BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00016007
         (515 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_006647529.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|XP_004955088.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protei...    80   4e-13
ref|XP_006306508.1| hypothetical protein CARUB_v10012498mg [Caps...    80   4e-13
gb|ABK26521.1| unknown [Picea sitchensis]                              79   8e-13
ref|XP_002302000.2| pentatricopeptide repeat-containing family p...    78   1e-12
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr...    78   1e-12
emb|CBI29560.3| unnamed protein product [Vitis vinifera]               78   1e-12
ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [S...    78   1e-12
ref|XP_003535453.2| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004301492.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group] g...    77   2e-12
gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japo...    77   2e-12
gb|ESW16129.1| hypothetical protein PHAVU_007G131600g [Phaseolus...    77   3e-12
ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12

>ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Brachypodium distachyon]
          Length = 523

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQ-LGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEI 274
           + +Y E G WE+V  +RK + + + GKKLPGCSWIEV+++ H+FYSGD  HPE   IY+ 
Sbjct: 454 ANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSWIEVDRKTHRFYSGDDAHPESEDIYDT 513

Query: 273 LDELVELME 247
           LDEL   ME
Sbjct: 514 LDELAASME 522


>ref|XP_006647529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Oryza brachyantha]
          Length = 530

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQ-LGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEI 274
           + +Y E G WE+V  VRK + + + GKKLPGCSWIEV +R H+FYSGD  HPE   IY  
Sbjct: 456 ANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVNRRTHRFYSGDDGHPESEDIYST 515

Query: 273 LDELVELME 247
           LDEL   ME
Sbjct: 516 LDELATSME 524


>ref|XP_004955088.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Setaria italica]
          Length = 530

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLG-GKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEI 274
           + +Y E G WE+V  VRK + +   GKKLPGCSWIEV++++H+FYSGD  HP+   IY+ 
Sbjct: 461 ANVYSEGGLWEEVRKVRKFVKEETIGKKLPGCSWIEVDRKIHRFYSGDDAHPQSEDIYDT 520

Query: 273 LDELVELME 247
           LD+L   ME
Sbjct: 521 LDDLAASME 529


>gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 527

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           + +Y E GKW++V  VRK+L +    K+PGCSWIEV+ +VHQFYS D  HP   +IY IL
Sbjct: 461 ANLYGELGKWDEVRKVRKKLKEQNSYKIPGCSWIEVDSQVHQFYSVDKTHPRTDEIYNIL 520

Query: 270 DELVEL 253
           + +V L
Sbjct: 521 ESVVGL 526


>ref|XP_006306508.1| hypothetical protein CARUB_v10012498mg [Capsella rubella]
           gi|482575219|gb|EOA39406.1| hypothetical protein
           CARUB_v10012498mg [Capsella rubella]
          Length = 538

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/67 (50%), Positives = 44/67 (65%)
 Frame = -3

Query: 459 ASCSQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIY 280
           A  + +Y+E GKWE+    RKR+      K PGCSWIE++  VHQFYS D  HP+  +IY
Sbjct: 470 AMMANLYVEMGKWEEAREARKRIKHQNAYKTPGCSWIEIDNEVHQFYSLDKSHPKNIEIY 529

Query: 279 EILDELV 259
           EILD L+
Sbjct: 530 EILDSLI 536


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/74 (47%), Positives = 46/74 (62%)
 Frame = -3

Query: 465 TMASCSQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQ 286
           T    S IY   G+W+D G VRK +     KK PGCSWIEV+ +VH F  GD+ HP++ +
Sbjct: 203 TYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEE 262

Query: 285 IYEILDELVELMEA 244
           IYE L+ L   M+A
Sbjct: 263 IYETLETLTLQMKA 276


>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344162|gb|EEE81273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 797

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/69 (52%), Positives = 43/69 (62%)
 Frame = -3

Query: 465 TMASCSQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQ 286
           T    S +Y   G+W D+  VRK +   G KK PGCSWIEVE +VH F  GD  HPEV Q
Sbjct: 630 TYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQ 689

Query: 285 IYEILDELV 259
           IY  L++LV
Sbjct: 690 IYNYLEQLV 698


>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 736

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           S +Y   G+W+DV  +R RLN  G KK+PGCS IEV   VH+F  GD +HP+   IYE+L
Sbjct: 574 SNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEML 633

Query: 270 DELVELME 247
           DE+  L+E
Sbjct: 634 DEIDALLE 641


>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
           gi|557554208|gb|ESR64222.1| hypothetical protein
           CICLE_v10010823mg [Citrus clementina]
          Length = 736

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           S +Y   G+W+DV  +R RLN  G KK+PGCS IEV   VH+F  GD +HP+   IYE+L
Sbjct: 574 SNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEML 633

Query: 270 DELVELME 247
           DE+  L+E
Sbjct: 634 DEIDALLE 641


>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           S +Y   G+WE+V  VRK +   G KK PGCSWIEV+KR+H F + D+ HP + +IYE L
Sbjct: 526 SNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFL 585

Query: 270 DELVELMEA*FFLSTA---*FLQIYSLRYHFARCWSVQSNCHCY 148
           +E+   M+   ++       F+  +++ +HF     V   C  Y
Sbjct: 586 EEMSGKMKRAGYVPDGEFFFFINRHNMYHHFYSKIEVDRFCVLY 629


>ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
           gi|241934015|gb|EES07160.1| hypothetical protein
           SORBIDRAFT_04g026300 [Sorghum bicolor]
          Length = 530

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLG-GKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEI 274
           + +Y E G WE+V  VRK + +   GKKLPGCSWIEV+++ H+FYSGD  HPE   IY+ 
Sbjct: 461 ANVYSEGGLWEEVRKVRKFVKEENIGKKLPGCSWIEVDRKTHRFYSGDDAHPESENIYDT 520

Query: 273 LDELVELME 247
           L++L   M+
Sbjct: 521 LEDLAASMD 529


>ref|XP_003535453.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 787

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/72 (48%), Positives = 45/72 (62%)
 Frame = -3

Query: 465 TMASCSQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQ 286
           T  S S +Y   G+W++V  VRK + + G KK PGCSWIEVE  VH F   D +HPEV  
Sbjct: 620 TYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHA 679

Query: 285 IYEILDELVELM 250
           +Y  L++LV  M
Sbjct: 680 VYRYLEQLVHEM 691


>ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cicer arietinum]
          Length = 737

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/68 (50%), Positives = 46/68 (67%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           S IY   GKW++V  +R RLN  G KK+PGC+ IE++  VH+F  GD  HPE   IY +L
Sbjct: 575 SNIYAGAGKWDEVARIRTRLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPECKNIYSML 634

Query: 270 DELVELME 247
           DE+ +L+E
Sbjct: 635 DEIDKLLE 642


>ref|XP_004301492.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like, partial [Fragaria vesca subsp. vesca]
          Length = 800

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -3

Query: 465 TMASCSQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQ 286
           T    S +Y   G+W+DV  VR  + + G KK PGCSWI+V+  VH F  GDT HPEV +
Sbjct: 633 TYVLLSNLYAALGRWDDVAKVRNLMRERGVKKEPGCSWIDVDNMVHVFLVGDTRHPEVNE 692

Query: 285 IYEILDELV 259
           +Y+ L++LV
Sbjct: 693 VYKYLEQLV 701


>ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
           gi|47847758|dbj|BAD21535.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|47847799|dbj|BAD21575.1| putative
           pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|113536988|dbj|BAF09371.1|
           Os02g0620800 [Oryza sativa Japonica Group]
          Length = 530

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQ-LGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEI 274
           + +Y E G WE+V  VRK + + + GKKLPGCSWIEV+++  +FYSGD  HPE   IY+ 
Sbjct: 456 ANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDT 515

Query: 273 LDELVELME 247
           LD+L   ME
Sbjct: 516 LDKLATTME 524


>gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
          Length = 748

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQ-LGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEI 274
           + +Y E G WE+V  VRK + + + GKKLPGCSWIEV+++  +FYSGD  HPE   IY+ 
Sbjct: 674 ANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDT 733

Query: 273 LDELVELME 247
           LD+L   ME
Sbjct: 734 LDKLATTME 742


>gb|ESW16129.1| hypothetical protein PHAVU_007G131600g [Phaseolus vulgaris]
          Length = 787

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/72 (48%), Positives = 45/72 (62%)
 Frame = -3

Query: 465 TMASCSQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQ 286
           T  S S +Y   G+W++V  VRK + + G KK PGCSWIEVE  VH F   D +HPEV  
Sbjct: 620 TYISLSNMYATLGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHA 679

Query: 285 IYEILDELVELM 250
           +Y+ L+ LV  M
Sbjct: 680 VYKYLEHLVHEM 691


>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 358

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 32/63 (50%), Positives = 44/63 (69%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           S +Y   G+WE+V  VRK +   G KK PGCSWIEV+KR+H F + D+ HP + +IYE L
Sbjct: 193 SNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFL 252

Query: 270 DEL 262
           +E+
Sbjct: 253 EEM 255


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 32/63 (50%), Positives = 44/63 (69%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           S +Y   G+WE+V  VRK +   G KK PGCSWIEV+KR+H F + D+ HP + +IYE L
Sbjct: 554 SNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFL 613

Query: 270 DEL 262
           +E+
Sbjct: 614 EEM 616


>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/66 (50%), Positives = 43/66 (65%)
 Frame = -3

Query: 450 SQIYIECGKWEDVGNVRKRLNQLGGKKLPGCSWIEVEKRVHQFYSGDTIHPEVGQIYEIL 271
           + IY E GKW++V  VRK L +    K PGCSWIE++ +VHQFYS D  HP   +IY  L
Sbjct: 507 ANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTL 566

Query: 270 DELVEL 253
           + L+ L
Sbjct: 567 ESLISL 572