BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00015954
         (490 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu...   149   4e-34
emb|CBI22375.3| unnamed protein product [Vitis vinifera]              145   5e-33
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   145   5e-33
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p...   144   2e-32
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   144   2e-32
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   139   3e-31
ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]     137   2e-30
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi...   135   6e-30
ref|XP_006857320.1| hypothetical protein AMTR_s00067p00076830 [A...   132   4e-29
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ...   131   1e-28
gb|ESW16008.1| hypothetical protein PHAVU_007G121900g [Phaseolus...   129   4e-28
gb|EPS74045.1| hypothetical protein M569_00706, partial [Genlise...   129   5e-28
ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr...   125   4e-27
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-25
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...   119   5e-25

>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 586

 Score =  153 bits (387), Expect = 2e-35
 Identities = 72/103 (69%), Positives = 89/103 (86%)
 Frame = -3

Query: 311 SAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 132
           SAE K+TQ Q  D K++H MK+L+RSCKAG++NE++YFLE MV KGYK DVILCTKLIKG
Sbjct: 57  SAEPKSTQLQNYDFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKGYKPDVILCTKLIKG 116

Query: 131 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
             +SR+++KA+RVM ILE +GEPD+FAYNAL+SGFCKA RIES
Sbjct: 117 FFNSRNIEKAIRVMQILEQYGEPDLFAYNALISGFCKANRIES 159


>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
           gi|550316702|gb|ERP48891.1| hypothetical protein
           POPTR_0019s03630g [Populus trichocarpa]
          Length = 586

 Score =  149 bits (376), Expect = 4e-34
 Identities = 72/101 (71%), Positives = 84/101 (83%)
 Frame = -3

Query: 305 EAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLC 126
           E K T   + D KE+H MKLL+RSCKAGK NESLYFLE MV KGY+ DVI+CTKLIKG  
Sbjct: 60  ETKPTHVLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFF 119

Query: 125 SSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
           +SR+++KA RVM+ILE HGEPDVFAYNA++SGFCKA RIES
Sbjct: 120 NSRNIEKATRVMEILEKHGEPDVFAYNAVISGFCKANRIES 160


>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  145 bits (366), Expect = 5e-33
 Identities = 70/103 (67%), Positives = 85/103 (82%)
 Frame = -3

Query: 311 SAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 132
           SAEA+    Q+ D +E+H MKLL+RSCKAGKFNESLYFLE +V KGY  DVILCTKLIKG
Sbjct: 53  SAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKG 112

Query: 131 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
             + ++++KA RVM+ILESH EPDVFAYNA++SGFCK  RIE+
Sbjct: 113 FFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEA 155


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  145 bits (366), Expect = 5e-33
 Identities = 70/103 (67%), Positives = 85/103 (82%)
 Frame = -3

Query: 311 SAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 132
           SAEA+    Q+ D +E+H MKLL+RSCKAGKFNESLYFLE +V KGY  DVILCTKLIKG
Sbjct: 53  SAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKG 112

Query: 131 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
             + ++++KA RVM+ILESH EPDVFAYNA++SGFCK  RIE+
Sbjct: 113 FFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEA 155


>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 586

 Score =  144 bits (362), Expect = 2e-32
 Identities = 66/102 (64%), Positives = 84/102 (82%)
 Frame = -3

Query: 311 SAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 132
           SAE + T   + D KE+H MKLL+RSCKAGK+NE+ YFLE MVGKGYK DV+LCTK+IKG
Sbjct: 57  SAETRPTHLLSFDFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKG 116

Query: 131 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIE 6
             + R+V+KA RV++ILE +GEPDVFAYNA++SGFCK  R++
Sbjct: 117 FFNGRNVEKATRVIEILEKYGEPDVFAYNAIISGFCKMNRLD 158



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = -3

Query: 332 RSYQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVIL 153
           R+++ + S +A+  QP  +      Y  LL      GK+ E    +  MV +G + +V+ 
Sbjct: 264 RAFKFVRSLKARGCQPDVIS-----YNILLRVLLNQGKWAEGEKLVTEMVSRGCEPNVVT 318

Query: 152 CTKLIKGLCSSRSVDKAVRVMDILESHG-EPDVFAYNALVSGFCKAGRIE 6
            + LI  LC    +++AV V+ +++  G  PD ++Y+ L+S FCK GR++
Sbjct: 319 YSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLD 368


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/103 (66%), Positives = 85/103 (82%)
 Frame = -3

Query: 311 SAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 132
           SAEA+    Q+ D +E+H MKLL+RSCKAGKFNESLYFLE +V KGY  DVILCTKLIKG
Sbjct: 63  SAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKG 122

Query: 131 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
             + ++++KA RVM+ILESH EPDVFAYNA++SGFCK  +IE+
Sbjct: 123 FFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEA 165


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  139 bits (351), Expect = 3e-31
 Identities = 70/113 (61%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
 Frame = -3

Query: 338 RIRSYQAM-ASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLD 162
           ++R+ Q +  SAE + T   + D KE H MKLL+RSC+AGK+NESLYFLE MV KGY  D
Sbjct: 44  KVRNPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPD 103

Query: 161 VILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
           VILCTKLIKG  +SR++ KA RVM+ILE +G+PDVFAYNAL+SGF KA ++E+
Sbjct: 104 VILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLEN 156


>ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  137 bits (345), Expect = 1e-30
 Identities = 69/145 (47%), Positives = 96/145 (66%)
 Frame = -3

Query: 437 MSISLRVSFAPHLLLHSTFRRNSSGRRCRGFTIRIRSYQAMASAEAKATQPQTLDSKESH 258
           M+ ++   F P    H     + S  R         +     S+ +K  Q  TLD K++H
Sbjct: 1   MTTTVSTDFLPLFNPHPNRTNSHSNSRTLPILNETTNINRTLSSVSKP-QTHTLDFKDTH 59

Query: 257 YMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILE 78
            +K LSRSCKAG FNESLYFL ++V KG+K DV+LCTKLI GL +S+++DKA++VM ILE
Sbjct: 60  LLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILE 119

Query: 77  SHGEPDVFAYNALVSGFCKAGRIES 3
           +HG PD+ AYNA+++GFC+A RI+S
Sbjct: 120 NHGHPDLIAYNAIITGFCRANRIDS 144



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
 Frame = -3

Query: 326 YQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCT 147
           Y+ M+   A+  +   +      Y  L+S  C+ GK  E +  L+ M  KG K D     
Sbjct: 286 YELMSDMVARGCEANVVT-----YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYD 340

Query: 146 KLIKGLCSSRSVDKAVRVMDILESHG-EPDVFAYNALVSGFCKAGRIE 6
            LI  LC    VD A+ V+D++ S G  PD+  YN +++  CK  R +
Sbjct: 341 PLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 388


>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
          Length = 587

 Score =  137 bits (344), Expect = 2e-30
 Identities = 62/103 (60%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = -3

Query: 311 SAEAKATQPQT-LDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIK 135
           S E K+   Q+  D  ESH +K+++RSCK+GK+NE+LYFLE MV KG+K DVILCTK+++
Sbjct: 57  SVETKSPNSQSNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMR 116

Query: 134 GLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIE 6
           G  +SR++ KA+RVM+ILE HGEPD+F+YNA++SGFCKA R+E
Sbjct: 117 GFFNSRNIPKAIRVMEILEKHGEPDLFSYNAMISGFCKANRVE 159



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = -3

Query: 332 RSYQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVIL 153
           R+++ + S EAK   P  +      Y  LL      GK+++    L  MV +G + +V+ 
Sbjct: 265 RAFEFVRSLEAKGCSPNVIS-----YNILLRALLNRGKWSDGEKILSDMVSRGCEPNVVT 319

Query: 152 CTKLIKGLCSSRSVDKAVRVMDILESHG-EPDVFAYNALVSGFCKAGRIE 6
            + LI  LC    V+ AV V+  ++  G  PD ++Y+ L+S FCK GR++
Sbjct: 320 YSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLD 369


>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  135 bits (340), Expect = 6e-30
 Identities = 67/125 (53%), Positives = 95/125 (76%)
 Frame = -3

Query: 377 RNSSGRRCRGFTIRIRSYQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYF 198
           R+ S   CR F+ +       +SAE +      LD++++H MKLL+RSC+AGK NESLYF
Sbjct: 26  RSDSIPACR-FSNKTHLRNVTSSAEFRQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYF 84

Query: 197 LEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKA 18
           LE +V KG+K DV+LCTKLIKG  +SR++ KA+RVM+ILE++G+PDV++YNA++SGF KA
Sbjct: 85  LESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKA 144

Query: 17  GRIES 3
            +I+S
Sbjct: 145 NQIDS 149


>ref|XP_006857320.1| hypothetical protein AMTR_s00067p00076830 [Amborella trichopoda]
           gi|548861413|gb|ERN18787.1| hypothetical protein
           AMTR_s00067p00076830 [Amborella trichopoda]
          Length = 602

 Score =  132 bits (333), Expect = 4e-29
 Identities = 61/113 (53%), Positives = 84/113 (74%)
 Frame = -3

Query: 341 IRIRSYQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLD 162
           +R  +  A      ++ Q  + D  E+HY+KLL+RSCK+GK +E+LYFL+YMV KG+  D
Sbjct: 40  LRALAESATCDRTFRSNQLNSSDFNETHYIKLLNRSCKSGKLSETLYFLDYMVNKGHHPD 99

Query: 161 VILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
           VILCTKLIKG CS+++ +KA+RVM ILES+G PD+FAYN L++G CK   I+S
Sbjct: 100 VILCTKLIKGFCSAKNAEKAMRVMKILESYGNPDIFAYNTLINGLCKLNLIDS 152


>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480008|gb|AES61211.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  131 bits (329), Expect = 1e-28
 Identities = 59/101 (58%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
 Frame = -3

Query: 305 EAKATQ-PQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGL 129
           E K T+  Q  D +++++MK L+RSCK+ K++ESLYFL++MV +GYK DVILCTKLIKG 
Sbjct: 63  ETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGF 122

Query: 128 CSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIE 6
            + + ++KA++VM+ILE HG+PDVFAYNA++SGFCKA R++
Sbjct: 123 FNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVD 163


>gb|ESW16008.1| hypothetical protein PHAVU_007G121900g [Phaseolus vulgaris]
          Length = 570

 Score =  129 bits (324), Expect = 4e-28
 Identities = 56/97 (57%), Positives = 80/97 (82%)
 Frame = -3

Query: 293 TQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRS 114
           T+P+  D +++H+M+ L+R C+ GK+ E+LYFLE MV +GYK DVILCTKLIKGL +S+ 
Sbjct: 62  TRPRHYDFRDTHHMRALNRLCRTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKK 121

Query: 113 VDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
            +KAV+VM+ILE HG+PD FAYNA++SGFC++ R ++
Sbjct: 122 TEKAVQVMEILEQHGDPDAFAYNAVISGFCRSDRFDA 158


>gb|EPS74045.1| hypothetical protein M569_00706, partial [Genlisea aurea]
          Length = 515

 Score =  129 bits (323), Expect = 5e-28
 Identities = 57/91 (62%), Positives = 75/91 (82%)
 Frame = -3

Query: 275 DSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVR 96
           D  E+ ++KLL RSCK+G ++E LYFLE +V  G++ D +LCTKL+KG  SS+SVDKAVR
Sbjct: 1   DFNETRFLKLLKRSCKSGNYDEGLYFLEKLVSLGFRADAVLCTKLVKGFLSSKSVDKAVR 60

Query: 95  VMDILESHGEPDVFAYNALVSGFCKAGRIES 3
           VM ILE HGEPDV+AYNA+++G CKAGRI++
Sbjct: 61  VMGILERHGEPDVYAYNAVINGLCKAGRIDA 91



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = -3

Query: 248 LLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHG 69
           ++S  C+ G   E++  L+ M+ +GY  D      L+ GLC    +D A+ +MD + S+G
Sbjct: 255 IVSHLCRYGLLEEAIGLLKLMIDEGYTPDSYTYDPLVSGLCREGRIDAAIGLMDHMISNG 314

Query: 68  -EPDVFAYNALVSGFCKAG 15
             PD+  YNA++S  CK G
Sbjct: 315 CLPDIVNYNAVLSALCKNG 333


>ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  127 bits (320), Expect = 1e-27
 Identities = 58/96 (60%), Positives = 78/96 (81%)
 Frame = -3

Query: 290 QPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSV 111
           Q Q  D +++H+MK L+R CK GK+ E+LYFLE MV +GYK DVILCTKLIKGL +S+  
Sbjct: 69  QQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRT 128

Query: 110 DKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIES 3
           +KAVRVM+ILE +G+PD FAYNA++SGFC++ R ++
Sbjct: 129 EKAVRVMEILEQYGDPDSFAYNAVISGFCRSDRFDA 164


>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
           gi|557544927|gb|ESR55905.1| hypothetical protein
           CICLE_v10019446mg [Citrus clementina]
          Length = 583

 Score =  125 bits (315), Expect = 4e-27
 Identities = 64/116 (55%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
 Frame = -3

Query: 341 IRIRSYQAMASAEAKATQPQT----LDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKG 174
           I  +S + +  + +  T+P T     D KE+ +MKL+ RS +AGKF+ESLYF+E MV  G
Sbjct: 40  INPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG 99

Query: 173 YKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIE 6
            K DV++CTKLIK     R  +KAVRVM+ILE +GEPDVFAYNAL+SGFCKA +IE
Sbjct: 100 CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIE 155



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
 Frame = -3

Query: 332 RSYQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVIL 153
           +++Q + S E++  QP  +      Y  LL      GK+ E    +  M+ +G + +V+ 
Sbjct: 261 QAFQFVRSLESRGCQPDVIS-----YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 315

Query: 152 CTKLIKGLCSSRSVDKAVRVMDILESHG-EPDVFAYNALVSGFCKAGRIE 6
            + LI  LC     + AV V+   +  G  PD ++Y+ L+S +CK GR++
Sbjct: 316 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 365


>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Citrus sinensis]
          Length = 583

 Score =  124 bits (312), Expect = 1e-26
 Identities = 63/116 (54%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
 Frame = -3

Query: 341 IRIRSYQAMASAEAKATQPQT----LDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKG 174
           I  +S + +  + +  T+P T     D KE+ +MKL+ +S +AGKF+ESLYF+E MV  G
Sbjct: 40  INPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKKSFRAGKFDESLYFIESMVANG 99

Query: 173 YKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIE 6
            K DV++CTKLIK     R  +KAVRVM+ILE +GEPDVFAYNAL+SGFCKA +IE
Sbjct: 100 CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIE 155



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
 Frame = -3

Query: 332 RSYQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVIL 153
           +++Q + S E++  QP  +      Y  LL      GK+ E    +  M+ +G + +V+ 
Sbjct: 261 QAFQFVRSLESRGCQPDVIS-----YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 315

Query: 152 CTKLIKGLCSSRSVDKAVRVMDILESHG-EPDVFAYNALVSGFCKAGRIE 6
            + LI  LC     + AV V+   +  G  PD ++Y+ L+S +CK GR++
Sbjct: 316 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 365


>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Solanum tuberosum]
          Length = 583

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/88 (63%), Positives = 70/88 (79%)
 Frame = -3

Query: 269 KESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVM 90
           + +H MK+L+ SCK GK++E+LY LE  +  GYK DVILCTKLIKG C+S++ DK V+VM
Sbjct: 61  RPTHDMKVLNWSCKVGKYDETLYLLECKLKSGYKPDVILCTKLIKGFCNSKNSDKGVKVM 120

Query: 89  DILESHGEPDVFAYNALVSGFCKAGRIE 6
            ILE  GEPDVFAYNAL+SGFCK  +IE
Sbjct: 121 QILEQFGEPDVFAYNALISGFCKMNKIE 148



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -3

Query: 257 YMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILE 78
           Y  L+S  C+ GK +E++  L+ M+ KG   D      LI   C    +D A++ +D + 
Sbjct: 311 YSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMI 370

Query: 77  SHG-EPDVFAYNALVSGFCKAGRIE 6
           S+G  PD+  YN ++S  CK G+ +
Sbjct: 371 SNGCLPDIVNYNTILSTMCKKGKAD 395


>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 575

 Score =  119 bits (299), Expect = 3e-25
 Identities = 58/90 (64%), Positives = 71/90 (78%)
 Frame = -3

Query: 275 DSKESHYMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVR 96
           +++ SH MK+L+ SCK GK++E+LY LE  V  GYK DVILCTKLIKG  +S++ DK V+
Sbjct: 54  ENRGSHDMKVLNWSCKVGKYDETLYLLECKVKSGYKPDVILCTKLIKGFFNSKNSDKGVK 113

Query: 95  VMDILESHGEPDVFAYNALVSGFCKAGRIE 6
           VM ILE  GEPDVFAYNALVSGFCK  +IE
Sbjct: 114 VMQILEQFGEPDVFAYNALVSGFCKMNKIE 143



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -3

Query: 257 YMKLLSRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILE 78
           Y  L+S  C+ GK +E++  L+ MV KG   D      LI   C    +D A++ +D + 
Sbjct: 306 YSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLDYMI 365

Query: 77  SHG-EPDVFAYNALVSGFCKAGRIE 6
           ++G  PD+  YN ++S  CK G+ +
Sbjct: 366 TNGCLPDIVNYNTILSTMCKKGKAD 390


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330308|gb|EFH60727.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  119 bits (297), Expect = 5e-25
 Identities = 61/123 (49%), Positives = 83/123 (67%)
 Frame = -3

Query: 374 NSSGRRCRGFTIRIRSYQAMASAEAKATQPQTLDSKESHYMKLLSRSCKAGKFNESLYFL 195
           +SSG R     ++  +  A    E +    Q+L  +++  +K+  RSC++G + ESL+ L
Sbjct: 53  SSSGAR----NLQATTTDAAIPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLL 108

Query: 194 EYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAG 15
           E MV KGY  DVILCTKLIKG  + R+V KAVRVM+ILE  G+PDVFAYNAL++GFCK  
Sbjct: 109 ETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMN 168

Query: 14  RIE 6
           RI+
Sbjct: 169 RID 171