVRLLSTQTQLATPPTPTTPADLSRLKSSIRDAATSPDALATLFLSGLPHPAFLAD 76
Query: 263 RSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPK-SEGFLIRLIGLYSEAGMVDQAVRV 439
R ++ L++ +LA R DL+ VL ++ + +P SEGFL+RLI LYS AGM D ++ V
Sbjct: 77 RPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDHSLTV 136
Query: 440 FENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALC 619
F L S+R+L ALLS + DN +R AF+ E G+ PG+ S+N+ LKAL
Sbjct: 137 FR----LVNPPSDRALSALLSTYHDNRLYDRAVRAFNTLPAELGIKPGLVSHNVLLKALV 192
Query: 620 SSSANKVDEALALFDQMHD-KGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEIC--KKGL 790
+S + A + FD+M D G++PDI N +L GY GD A FD+++KEI + L
Sbjct: 193 AS--GDIAAARSAFDKMPDTAGVQPDIVSCNEILKGYLSTGDDAAFDQLVKEIAGPNRRL 250
Query: 791 SQNVGTY 811
NVGTY
Sbjct: 251 KPNVGTY 257
>ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Oryza brachyantha]
Length = 422
Score = 141 bits (356), Expect = 2e-31
Identities = 93/233 (39%), Positives = 130/233 (55%), Gaps = 8/233 (3%)
Frame = +2
Query: 137 ATSVPNPSSVSAAKSAIRSESDA-ERLVSLFESVTDCPSFYGDRSIYKLTIDKLARRRRT 313
+T P+ ++ K++IRS + + L LF S P+F DR ++ L++ +LA R
Sbjct: 34 STQTQTPADLAHLKNSIRSAAHTPDTLADLFLSGLSHPAFLADRPLFTLSVHRLASAGRR 93
Query: 314 DLIERVLEKAMHSERTPK-SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLC 490
DL+ +L ++ S P SEGFLIRLI LYS AGM D ++ F I S+R+L
Sbjct: 94 DLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTFRII----SPPSDRALS 149
Query: 491 ALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQM 670
ALLSA+ DN +R AF E G+ P + S+N+ LK+L ++ V A ALFD+M
Sbjct: 150 ALLSAYHDNRLYDRAIQAFRTLPAELGIKPSVVSHNVLLKSLVAN--GDVASARALFDEM 207
Query: 671 HDK-GIEPDISCYNTLLDGYSKKGDYAGFDKVLKE-----ICKKGLSQNVGTY 811
K G+EPDI N +L GY DYA FD+ LK+ K+ L NVGTY
Sbjct: 208 PVKAGVEPDIVSCNEILKGYLNTADYAAFDQFLKDNTTATAGKRRLKPNVGTY 260
>ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated
salt-inducible protein-like [Oryza sativa Japonica
Group] gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza
sativa Japonica Group] gi|125584252|gb|EAZ25183.1|
hypothetical protein OsJ_08983 [Oryza sativa Japonica
Group] gi|215769058|dbj|BAH01287.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 423
Score = 139 bits (351), Expect = 9e-31
Identities = 99/264 (37%), Positives = 137/264 (51%), Gaps = 15/264 (5%)
Frame = +2
Query: 65 AAPLRRTFTIP-----FFRRHFLASYSAAATS--VPNPSSVSAAKSAIRSESDA-ERLVS 220
AA LRR+ RR L + + T P+ ++ K++IRS + E L
Sbjct: 4 AAALRRSLAAGPAPALLLRRQLLMRFLSTQTQSQTQTPADLATLKNSIRSAAHTPEALAD 63
Query: 221 LFESVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPK-SEGFLIRLIG 397
LF S P+F DR I+ L++ +LA R DL+ +L ++ S P SEGFLIRLI
Sbjct: 64 LFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLIS 123
Query: 398 LYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVA 577
LYS AGM D ++ F + S+R+L ALLSA+ DN +R AF E G+
Sbjct: 124 LYSAAGMPDHSLSTFR----IVTPPSDRALSALLSAYHDNRLYDRAIQAFRTLPAELGIK 179
Query: 578 PGIASYNIYLKALCSSSANKVDEALALFDQMHDKG-IEPDISCYNTLLDGYSKKGDYAGF 754
P + S+N+ LK+ +S + A ALFD+M K +EPDI N +L GY DYA F
Sbjct: 180 PSVVSHNVLLKSFVAS--GDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAF 237
Query: 755 DKVLKEIC-----KKGLSQNVGTY 811
D+ LK+ K+ L NV TY
Sbjct: 238 DQFLKDNTTAAGGKRRLKPNVSTY 261
>gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 139 bits (351), Expect = 9e-31
Identities = 99/264 (37%), Positives = 137/264 (51%), Gaps = 15/264 (5%)
Frame = +2
Query: 65 AAPLRRTFTIP-----FFRRHFLASYSAAATS--VPNPSSVSAAKSAIRSESDA-ERLVS 220
AA LRR+ RR L + + T P+ ++ K++IRS + E L
Sbjct: 4 AAALRRSLAAGPAPALLLRRQLLMRFLSTQTQSQTQTPADLATLKNSIRSAAHTPEALAD 63
Query: 221 LFESVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPK-SEGFLIRLIG 397
LF S P+F DR I+ L++ +LA R DL+ +L ++ S P SEGFLIRLI
Sbjct: 64 LFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLIS 123
Query: 398 LYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVA 577
LYS AGM D ++ F + S+R+L ALLSA+ DN +R AF E G+
Sbjct: 124 LYSAAGMPDHSLSTFR----IVTPPSDRALSALLSAYHDNRLYDRAIQAFRTLPAELGIK 179
Query: 578 PGIASYNIYLKALCSSSANKVDEALALFDQMHDKG-IEPDISCYNTLLDGYSKKGDYAGF 754
P + S+N+ LK+ +S + A ALFD+M K +EPDI N +L GY DYA F
Sbjct: 180 PSVVSHNVLLKSFVAS--GDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAF 237
Query: 755 DKVLKEIC-----KKGLSQNVGTY 811
D+ LK+ K+ L NV TY
Sbjct: 238 DQFLKDNTTAAGGKRRLKPNVSTY 261
>ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [Amborella trichopoda]
gi|548851196|gb|ERN09472.1| hypothetical protein
AMTR_s00029p00104100 [Amborella trichopoda]
Length = 454
Score = 137 bits (344), Expect = 6e-30
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 2/215 (0%)
Frame = +2
Query: 173 AKSAIRSESDAERLVSLFESVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHS 352
A+S IRS E +F + P F DR+ + + KLA R DLIE+ LE
Sbjct: 96 ARSRIRSAGSPEEAFEVFRKASKSPRFRHDRAAFSAFVQKLAGYERFDLIEQALES---H 152
Query: 353 ERTPKS--EGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCI 526
++ P S EGF+IRLI LYSEAGMVD+A+ F + L RSE+S A LS L N
Sbjct: 153 KKPPFSLMEGFIIRLILLYSEAGMVDKALDTFYEMDELECPRSEKSFSATLSGLLLNKRF 212
Query: 527 ERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCY 706
+ + F ++ ++P + +Y+I ++A C + +D A + +M GI+PD+ Y
Sbjct: 213 DDVHRLFDEIPNKFDISPTVFTYDIIIRAFCEE--HLLDSAFEMLGKMEKIGIKPDVVSY 270
Query: 707 NTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
NTL+DG+ + GD D++LKE+ +KG + ++ TY
Sbjct: 271 NTLIDGFLRAGDQTRVDELLKEMTEKGCAPDLVTY 305
Score = 60.5 bits (145), Expect = 7e-07
Identities = 45/191 (23%), Positives = 84/191 (43%)
Frame = +2
Query: 239 DCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYSEAGM 418
+CP + T+ L +R D + R+ ++ + + +I + E +
Sbjct: 191 ECPR---SEKSFSATLSGLLLNKRFDDVHRLFDEIPNKFDISPTVFTYDIIIRAFCEEHL 247
Query: 419 VDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYN 598
+D A + + + + S L+ FL G R+ D + + E G AP + +YN
Sbjct: 248 LDSAFEMLGKMEKIGIKPDVVSYNTLIDGFLRAGDQTRV-DELLKEMTEKGCAPDLVTYN 306
Query: 599 IYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEIC 778
+ + C + +A AL ++M +GI P+ YN ++ G+ K+G+ +V + I
Sbjct: 307 LRILGFCKDKESV--KAQALLEEMRSRGIRPNSRSYNAVIFGFYKEGNLEEARRVYESIP 364
Query: 779 KKGLSQNVGTY 811
K S N GTY
Sbjct: 365 KGDESPNSGTY 375
>dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 135 bits (340), Expect = 2e-29
Identities = 93/233 (39%), Positives = 130/233 (55%), Gaps = 5/233 (2%)
Frame = +2
Query: 128 SAAATSVPNPSSVSAAKSAIRSESDA-ERLVSLFESVTDCPSFYGDRSIYKLTIDKLARR 304
S AA ++ +P+ + K++IRS + + L +LF F GDRSI+ L + +L
Sbjct: 34 SPAAPTI-SPAELVRIKNSIRSAATPPDELAALFLKGIPHTPFLGDRSIFSLAVSRLTAA 92
Query: 305 RRTDLIERVLEKAMHSERTPK-SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSER 481
R DL+ VL ++ + P SEGFLIRLI LY++AGM ++ F L S+R
Sbjct: 93 ARPDLVSSVLSASLTALPAPHPSEGFLIRLIALYADAGMPTHSLSTFR----LVVPPSDR 148
Query: 482 SLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALF 661
+L ALL+A+ D G R AF E +APG+ S+N+ LK C + V A +F
Sbjct: 149 ALSALLAAYHDAGQPARAIQAFRDLSAELSIAPGVVSHNVLLK--CMVATGDVAGARQVF 206
Query: 662 DQMHDK-GIEPDISCYNTLLDGYSKKGDYAGFDKVLKEIC--KKGLSQNVGTY 811
D M DK G++PDI N +L GY K GDYA FD +LKE+ K+ L NV TY
Sbjct: 207 DGMPDKAGLQPDIVSCNEMLKGYLKTGDYAAFDLLLKEVTGGKRRLKPNVTTY 259
>ref|XP_002464467.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
gi|241918321|gb|EER91465.1| hypothetical protein
SORBIDRAFT_01g018940 [Sorghum bicolor]
Length = 440
Score = 129 bits (323), Expect = 2e-27
Identities = 96/245 (39%), Positives = 133/245 (54%), Gaps = 14/245 (5%)
Frame = +2
Query: 119 ASYSAAATSVPN-PSSVSAA------KSAIRSESDAERLVSLFESVT---DCPSFYGDRS 268
AS +A TS P P+S SA + A+R+ESD R+ SL S D P + R
Sbjct: 38 ASSTATPTSTPAAPTSTSARAPVLDLQLAVRAESDPARIHSLVASALSGDDFPRIHTSRQ 97
Query: 269 IYKLTIDKLARRRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYSEAGMVDQAVRVFEN 448
++ L +L R RR DL +L+ + S TP S G L R + LY D A+R F +
Sbjct: 98 LFSLATSRLTRLRRPDLAASLLDLLLAS--TPPSPGLLARALSLYPGP---DDALRAFSS 152
Query: 449 IPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSS 628
P A RS+ SL ALLSAFL G ++ ++ + + +GVAPG AS+N+ L AL +S
Sbjct: 153 SPPAA--RSDVSLSALLSAFLRAGRLDEIKSTITLAESSHGVAPGRASHNVLLHALVKNS 210
Query: 629 ANKVDEALALFDQMHDKGIE----PDISCYNTLLDGYSKKGDYAGFDKVLKEICKKGLSQ 796
++ A L D+M +K ++ PDI YNT+L G S + D GF+K+LKEI L
Sbjct: 211 --ELAAARKLLDEMANKKLKHRPAPDIISYNTVLAGCSVQDDEEGFEKLLKEISLSNLEP 268
Query: 797 NVGTY 811
NV TY
Sbjct: 269 NVVTY 273
>ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14
[Arabidopsis thaliana] gi|18650654|gb|AAL75896.1|
At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis
thaliana] gi|332195194|gb|AEE33315.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 128 bits (321), Expect = 3e-27
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 8/260 (3%)
Frame = +2
Query: 56 SPMAAPLRRTFTIPFFRRHFLASYSAAATSVPNPSSVSAA--------KSAIRSESDAER 211
S ++ LR TF RR +S+AAT V P++V+AA S + E + +R
Sbjct: 2 SSLSRVLRGTFNTCPIRR-----FSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKR 56
Query: 212 LVSLFESVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPKSEGFLIRL 391
+V F+ + F + ++Y T+ +L +R +E +LE+ R EGF R+
Sbjct: 57 IVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEE-QKKYRDMSKEGFAARI 115
Query: 392 IGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYG 571
I LY +AGM + A +VFE +P+ +RS S ALLSA+ + + +++ F+ +
Sbjct: 116 ISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS 175
Query: 572 VAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYAG 751
+ P I SYN +KALC + + EA+AL D++ +KG++PDI +NTLL KG +
Sbjct: 176 IKPDIVSYNTLIKALCEK--DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 752 FDKVLKEICKKGLSQNVGTY 811
+++ ++ +K ++ ++ TY
Sbjct: 234 GEEIWAKMVEKNVAIDIRTY 253
>ref|NP_001183654.1| hypothetical protein [Zea mays] gi|238013682|gb|ACR37876.1| unknown
[Zea mays] gi|414871016|tpg|DAA49573.1| TPA:
hypothetical protein ZEAMMB73_384118 [Zea mays]
Length = 438
Score = 127 bits (320), Expect = 4e-27
Identities = 92/234 (39%), Positives = 127/234 (54%), Gaps = 7/234 (2%)
Frame = +2
Query: 131 AAATSVPNPSSVSAAKSAIRSESDAERLVSLFESVT---DCPSFYGDRSIYKLTIDKLAR 301
AA TS +SV + A+R+ESD R+ SL S D P + R ++ L +L R
Sbjct: 47 AAPTSTSARASVLDLQLAVRAESDPARIHSLVASALSSHDMPRLHTSRQLFSLATSRLIR 106
Query: 302 RRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSER 481
RR DL +L+ + S TP S G L R + LY D A+R F + P A RS+
Sbjct: 107 LRRADLAASLLDLLLAS--TPPSPGLLARALSLYPGP---DDALRAFSSSPPAA--RSDV 159
Query: 482 SLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALF 661
SL ALLSAFL G ++ ++ + + +GVAPG AS+N+ L AL +S ++ A L
Sbjct: 160 SLSALLSAFLRAGRLDDIKSTITLAESSHGVAPGRASHNVLLHALVKNS--ELAAARKLL 217
Query: 662 DQMHDKGIE----PDISCYNTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
D+M +K ++ PDI YNT+L GYS + D F K+LKEI L NV TY
Sbjct: 218 DEMANKKLKHRPAPDIISYNTVLAGYSVQDDEDEFGKLLKEISLSNLEPNVVTY 271
>gb|EXB75243.1| hypothetical protein L484_026025 [Morus notabilis]
Length = 371
Score = 127 bits (319), Expect = 5e-27
Identities = 79/234 (33%), Positives = 128/234 (54%), Gaps = 1/234 (0%)
Frame = +2
Query: 113 FLASYSAAATSVPNPSSV-SAAKSAIRSESDAERLVSLFESVTDCPSFYGDRSIYKLTID 289
F S+SA A++ N +V S A A E+ + LV F++ + F ++SIY+ +
Sbjct: 11 FTKSFSAIASTTKNDVTVKSLATKASSHETQLQNLVDKFKTSCESQRFRHNQSIYRRKVR 70
Query: 290 KLARRRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQ 469
+LA + +IE +LE + + EGF IRLIGLY EAGM D A +VF+ +P L
Sbjct: 71 RLAAANKFSMIEDILEHQKKYDDI-RREGFSIRLIGLYGEAGMFDHAHKVFDELPELNCD 129
Query: 470 RSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEA 649
R+ +SL ALL A LD +++ + F+ + P + SYNI + A C + +DEA
Sbjct: 130 RTVKSLNALLKAALDAKKFDKVIEIFNELPSRVSIEPDMISYNIVIHAFCEMGS--LDEA 187
Query: 650 LALFDQMHDKGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
L+LF ++ D G EPD+ +NTLL+ ++ +++ + K + +V +Y
Sbjct: 188 LSLFRKLEDNGQEPDLVTFNTLLNALYMNNRFSEGERIWATMESKNVVPDVRSY 241
>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 124 bits (312), Expect = 3e-26
Identities = 78/232 (33%), Positives = 123/232 (53%)
Frame = +2
Query: 116 LASYSAAATSVPNPSSVSAAKSAIRSESDAERLVSLFESVTDCPSFYGDRSIYKLTIDKL 295
L S SA A + N SV I E + +RLV F+ ++ F IY+ T+ +L
Sbjct: 21 LVSPSATAQATGNLESVF---KDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRL 77
Query: 296 ARRRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRS 475
A +R IE +LE+ + + EGF +RLI LY ++GM D A +VF+ +P +RS
Sbjct: 78 ASAKRFRWIEEILEEQKKYKDISR-EGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERS 136
Query: 476 ERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALA 655
S ALL A + + +++ F GV P + SYNI + A C + +D AL+
Sbjct: 137 VLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGS--LDSALS 194
Query: 656 LFDQMHDKGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
+ D+M G+EPD+ +NTLL+ + + G YA +K+ + K ++ NV +Y
Sbjct: 195 VLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSY 246
Score = 65.1 bits (157), Expect = 3e-08
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Frame = +2
Query: 329 VLEKAMHSERTPKSEGFLIRLIG----------------LYSEAGMVDQAVRVFENIPSL 460
+L +HS++ K +GF L G + E G +D A+ V + + +
Sbjct: 143 LLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKV 202
Query: 461 AGQRSERSLCALLSAFLDNGCI---ERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSA 631
+ + LL+AF NG E++ D ++ VAP + SYN L+ + S
Sbjct: 203 GLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKN----NVAPNVRSYNAKLRGVISE-- 256
Query: 632 NKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
N++ EA+ L D+M GI+PD+ N+L+ G+ G+ + EI + L TY
Sbjct: 257 NRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATY 316
>ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297337700|gb|EFH68117.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 395
Score = 124 bits (311), Expect = 4e-26
Identities = 76/252 (30%), Positives = 130/252 (51%)
Frame = +2
Query: 56 SPMAAPLRRTFTIPFFRRHFLASYSAAATSVPNPSSVSAAKSAIRSESDAERLVSLFESV 235
S ++ LR TF I RR A+ A S ++ S + E + +R+V F+
Sbjct: 2 SSLSRVLRGTFNISTIRRFSSAATVTTAVSAAISPPQNSLTSIVNGERNPQRIVEKFKKA 61
Query: 236 TDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYSEAG 415
+ F + ++Y T+ +L +R +E +LE+ R EGF R+I LY +AG
Sbjct: 62 CESERFRNNIAVYDRTVRRLVAAKRLHFVEEILEE-QKKYRDMSKEGFAARIISLYGKAG 120
Query: 416 MVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASY 595
M + A +VF+ +P +RS S ALLSA+ + + ++ F+ + + P I SY
Sbjct: 121 MFENAQKVFDEMPDRNCKRSVLSFNALLSAYGLSKKFDVVEQLFNELPGKLSIKPDIVSY 180
Query: 596 NIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEI 775
N +KALC + + EA+AL D+ +KG++PDI +NTLL KG + +++ ++
Sbjct: 181 NTLIKALCEK--DSLPEAVALLDEFENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKL 238
Query: 776 CKKGLSQNVGTY 811
+K + ++ TY
Sbjct: 239 VEKNVPIDIRTY 250
>ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 423
Score = 124 bits (310), Expect = 5e-26
Identities = 92/263 (34%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Frame = +2
Query: 65 AAPLRRTFTIP---FFRRHFLASYSAAATSVPNPSSVSAA------KSAIRSESDA-ERL 214
AA LRRT RR L + P P++ ++ K++IRS + + L
Sbjct: 4 AAALRRTLAPAPALLLRRQVLLRLLSTQPQQPQPAAATSPAELVRIKNSIRSAATGPDDL 63
Query: 215 VSLFESVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPK-SEGFLIRL 391
+LF +F GDR I+ L + +LA R DL+ +L ++ + P SEGFLIRL
Sbjct: 64 ATLFLRALPNQAFLGDRPIFSLAVTRLASAGRRDLVFSILSSSLTALPAPHPSEGFLIRL 123
Query: 392 IGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYG 571
I LY+ AGM ++ F L ++R ALL+A+ D + AF E
Sbjct: 124 ISLYAAAGMPQHSLSTFR----LVKPATDRVFSALLAAYHDTAQHDLAVTAFRDLPAELS 179
Query: 572 VAPGIASYNIYLKALCSSSANKVDEALALFDQMHDK-GIEPDISCYNTLLDGYSKKGDYA 748
PG+ S+N+ LK++ ++ V A +FD+M DK G++PDI N +L GY K DYA
Sbjct: 180 FQPGVVSHNVLLKSMVATG--DVAGARQVFDEMADKAGVQPDIVSCNEVLRGYLKTADYA 237
Query: 749 GFDKVLKEIC--KKGLSQNVGTY 811
FD++ KEI K+ L NV TY
Sbjct: 238 AFDQLFKEIAGGKRRLKPNVTTY 260
>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 121 bits (303), Expect = 3e-25
Identities = 75/230 (32%), Positives = 123/230 (53%)
Frame = +2
Query: 122 SYSAAATSVPNPSSVSAAKSAIRSESDAERLVSLFESVTDCPSFYGDRSIYKLTIDKLAR 301
S S AAT+ + S K R E + +RLV F+ ++ F IY+ T+ +LA
Sbjct: 13 STSTAATAQATGNLESVFKDIYR-ERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLAS 71
Query: 302 RRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSER 481
+R IE +LE+ + + EGF +RLI LY ++GM D A +VF+ +P +RS
Sbjct: 72 AKRFRWIEEILEEQKKYKDISR-EGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVL 130
Query: 482 SLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALF 661
S ALL A + + ++++ FS + V P + SYNI +K LC + +D A+ +
Sbjct: 131 SFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGS--MDSAVGML 188
Query: 662 DQMHDKGIEPDISCYNTLLDGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 811
D+M K +EPD+ +NTLL+G G + +K+ + KK + ++ +Y
Sbjct: 189 DEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSY 238
>ref|XP_006307708.1| hypothetical protein CARUB_v10009341mg [Capsella rubella]
gi|482576419|gb|EOA40606.1| hypothetical protein
CARUB_v10009341mg [Capsella rubella]
Length = 401
Score = 120 bits (302), Expect = 4e-25
Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 8/260 (3%)
Frame = +2
Query: 56 SPMAAPLRRTFTIPFFRRHFLASYSAAATSVPNPSSVSAA--------KSAIRSESDAER 211
S ++ LR TF I RR A+ A+ T+ S+VSAA S + E + ++
Sbjct: 2 SSLSRFLRGTFNISTIRRFSSAATVASETTAT--SAVSAAISPPQKSLASIVNGERNPKQ 59
Query: 212 LVSLFESVTDCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPKSEGFLIRL 391
+V F+ + F + ++Y T+ +L +R +E +LE+ R EGF R+
Sbjct: 60 IVEKFKKACESERFRNNIAVYDRTVRRLVAAKRLHFVEEILEE-QKKYRDMSKEGFAARI 118
Query: 392 IGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYG 571
I LY +AG+ + A +VF+ +P +RS S ALLSA+ + + +++ F+ +
Sbjct: 119 ISLYGKAGLFENAQKVFDEMPDRNCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS 178
Query: 572 VAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYAG 751
+ P I SYN +KALC + + EA+AL D++ +KG++PDI +NT+L KG +
Sbjct: 179 IKPDIVSYNTLIKALCEK--DSLPEAVALLDEIENKGLKPDIVTFNTVLLSSYLKGQFEL 236
Query: 752 FDKVLKEICKKGLSQNVGTY 811
+++ ++ +K ++ ++ TY
Sbjct: 237 GEEIWAKMVEKNVTIDIRTY 256
>gb|AAL59033.1|AC087182_16 hypothetical protein [Oryza sativa Japonica Group]
gi|31432747|gb|AAP54340.1| expressed protein [Oryza
sativa Japonica Group]
Length = 428
Score = 120 bits (302), Expect = 4e-25
Identities = 94/258 (36%), Positives = 128/258 (49%), Gaps = 7/258 (2%)
Frame = +2
Query: 59 PMAAPLRRTFTIPFFRRHFLASYSAAATSVPNPSSVSAAKSAIRSESDAERLVSLFESVT 238
P A LRR +P H S T S + + A+R E+D R+ SL +
Sbjct: 15 PAAHLLRRFSALPDVD-HPPPPASTPTTPASTRSPILDLQLAVRGEADPARIHSLVATAL 73
Query: 239 ----DCPSFYGDRSIYKLTIDKLARRRRTDLIERVLEKAMHSERTPKSEGFLIRLIGLYS 406
D P +G R ++ L +LAR RR DL +L + S P S G L R I L+
Sbjct: 74 SRPDDYPRLHGSRPLFSLAASRLARLRRPDLAASLLRALLDS--APASPGLLARAISLFP 131
Query: 407 EAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEYGVAPGI 586
D A+R F + S RS+ SL ALLSA G ++ ++ + + +GVAPG
Sbjct: 132 GP---DDALRAFSD--SAPAARSDVSLSALLSALFRAGRVDDVKSTLASAETSFGVAPGR 186
Query: 587 ASYNIYLKALCSSSANKVDEALALFDQMHDK---GIEPDISCYNTLLDGYSKKGDYAGFD 757
AS+N+ L AL +S ++ A L +M K PDI YNT+L GYS +GD GF+
Sbjct: 187 ASHNVLLHALVKNS--ELAAARKLLGEMAKKLKHRPAPDIVSYNTVLAGYSAQGDEEGFE 244
Query: 758 KVLKEICKKGLSQNVGTY 811
K+LKEI K L NV TY
Sbjct: 245 KLLKEISAKKLEPNVVTY 262