BLASTX nr result
ID: Zingiber24_contig00015769
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00015769
(653 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEG74554.1| predicted protein [Phoenix dactylifera] 97 4e-18
gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium h... 91 4e-16
ref|NP_001046383.1| Os02g0234800 [Oryza sativa Japonica Group] g... 88 2e-15
gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma c... 87 4e-15
ref|XP_006647106.1| PREDICTED: U2 small nuclear ribonucleoprotei... 85 2e-14
ref|XP_003562166.1| PREDICTED: U2 small nuclear ribonucleoprotei... 84 3e-14
gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [... 84 5e-14
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|5... 82 1e-13
ref|XP_004981025.1| PREDICTED: U2 small nuclear ribonucleoprotei... 82 2e-13
gb|ESW25022.1| hypothetical protein PHAVU_003G001500g [Phaseolus... 79 9e-13
ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotei... 79 1e-12
gb|ESW10753.1| hypothetical protein PHAVU_009G235000g, partial [... 78 2e-12
ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [A... 78 2e-12
dbj|BAJ86838.1| predicted protein [Hordeum vulgare subsp. vulgar... 78 2e-12
ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citr... 77 3e-12
ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citr... 77 3e-12
ref|XP_006423872.1| hypothetical protein CICLE_v10028992mg [Citr... 77 3e-12
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei... 77 3e-12
ref|NP_001242503.1| uncharacterized protein LOC100779162 [Glycin... 76 8e-12
ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotei... 76 1e-11
>gb|AEG74554.1| predicted protein [Phoenix dactylifera]
Length = 348
Score = 97.1 bits (240), Expect = 4e-18
Identities = 57/101 (56%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +1
Query: 4 EVPTEPNVSQLEQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNL 180
E P +VS+ E+ PKV PT EQITAIKAAI+NSQTLEEVARLEKALK GQIP EF
Sbjct: 117 EAPDVSDVSKAEEAPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALKSGQIPAEFQIP 176
Query: 181 GKETNASEDMVV-DTVKADDQNEGNEVQDNDQNEDVQPIEQ 300
K+ + D + D QNE N+ QD + ED PIEQ
Sbjct: 177 DKDVHMDPTHAKDDKMDMDGQNEVNDAQDQKETEDPTPIEQ 217
>gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium hirsutum]
Length = 285
Score = 90.5 bits (223), Expect = 4e-16
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Frame = +1
Query: 4 EVPTEPNVSQLEQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNL 180
EVP V++ EQ PKV PT EQI AIKAAI+NSQTLEEVARLEKAL+ GQ+P +
Sbjct: 183 EVPNVSEVAEEEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALQTGQLPADLKIP 242
Query: 181 GKETNASEDMVVDTVKADDQNEGNEVQDN---DQNEDVQPIEQD 303
G +TNA++ V +D QNE N DN D+NE+ P+EQ+
Sbjct: 243 GDDTNAAKGGDEKKV-SDIQNESNVEPDNMDEDKNEEPAPMEQE 285
>ref|NP_001046383.1| Os02g0234800 [Oryza sativa Japonica Group]
gi|50251223|dbj|BAD27667.1| putative U2 snRNP protein A'
[Oryza sativa Japonica Group]
gi|113535914|dbj|BAF08297.1| Os02g0234800 [Oryza sativa
Japonica Group] gi|215697898|dbj|BAG92091.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218190368|gb|EEC72795.1| hypothetical protein
OsI_06481 [Oryza sativa Indica Group]
gi|222622491|gb|EEE56623.1| hypothetical protein
OsJ_06008 [Oryza sativa Japonica Group]
Length = 284
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Frame = +1
Query: 37 EQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNLGKETN---ASE 204
EQ PKV PT EQITAIKAAI+NSQTLEEVARLEKAL GQIP EF + N ASE
Sbjct: 194 EQGPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALSTGQIPAEFAIPKPDANMADASE 253
Query: 205 DMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
+ + ++ D QN+ N + QNE+ PIE+D
Sbjct: 254 E--TEKMETDGQNQENGADEKKQNEESTPIEED 284
>gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma cacao]
Length = 286
Score = 87.0 bits (214), Expect = 4e-15
Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Frame = +1
Query: 4 EVPTEPNVSQLEQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNL 180
EVP V+Q EQ PKV PT EQI AIKAAI+NSQTLEEVARLEKALK GQ+P +
Sbjct: 183 EVPKVSEVAQEEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALKTGQLPADLKIP 242
Query: 181 GKETNASEDMVVDTVKADDQNEGNEVQDN---DQNEDVQPIEQD 303
G +T A+ + +D QN+ N +N +NE+ P+EQ+
Sbjct: 243 GDDTGANVTGKDEKKVSDSQNKSNVEPNNVEEQKNEEPVPMEQE 286
>ref|XP_006647106.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Oryza
brachyantha]
Length = 284
Score = 85.1 bits (209), Expect = 2e-14
Identities = 49/91 (53%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = +1
Query: 37 EQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNLGKETNASE-DM 210
EQ PKV PT EQITAIKAAI+NSQTLEEV RLEKAL G +P EF + N +E
Sbjct: 194 EQGPKVVAPTPEQITAIKAAIVNSQTLEEVVRLEKALSTGIVPAEFAIPKPDANMAETSE 253
Query: 211 VVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
D ++ D QN+ N + QNE+ PIE+D
Sbjct: 254 ETDKMETDGQNQENGADEQKQNEESTPIEED 284
>ref|XP_003562166.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Brachypodium
distachyon]
Length = 283
Score = 84.3 bits (207), Expect = 3e-14
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +1
Query: 37 EQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNLGKETNASE-DM 210
EQ PKV PT EQITAIKAAI+NSQTLEEVARLEKAL G IP EF +TN +E
Sbjct: 193 EQGPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALSTGLIPAEFATPKPDTNMAEASE 252
Query: 211 VVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
+ ++ D + + N + QNE+ PI++D
Sbjct: 253 EAEKMETDGEKQENGADEEKQNEESTPIQED 283
>gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [Prunus persica]
Length = 285
Score = 83.6 bits (205), Expect = 5e-14
Identities = 49/103 (47%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Frame = +1
Query: 4 EVPTEPNVSQLEQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNL 180
EVP +V++ +Q PKV PT EQI AIKAAI+NSQTLEEVARLE+ALK GQ+P + L
Sbjct: 183 EVPNVSDVAEEQQTPKVVAPTPEQIMAIKAAIVNSQTLEEVARLEQALKSGQLPADLKIL 242
Query: 181 GKETNASEDMV-VDTVKADDQNEGNEVQDNDQ--NEDVQPIEQ 300
+T + V D ++ + +NE N +D D+ ++ +P+EQ
Sbjct: 243 DDDTETNSVKVNDDKMEVNSENEANAPKDVDEQKKDEAEPMEQ 285
>ref|XP_002303732.1| predicted protein [Populus trichocarpa]
gi|566256109|ref|XP_006388045.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
gi|550309315|gb|ERP46959.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
Length = 284
Score = 82.0 bits (201), Expect = 1e-13
Identities = 50/103 (48%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 4 EVPTEPNVSQLEQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNL 180
E+P P V++ +Q PKV PT EQI AIKAAI+NSQTLEEVARLEKAL GQ+P + L
Sbjct: 183 EIPNIPEVAEEQQAPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLKIL 242
Query: 181 GKETNASEDMVVDTVKADDQNEG--NEVQDNDQNEDVQPIEQD 303
+ S D + D QNE N +++ NE P+EQ+
Sbjct: 243 DDTGSNSVKEQDDKMATDSQNEAEPNNLEEQKDNE-ATPMEQE 284
>ref|XP_004981025.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Setaria
italica]
Length = 282
Score = 81.6 bits (200), Expect = 2e-13
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 10 PTEPNVSQLEQPPKVTPTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNLGKE 189
P + ++++ P V PT EQITAIKAAI N+ TLEE ARLEKAL GQ+P EF +
Sbjct: 184 PDAQDTTEVQGPKVVAPTAEQITAIKAAIANTHTLEEAARLEKALSTGQVPAEFAMPKPD 243
Query: 190 TNASE-DMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
N +E D + D QN+ +E Q+++ PI++D
Sbjct: 244 ANMAEASEEADKMDTDGQNQDSEADGQKQDDESTPIQED 282
>gb|ESW25022.1| hypothetical protein PHAVU_003G001500g [Phaseolus vulgaris]
Length = 287
Score = 79.3 bits (194), Expect = 9e-13
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Frame = +1
Query: 19 PNVSQL---EQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMN--- 177
PNVS+ +Q PKV PT EQITAIKAAI+NSQTLEEVARLEKALK GQ+P +
Sbjct: 185 PNVSEAAEEQQVPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALKSGQLPADIQGLND 244
Query: 178 ---LGKETNASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
LG EDM+ D + E N+ Q+ N D +EQD
Sbjct: 245 NIVLGNVDEKPEDMIHDD-RGQADGESNDTQE-QTNTDSTSMEQD 287
>ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Citrus
sinensis]
Length = 286
Score = 79.0 bits (193), Expect = 1e-12
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 VEVPTEPNVSQLEQPPKVTPTLEQITAIKAAIINSQTLEEVARLEKALKLGQIP-----E 165
VEVP + + P V PT EQI AIKAAI+NSQTLEEVARLEK LK GQ+P
Sbjct: 182 VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPADLKIP 241
Query: 166 EFMNLGKETNASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
++ + K+ +++ +V V+ + E N V +N +N+++ +EQD
Sbjct: 242 DYDSGSKDVKENDEKMVPDVENEADVEPNNV-ENQKNDELAAMEQD 286
>gb|ESW10753.1| hypothetical protein PHAVU_009G235000g, partial [Phaseolus
vulgaris]
Length = 191
Score = 78.2 bits (191), Expect = 2e-12
Identities = 53/104 (50%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Frame = +1
Query: 19 PNVSQL---EQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMN--- 177
PNVS+ +Q PKV PT EQITAIKAAI+NSQTLEEVARLEKALK GQ+P +
Sbjct: 88 PNVSEAAEEQQTPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALKSGQLPADIKGLND 147
Query: 178 ---LGKETNASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQ 300
LG EDM+ D + E N+ Q+ N D IEQ
Sbjct: 148 NIVLGNVDEKPEDMIHDD-RGQADGESNDTQE-QTNTDSTSIEQ 189
>ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [Amborella trichopoda]
gi|548847242|gb|ERN06446.1| hypothetical protein
AMTR_s00016p00258810 [Amborella trichopoda]
Length = 300
Score = 78.2 bits (191), Expect = 2e-12
Identities = 47/100 (47%), Positives = 66/100 (66%), Gaps = 5/100 (5%)
Frame = +1
Query: 19 PNVSQL--EQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNLGKE 189
PN+S++ E+PPKV+ PT EQI AIKAAI+NSQTLEEVARLEKALK GQ+P + K
Sbjct: 185 PNISEVPKEEPPKVSGPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADL----KI 240
Query: 190 TNASEDMVVDTVKADD--QNEGNEVQDNDQNEDVQPIEQD 303
+ + + + V++DD EG E ++ +D ++ D
Sbjct: 241 PDVDKATIAEHVESDDPMDTEGQEKVNDVPKDDADQLQTD 280
>dbj|BAJ86838.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514902|dbj|BAJ99812.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 284
Score = 78.2 bits (191), Expect = 2e-12
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 4/93 (4%)
Frame = +1
Query: 37 EQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNLGKETN---ASE 204
+Q PKV PT QITAIKAAI+NSQTL+EV RLEKAL GQ+P EF +TN ASE
Sbjct: 192 DQGPKVVAPTAAQITAIKAAIVNSQTLDEVTRLEKALSTGQVPAEFALPKPDTNMAEASE 251
Query: 205 DMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
+ + ++ D Q + V + Q ++ PI++D
Sbjct: 252 EAEAEKMETDGQGPEDGVVEQKQADESTPIQED 284
>ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525808|gb|ESR37114.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 286
Score = 77.4 bits (189), Expect = 3e-12
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 VEVPTEPNVSQLEQPPKVTPTLEQITAIKAAIINSQTLEEVARLEKALKLGQIP-----E 165
VEVP + + P V PT EQI AIKAAI+NSQTLEEVARLE+ LK GQ+P
Sbjct: 182 VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLKIP 241
Query: 166 EFMNLGKETNASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
++ + K+ +++ +V V+ + E N V +N +N+++ +EQD
Sbjct: 242 DYDSGSKDVKENDEKMVPDVENEADVEPNNV-ENQKNDELAAMEQD 286
>ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525807|gb|ESR37113.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 282
Score = 77.4 bits (189), Expect = 3e-12
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 VEVPTEPNVSQLEQPPKVTPTLEQITAIKAAIINSQTLEEVARLEKALKLGQIP-----E 165
VEVP + + P V PT EQI AIKAAI+NSQTLEEVARLE+ LK GQ+P
Sbjct: 178 VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLKIP 237
Query: 166 EFMNLGKETNASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
++ + K+ +++ +V V+ + E N V +N +N+++ +EQD
Sbjct: 238 DYDSGSKDVKENDEKMVPDVENEADVEPNNV-ENQKNDELAAMEQD 282
>ref|XP_006423872.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525806|gb|ESR37112.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 250
Score = 77.4 bits (189), Expect = 3e-12
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 VEVPTEPNVSQLEQPPKVTPTLEQITAIKAAIINSQTLEEVARLEKALKLGQIP-----E 165
VEVP + + P V PT EQI AIKAAI+NSQTLEEVARLE+ LK GQ+P
Sbjct: 146 VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLKIP 205
Query: 166 EFMNLGKETNASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
++ + K+ +++ +V V+ + E N V +N +N+++ +EQD
Sbjct: 206 DYDSGSKDVKENDEKMVPDVENEADVEPNNV-ENQKNDELAAMEQD 250
>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
gi|296085571|emb|CBI29303.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 77.4 bits (189), Expect = 3e-12
Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Frame = +1
Query: 4 EVPTEPNVSQLEQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNL 180
E+P ++ +Q PKV P+ E++ AIKAAI+NSQTLEEVARLEKALK GQ+P + +L
Sbjct: 183 EMPNALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLEKALKSGQLPADLKSL 242
Query: 181 GKET-----NASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
+ T N +D +V + ++E V++ +N+DV P+EQ+
Sbjct: 243 VENTRADVVNEKDDKMVSSNPNTSRDEPKTVEE-QKNDDVAPMEQE 287
>ref|NP_001242503.1| uncharacterized protein LOC100779162 [Glycine max]
gi|255647036|gb|ACU23986.1| unknown [Glycine max]
Length = 276
Score = 76.3 bits (186), Expect = 8e-12
Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Frame = +1
Query: 19 PNVSQL----EQPPKVTPTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMNLGK 186
PNVS++ + P V PT EQI AIKAAI+N QTLEEVARLEKALK GQ+P + + L
Sbjct: 181 PNVSEVIEEQQMPKVVAPTPEQIIAIKAAIVNFQTLEEVARLEKALKSGQLPADLL-LDN 239
Query: 187 ETNASEDMVVDTVKADDQNEGNEVQDNDQNEDVQPIEQD 303
EDM+ D + E N+ Q+ +N D +EQD
Sbjct: 240 VDEKHEDMIHDD-RGQADGESNDTQE-QRNTDSASMEQD 276
>ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1
[Cicer arietinum]
Length = 280
Score = 75.9 bits (185), Expect = 1e-11
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 VEVPTEPNVSQLEQPPKVT-PTLEQITAIKAAIINSQTLEEVARLEKALKLGQIPEEFMN 177
VE P + +Q PKV+ PT EQI AIKAAI+NSQTLEEVARLEKALK GQ+P + +
Sbjct: 182 VETPEVSESTDEQQTPKVSAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLKS 241
Query: 178 LGKETNASEDMVVDTVKADDQN----EGNEVQDNDQNEDVQPIEQD 303
L ++D+++D V ++ E N+ Q+ +N D +EQD
Sbjct: 242 L------TDDIMLDKVDEKHEDVVHAESNDTQE-PKNTDGTQMEQD 280