BLASTX nr result

ID: Zingiber24_contig00016048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00016048
         (393 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY98981.1| hypothetical protein OsI_20939 [Oryza sativa Indi...    90   3e-16
ref|NP_001056290.1| Os05g0557600 [Oryza sativa Japonica Group] g...    89   6e-16
ref|XP_003567920.1| PREDICTED: probable ubiquitin-conjugating en...    89   8e-16
dbj|BAK04862.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   2e-07
gb|EMS58195.1| putative ubiquitin-conjugating enzyme E2 26 [Trit...    58   1e-06

>gb|EAY98981.1| hypothetical protein OsI_20939 [Oryza sativa Indica Group]
          Length = 509

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 58/152 (38%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
 Frame = +3

Query: 3   IPHEVIELDGEDDTDGVMIIGESTSDYKNKQPVGYDNSWHKQVKDPL-----------SA 149
           +PHEVIELD +DD DGV+IIGE +S  KNKQ VGY   W K  K  L           S 
Sbjct: 48  VPHEVIELDADDDPDGVVIIGEKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYPSK 107

Query: 150 NPVISSA-----------NNGSSQSFEAXXXXXXXXXXXXXXXXXXXXXXXXXGADMSEK 296
           NP I              NN    ++EA                          + + E 
Sbjct: 108 NPDILLGGLKIFQENPFYNNIDDYAYEA--------FEEDYGYDEDEYDDYDYDSTLYES 159

Query: 297 DFNLVLAAKFDDIDLPTGVEAPVPWLKNPAAE 392
           ++N  LAAKFD +D+P GVEAP+PWL+  AAE
Sbjct: 160 EYNFTLAAKFDGLDIPPGVEAPLPWLQTTAAE 191


>ref|NP_001056290.1| Os05g0557600 [Oryza sativa Japonica Group]
           gi|49328017|gb|AAT58718.1| putative
           ubiquitin-conjugating enzyme [Oryza sativa Japonica
           Group] gi|113579841|dbj|BAF18204.1| Os05g0557600 [Oryza
           sativa Japonica Group] gi|222632521|gb|EEE64653.1|
           hypothetical protein OsJ_19507 [Oryza sativa Japonica
           Group]
          Length = 509

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 57/152 (37%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
 Frame = +3

Query: 3   IPHEVIELDGEDDTDGVMIIGESTSDYKNKQPVGYDNSWHKQVKDPL-----------SA 149
           +PHEVIELD +DD DGV+IIGE +S  KNKQ VGY   W K  K  L           S 
Sbjct: 48  VPHEVIELDADDDPDGVVIIGEKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYPSK 107

Query: 150 NPVISSA-----------NNGSSQSFEAXXXXXXXXXXXXXXXXXXXXXXXXXGADMSEK 296
           NP I              NN    ++EA                          + + E 
Sbjct: 108 NPDILLGGLKIFQENPFYNNIDDYAYEA--------FEEDYGYDEDEYDDYDYDSTLYES 159

Query: 297 DFNLVLAAKFDDIDLPTGVEAPVPWLKNPAAE 392
           ++N  LA+KFD +D+P GVEAP+PWL+  AAE
Sbjct: 160 EYNFTLASKFDGLDIPPGVEAPLPWLQTTAAE 191


>ref|XP_003567920.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like
           [Brachypodium distachyon]
          Length = 509

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 53/141 (37%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
 Frame = +3

Query: 3   IPHEVIELDGEDDTDGVMIIGESTSDYKNKQPVGYDNSWHKQVKDPLS---ANPVISSAN 173
           +PHEVI+LDG+DD DGV IIG+     KNKQ +GY   W K VK  ++   A P   ++ 
Sbjct: 49  VPHEVIDLDGDDDPDGVTIIGQKAPAEKNKQALGYPLDWPKHVKTSVADDIAGPSTYASK 108

Query: 174 N----GSSQSFEAXXXXXXXXXXXXXXXXXXXXXXXXXGAD----MSEKDFNLVLAAKFD 329
           N    G  +                             G D    + E ++N  L+AKFD
Sbjct: 109 NTAIMGGLKKVIEYDYDDFTFDSFEEDGFFEDEYDYEDGYDYDATLFESEYNYNLSAKFD 168

Query: 330 DIDLPTGVEAPVPWLKNPAAE 392
           D+D+P GVEAP+PWL+  AAE
Sbjct: 169 DLDIPPGVEAPLPWLQKTAAE 189


>dbj|BAK04862.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 530

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = +3

Query: 6   PHEVIELDGEDDTDGVMIIGESTSDYKNKQPVGYDNSWHKQVKDPLSANPV 158
           PHE+IELD +DD DGV II   T DYKNKQ VGY  ++ K  K  L+A  +
Sbjct: 47  PHEIIELDADDDPDGVTIIDAKTPDYKNKQAVGYPVNYRKNAKIDLAAEDI 97


>gb|EMS58195.1| putative ubiquitin-conjugating enzyme E2 26 [Triticum urartu]
          Length = 534

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = +3

Query: 6   PHEVIELDGEDDTDGVMIIGESTSDYKNKQPVGYDNSWHKQVKDPLSANPV 158
           PHE+IELD +DD DGV II   TSDYKNKQ VG+  +  K  K  L+A  +
Sbjct: 65  PHEIIELDADDDHDGVTIIDAKTSDYKNKQAVGHPVNCWKNAKIGLAAEDI 115


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