BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00015766
         (3330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   634   e-178
gb|ABA93957.1| NLI interacting factor-like phosphatase family pr...   607   e-170
ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal doma...   571   e-160
gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indi...   555   e-155
ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [S...   551   e-154
gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japo...   548   e-153
gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-l...   536   e-149
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l...   525   e-146
gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Ze...   511   e-141
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l...   509   e-141
ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal doma...   489   e-135
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   488   e-135
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   474   e-130
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   467   e-128
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              464   e-128
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   464   e-127
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...   464   e-127
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...   464   e-127
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric...   462   e-127
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   457   e-125

>ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3-like [Oryza brachyantha]
          Length = 1267

 Score =  634 bits (1634), Expect = e-178
 Identities = 450/1092 (41%), Positives = 584/1092 (53%), Gaps = 94/1092 (8%)
 Frame = -2

Query: 2996 EEKPLDLMARERPRG---GRALDGETSDVDSSESLEEISAEDFKQEGRAG---------- 2856
            EE+ + LMARERPR    G    GE SD DSS SLEEISA+DFK+E   G          
Sbjct: 10   EERLVVLMARERPRSAVXGGGGGGEGSDGDSSGSLEEISADDFKKESSGGGGGAGAGAGT 69

Query: 2855 --------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKG 2700
                    RSRVWMGY M ++Y P+ ++FAWAQAVQNKPL     P +A D  +      
Sbjct: 70   GGGVAAAQRSRVWMGYSMPRSYAPAFHSFAWAQAVQNKPL----VPRAAADEDEVEHVVD 125

Query: 2699 KPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEK 2520
               EE  +  +E+                               ET  L SD+PE +PE 
Sbjct: 126  TSDEEKEEGEIEEGEAVQSSESPPRAQP----------------ETIVLDSDVPE-KPES 168

Query: 2519 KESDGEEL-----QDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMF 2355
               DG  +     ++  +FD+R+  ILEEL+TI++EEAE SFE  C RLR SFE+LKP+F
Sbjct: 169  AAMDGVTIPAGAEEEDMDFDQRVGSILEELETISIEEAEKSFEGACTRLRTSFENLKPLF 228

Query: 2354 TGIESSDTXXXXXVQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTL 2175
                S        VQQA +AI T  +  NS  M K++Q K +LL+LL HIKN+YS + T 
Sbjct: 229  PETGSPMPMLDTLVQQAFIAIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSYMLTP 288

Query: 2174 EQVKEIDTLVNSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALD--LP------ 2019
            +Q  E+D+ V  LVFED K    D  N P  +  G+N    A    + L   LP      
Sbjct: 289  DQRNELDSRVRQLVFEDGK----DTANCPNATC-GTNTSNVAATSGQVLSERLPFESGAG 343

Query: 2018 ---------KLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMV 1866
                     K+ +P  SKNR+  SPLLDLHADY+E+SLPSPTR++ P F +PKPIG G  
Sbjct: 344  NTFSGTSMLKVEIP--SKNRM-ISPLLDLHADYDENSLPSPTRDSTPPFPVPKPIGFGTF 400

Query: 1865 LPVSSQP-ITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQ 1689
            L    +P I  +        +P + DALKAVSSYQ K+G  S  ++D LPSPTPS DG +
Sbjct: 401  LMAPDRPSIMERVEPVKNSSYPSLNDALKAVSSYQQKYGQKSTFASDDLPSPTPSGDGDK 460

Query: 1688 -GXXXXXXXXXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHP--VEQL-NPMS 1521
             G                  +      QM  SR S   ++S       P   +Q+ NP+S
Sbjct: 461  SGDKGGDIFGEVSSFPASNKIVLPVVNQMPPSRPSTVSSSSDSFAGGPPGYAKQIENPVS 520

Query: 1520 --KPALKPALKRRDPRLKFVNNEVKSISDEGR---VTEPDLLKSDP--VGVATNSKKHKT 1362
                 LK   K RDPRL+F+N +   ++D  R     EP+  K     VGV  NS+KHKT
Sbjct: 521  GSNHMLKATAKSRDPRLRFLNRDAGVVADANRRLNFAEPNPSKDRTMGVGVPINSRKHKT 580

Query: 1361 -DESVARDHMMKKQRHKLTTSREMETASG-SGWS-EAKNVIPQPSFKIQVNENFQVDVRK 1191
             DE +  ++M+K+ R      R++ T +G  GW+ +  NV    S   Q N+N ++    
Sbjct: 581  VDEPLVDENMLKRSRGGNGNPRDVLTPAGRGGWAKDGVNVSSYSSDGFQPNQNTRLGNST 640

Query: 1190 SGTAAAVPDKKPIFD-NNFDELSGLR----------SIPKSNPTPTISLPSLLK--AVNP 1050
            +G+     D   + + NN    SG+           S P+++  P++SLP++LK  AVNP
Sbjct: 641  TGSHNVRTDSTLVSNTNNMTNSSGINTGVVQAPQTNSSPQTSSAPSVSLPAMLKDIAVNP 700

Query: 1049 TILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQ 873
            T+L+Q  QMEQQ+++A E  +K   S   ++N  +   LP + AS      K+ E+    
Sbjct: 701  TMLMQWIQMEQQKMSATEPLQKVTASVGMTSNETAGMVLPLSCAS------KTTEAAPVP 754

Query: 872  PGISLIPSQMASSSTQPDVARIRMKPRDPRRILHDSMVQKNDGVV---YQQSKIDAAA-S 705
               S +P Q A+  +Q D   IRMKPRDPRRILH ++ QKND V     +Q+KI+  A  
Sbjct: 755  SVRSQVPMQTAAVHSQNDAGVIRMKPRDPRRILHSNIAQKNDTVPPVGVEQAKINGTALP 814

Query: 704  DPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXPCNNQPVAS--------------Q 567
            D Q S   L    Q  + L                   N  PV++              Q
Sbjct: 815  DSQGSKDHLLNHEQQAEQLQTSALPSQPVTPSARQVTMNANPVSNSQLAATALMPHGSTQ 874

Query: 566  ADQVIVEAASGELN--DSETTSLLVSEVG--SEKGTRQSANPWGDVDHLFDGYNDEQKAT 399
                 V  A   L    +ET    V+  G  +       A+PWGDVDHL DGY+D+QKA 
Sbjct: 875  QTSSSVNKADPRLTAGQNETNDDAVTSTGPLTAPDAVLPASPWGDVDHLLDGYDDQQKAL 934

Query: 398  IQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQ 219
            IQKER+RRI EQ KMFAA+K           LNSAKF EV+  HE+ILR+KEEQD+E + 
Sbjct: 935  IQKERARRIMEQQKMFAAQKLCLVLDLDHTLLNSAKFAEVEPIHEEILRKKEEQDRERAD 994

Query: 218  RHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGR 39
            RHLF F HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNK+YATEMA+VLDPTGTLFAGR
Sbjct: 995  RHLFCFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKIYATEMARVLDPTGTLFAGR 1054

Query: 38   VISKGDDADTFD 3
            VIS+GDD DT D
Sbjct: 1055 VISRGDDGDTLD 1066


>gb|ABA93957.1| NLI interacting factor-like phosphatase family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1272

 Score =  607 bits (1564), Expect = e-170
 Identities = 429/1097 (39%), Positives = 570/1097 (51%), Gaps = 99/1097 (9%)
 Frame = -2

Query: 2996 EEKPLDLMARERPR----------------GGRALDGETSDVDSSESLEEISAEDFKQEG 2865
            EE+ + LMARERPR                GG    GE SD DSS SLEEISA+DFK+E 
Sbjct: 10   EERLVVLMARERPRSAVVAPGGDLVTAGGGGGGGGGGEGSDGDSSGSLEEISADDFKKES 69

Query: 2864 RAG-----------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTD 2718
             A            RSRVWMGY + ++Y P+ ++FAWAQAVQNKPL       +  D  +
Sbjct: 70   SAAGGAAAAAAAQQRSRVWMGYNIPRSYAPAFHSFAWAQAVQNKPLVPRAADAADEDEVE 129

Query: 2717 NVDAKGKPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIP 2538
            +V      ++E  ++   ++ Q                            ET  L SD P
Sbjct: 130  HVVDTSDEEKEEGEIEEGEAVQTTTTSSSSPPCAQPP-------------ETIDLDSDAP 176

Query: 2537 ENEPEK-------KESDGEELQDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKS 2379
            E                G E +++ +FD+R+  ILEEL+ +++EEAE SFE  C RLR  
Sbjct: 177  EKSESMVAMYGGGAAPAGAEEEEV-DFDQRVGSILEELEMVSIEEAEKSFEGACTRLRTC 235

Query: 2378 FEDLKPMFTGIESSDTXXXXXVQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKN 2199
            FE+LKP+F    S        VQQA + I T  +  NS  M K++Q K +LL+LL HIKN
Sbjct: 236  FENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKREQTKNMLLKLLFHIKN 295

Query: 2198 QYSVLFTLEQVKEIDTLVNSLVFEDNKKEKADLTNGP------VVSLHGSNVLEKACLVP 2037
            +YS + T +Q  E+D+ V  LVFED K    D  NGP        +  G  + E+     
Sbjct: 296  RYSDMLTPDQRDELDSRVRQLVFEDGK----DNANGPNATSTNAAAPSGQVLSERLPFES 351

Query: 2036 EALD-LPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLP 1860
             A +   K+ +P  +KNR+  SPLLDLHADY+E+SLPSPTR++ P F +PKPIG G +  
Sbjct: 352  GAGNSFSKVEIP--AKNRM-VSPLLDLHADYDENSLPSPTRDSKPPFDVPKPIGYGALPM 408

Query: 1859 VSSQPIT------AKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSED 1698
               +P        AKN       +    DALKAV  YQ K G  S  ++D LPSPTPS D
Sbjct: 409  APDRPSVLERVEPAKNSS-----YQSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGD 463

Query: 1697 GGQGXXXXXXXXXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHP-----VEQL 1533
            G +             S +     A      + SR S   +NS       P     +E  
Sbjct: 464  GDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRPSTVSSNSDSFAGGPPGYAKQIENS 523

Query: 1532 NPMSKPALKPALKRRDPRLKFVNNEVKSISDEGR---VTEPDLLKSDPVG--VATNSKKH 1368
               S   LK   K RDPRLKF+N +   ++D  R     EP+  K   +G  V+ NS+K+
Sbjct: 524  VSGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGGVSINSRKN 583

Query: 1367 KT-DESVARDHMMKKQRHKLTTSREMETASGSGWS-EAKNVIPQPSFKIQVNENFQVDVR 1194
            K  DE +  ++ +K+ R  +   R+M+     GW+ +  N+    S   Q N+N ++   
Sbjct: 584  KAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAKDGGNISSYSSDGFQPNQNTRLGNN 643

Query: 1193 KSG-----TAAAVPDKKPIFDNNFDELSGL------RSIPKSNPTPTISLPSLLK--AVN 1053
             +G     T + +        NN     G+       S P+++  P +SLP++LK  AVN
Sbjct: 644  TTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPAMLKDIAVN 703

Query: 1052 PTILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLN 876
            PT+L+Q  QMEQQ+++A E Q+K   S   ++NV      PG    + + P  ++ + + 
Sbjct: 704  PTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT-----PGMVLPLGNAPKTTEVAAV- 757

Query: 875  QPGIS-LIPSQMASSSTQPDVARIRMKPRDPRRILHDSMVQKNDGV----VYQQSKIDAA 711
             P +   +P Q A   +Q D   IRMKPRDPRRILH ++VQKND V    V Q      A
Sbjct: 758  -PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTA 816

Query: 710  ASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQADQVIVEAASGE 531
              D QSS   L    Q  + L  +                N  PV++   Q+   A    
Sbjct: 817  PPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPVSNS--QLAATALMPP 874

Query: 530  LNDSETTSLLVSEVGSEKGTRQS---------------------ANPWGDVDHLFDGYND 414
              +++ TS  V++        Q+                     A+P+GDVDHL DGY+D
Sbjct: 875  HGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDD 934

Query: 413  EQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQD 234
            +QKA IQKER+RRI EQ+KMFAARK           LNSAKFIEVD  H +ILR+KEEQD
Sbjct: 935  QQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQD 994

Query: 233  KEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGT 54
            +E ++RHLF F HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNK+YATEMAKVLDPTGT
Sbjct: 995  RERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGT 1054

Query: 53   LFAGRVISKGDDADTFD 3
            LFAGRVIS+GDD D FD
Sbjct: 1055 LFAGRVISRGDDGDPFD 1071


>ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Brachypodium distachyon]
          Length = 1259

 Score =  571 bits (1471), Expect = e-160
 Identities = 404/1091 (37%), Positives = 563/1091 (51%), Gaps = 93/1091 (8%)
 Frame = -2

Query: 2996 EEKPLDLMARERPR------GGRALD----GETSDVDSSESLEEISAEDFKQEGRAG--- 2856
            EE+ + LM RERPR      GG  +     GETSD DSSESLEEI+A DF++E   G   
Sbjct: 10   EERLVVLMTRERPRSAVLAPGGDLVSANGGGETSDEDSSESLEEITAADFQKESSGGAAA 69

Query: 2855 ---------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAK 2703
                     RSRVWMGY MS++Y P+ ++FAWAQAVQNKP    L P  A D  +     
Sbjct: 70   GTAASAAAQRSRVWMGYTMSRSYAPAFHSFAWAQAVQNKP----LVPPPAADEDEVEHIV 125

Query: 2702 GKPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEP- 2526
                EE  +  +E+                               ET  L SD+PE    
Sbjct: 126  DTSDEEKEEGEIEEGE----------------AVDTSFPSPHAQPETIDLDSDVPEKSES 169

Query: 2525 ---EKKESDGEELQDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMF 2355
               E   +    +++  +FD+R+  ILEEL+ +++EEAE SFE  C RLR  FE+LKP+F
Sbjct: 170  MAVEGSNTAAVAVEEEVDFDQRVGSILEELEMVSIEEAEKSFEGACERLRTCFENLKPLF 229

Query: 2354 TGIESSDTXXXXXVQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTL 2175
                S        VQQ  + I T  +  NS  M K+ QNK++LL+LL H++N+YS + T 
Sbjct: 230  LESGSPMPMLDALVQQGFVGIDTITTVANSYAMPKRVQNKEMLLKLLFHLRNRYSDMLTP 289

Query: 2174 EQVKEIDTLVNSLVFEDNKKEKADLTNGP--VVSLHGSNVLEKACLVP------------ 2037
            +Q  E+D+ V  L F D ++     T+GP    S + +NV+     VP            
Sbjct: 290  DQRVELDSRVRQLAFVDGEEN----TDGPNASCSTNSTNVVVPTGQVPSERLPFESGATN 345

Query: 2036 --EALDLPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVL 1863
                  LP   L T++KNR+  SPLLDLHAD++E+SLPSPTR+N P+FS+PKPIG G   
Sbjct: 346  PFSGSSLP--WLETQTKNRM-VSPLLDLHADHDENSLPSPTRDNAPQFSVPKPIGFGAFP 402

Query: 1862 PVSSQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQG- 1686
                + +T +       L+P V D+L  VSSY+ K+   S  + D LPSPTPS DG +  
Sbjct: 403  MGPDRSLTERAEPSKKNLYPSVNDSLD-VSSYKQKYSQKSNFANDDLPSPTPSGDGDKSE 461

Query: 1685 --XXXXXXXXXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSIS---NQSHPVEQLNPMS 1521
                          S N  A+ + +Q    +  S+   +N S S     +  +EQ     
Sbjct: 462  DKDGDMFGEISSFSSSNKTALPSVSQIPASRP-STVSSSNGSFSGPPGYAKKIEQSVSGP 520

Query: 1520 KPALKPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHK-TDESVAR 1344
              ALKP+ K RDPRL+++N +    +      EP+      +G      KHK   + +  
Sbjct: 521  NLALKPSAKSRDPRLRYLNRDPGDANRCMNFAEPNASLGGTLG------KHKAVGQPLMD 574

Query: 1343 DHMMKKQRHKLTTSREMETASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPD 1164
            ++M+K+ R  +   R+++   G    +  N+   PS ++Q N+N ++D + +G      D
Sbjct: 575  ENMVKRARGSIGNPRDLQVPPG---RDGSNISFYPSDRVQSNQNTRLDTKTTGNPNLRAD 631

Query: 1163 KK------PIFDNNFDELSGLR-----SIPKSNPTPTISLPSLLK--AVNPTILLQLHQM 1023
             +       I +++      L      S+P+++  P++SLP++LK  AVNPT+L+   QM
Sbjct: 632  SQLLSNVSSITNSSVTSTKTLNAGQPDSVPQTSAAPSVSLPAVLKDIAVNPTVLMHWIQM 691

Query: 1022 EQQRIAAENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLIPSQM 843
            EQQ+ +A   ++   +    ++ +  N+  G      S  LK+ ++          P+Q 
Sbjct: 692  EQQKRSASEPQQTVNTLGGISSGMINNDTAGMVIPPGSA-LKTADAAQIPSIRPQCPTQT 750

Query: 842  ASSSTQPDVARIRMKPRDPRRILHDSMVQKND----------GVVY---QQSKIDAAASD 702
            A   +Q D   IRMKPRDPRRILH++   KND          G+V    Q SK +    +
Sbjct: 751  APVISQTDAGVIRMKPRDPRRILHNNTSPKNDTTNSEQARSNGIVLPVSQDSKDNMINRE 810

Query: 701  PQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQADQVIVEAASGEL-- 528
             Q+  ++  A      +L+N+                N+Q  AS    +  +  SG +  
Sbjct: 811  QQAEQLQTGALPSQPVSLSNI-ARPSTMSASMVDPVSNSQLAASSL--MAPQQTSGSINR 867

Query: 527  ---------NDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRR 375
                     ND    +   +   +  G    AN WGD+D L  GY+D+QKA IQKER+RR
Sbjct: 868  ADPRLAPGQNDPNADAATNASPATTLGAAPPANQWGDLDDLLSGYDDQQKALIQKERARR 927

Query: 374  IAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQH 195
            I EQ KMF+ARK           LNSAKF+EVD  HE+ILR+KEEQD+E  +RHLFR  H
Sbjct: 928  IMEQQKMFSARKLCLVLDLDHTLLNSAKFLEVDPIHEEILRKKEEQDRERPERHLFRLHH 987

Query: 194  MGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVI------ 33
            M MWTKLRPGIWNFLEKAS LYELHLYTMGNKLYATEMAKVLDPTG LF GRVI      
Sbjct: 988  MSMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFEGRVISRGGDG 1047

Query: 32   -SKGDDADTFD 3
             S+G D D+FD
Sbjct: 1048 TSRGGDGDSFD 1058


>gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indica Group]
          Length = 1255

 Score =  555 bits (1430), Expect = e-155
 Identities = 413/1118 (36%), Positives = 542/1118 (48%), Gaps = 120/1118 (10%)
 Frame = -2

Query: 2996 EEKPLDLMARERPR----------------GGRALDGETSDVDSSESLEEISAEDFKQEG 2865
            EE+ + LMARERPR                GG    GE SD DSS SLEEISA+DFK+E 
Sbjct: 10   EERLVVLMARERPRSAVVAPGGDLVTAGGGGGGGGGGEGSDGDSSGSLEEISADDFKKES 69

Query: 2864 RAG--------------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGD 2727
             A               RSRVWMGY + ++Y P+ ++FAWAQAVQNKPL       +  D
Sbjct: 70   SAAGGVAAAAAAAAAQQRSRVWMGYNIPRSYAPAFHSFAWAQAVQNKPLVPRAADAADED 129

Query: 2726 LTDNVDAKGKPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSS 2547
              ++V      ++E  ++   ++ Q                            ET  L S
Sbjct: 130  EVEHVVDTSDEEKEEGEIEEGEAVQTTTTSSSSPPCAQPP-------------ETIDLDS 176

Query: 2546 DIPENEPEKKESDG-------EELQDISEFDKRISLILEELDTITVEEAET--------- 2415
            D PE        DG        E +++ +FD+R+  ILEEL+ +++EEAE          
Sbjct: 177  DAPEKSESMVAMDGGGAAPAGAEEEEV-DFDQRVGSILEELEMVSIEEAEKYGLMILLYG 235

Query: 2414 ------------------------SFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQ 2307
                                    SFE  C RLR  FE+LKP+F    S        VQQ
Sbjct: 236  KVHVLDVFWCMIQLLRDPILIFCRSFEGACTRLRTCFENLKPLFPESGSPMPMLDALVQQ 295

Query: 2306 AVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVFE 2127
            A + I T  +  NS  M K++Q K +LL+LL HIKN+YS + T +Q  E+D+ V  LVFE
Sbjct: 296  AFVGIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFE 355

Query: 2126 DNKKEKADLTNGP------VVSLHGSNVLEKACLVPEALD-LPKLVLPTRSKNRVDFSPL 1968
            D K    D  NGP        +  G  + E+      A +   K+ +P  +KNR+  SPL
Sbjct: 356  DGK----DNANGPNATSTNAAAPSGQVLSERLPFESGAGNSFSKVEIP--AKNRM-VSPL 408

Query: 1967 LDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPIT------AKNGGEDVMLH 1806
            LDLHADY+E+SLPSPTR++ P F +PKPIG G +     +P        AKN       +
Sbjct: 409  LDLHADYDENSLPSPTRDSAPPFDVPKPIGYGALPMAPDRPSVLERVEPAKNSS-----Y 463

Query: 1805 PYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXSCNPRAVH 1626
                DALKAV  YQ K G  S  ++D LPSPTPS DG +             S +     
Sbjct: 464  QSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKI 523

Query: 1625 AATQFQMVKSRSSAPCTNSSISNQSHP-----VEQLNPMSKPALKPALKRRDPRLKFVNN 1461
                   + SR S   +NS       P     +E     S   LK   K RDPRLKF+N 
Sbjct: 524  VLPIVNQMPSRPSTVSSNSDSFAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLNR 583

Query: 1460 EVKSISDEGR---VTEPDLLKSDPVGVATNSKKHKTDESVARDHMMKKQRHKLTTSREME 1290
            +   ++D  R     EP+ LK  P  V   S                        +    
Sbjct: 584  DTGGVADANRRVNFAEPNPLKIGPWVVEYQS-----------------------IAPNQN 620

Query: 1289 TASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRSI 1110
            T  G+  +   N+    +    +N         SGT+  +            +     S 
Sbjct: 621  TRLGNNTTGNHNIRTDSTLASNLNNT----TNNSGTSPGIV-----------QAPQTNSA 665

Query: 1109 PKSNPTPTISLPSLLK--AVNPTILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNE 939
            P+++  P +SLP++LK  AVNPT+L+Q  +ME  +++A E Q+K   S   ++NV     
Sbjct: 666  PQTSSAPAVSLPAMLKDIAVNPTMLMQWIRMEHHKMSASEPQQKVTASVGMTSNVT---- 721

Query: 938  LPGTAASINSTPLKSKESGLNQPGIS-LIPSQMASSSTQPDVARIRMKPRDPRRILHDSM 762
             PG    + + P  ++ + +  P +   +P Q A   +Q D   IRMKPRDPRRILH ++
Sbjct: 722  -PGMVLPLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNI 778

Query: 761  VQKNDGV----VYQQSKIDAAASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXP 594
            VQKND V    V Q      A  D QSS   L    Q  + L  +               
Sbjct: 779  VQKNDTVPPVGVEQAKSNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVT 838

Query: 593  CNNQPVASQADQVIVEAASGELNDSETTSLLVSEVGSEKGTRQS---------------- 462
             N  PV++   Q+   A      +++ TS  V++        Q+                
Sbjct: 839  MNANPVSNS--QLAATALMPPHGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAP 896

Query: 461  -----ANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNS 297
                 A+P+GDVDHL DGY+D+QKA IQKER+RRI EQ+KMFAARK           LNS
Sbjct: 897  DAVPPASPYGDVDHLLDGYDDQQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNS 956

Query: 296  AKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHL 117
            AKFIEVD  H +ILR+KEEQD+E ++RHLF F HMGMWTKLRPGIWNFLEKAS LYELHL
Sbjct: 957  AKFIEVDHIHGEILRKKEEQDRERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHL 1016

Query: 116  YTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            YTMGNK+YATEMAKVLDPTGTLFAGRVIS+GDD D FD
Sbjct: 1017 YTMGNKVYATEMAKVLDPTGTLFAGRVISRGDDGDPFD 1054


>ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [Sorghum bicolor]
            gi|241935397|gb|EES08542.1| hypothetical protein
            SORBIDRAFT_05g019010 [Sorghum bicolor]
          Length = 1197

 Score =  551 bits (1421), Expect = e-154
 Identities = 391/1064 (36%), Positives = 559/1064 (52%), Gaps = 73/1064 (6%)
 Frame = -2

Query: 2975 MARERPR------GGRALD----GETSDVDSSESLEEISAEDFKQEGRAG---------- 2856
            MARERPR      GG  +     GE SD DS+ S+EEISA+DF+++  +           
Sbjct: 1    MARERPRSTVVAAGGDLVTAPGGGEGSDGDSAGSIEEISADDFRKDSSSALGGPAAAAAA 60

Query: 2855 --RSRVWMGYP----MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDN-VDAKGK 2697
              RSR W+G P    M++N+G +  +FAW+QAV+NKPLGL   P S  D  ++ VDA   
Sbjct: 61   GQRSRSWVGPPAVGYMARNFGHAFNSFAWSQAVRNKPLGLQPPPASDEDEVEHAVDASDG 120

Query: 2696 PQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKK 2517
             +EE       +  +                          ++++  L+  +P +  E++
Sbjct: 121  EKEEG------EIEEGEAVEAEASPARAQPETIDLDADADALEKSESLAGAVPASAAEEE 174

Query: 2516 ESDGEELQDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESS 2337
            E +          D+R+  ILEEL+ +++EEAE SFE  C RL   FE+LKP+F  +E+ 
Sbjct: 175  EVN---------LDQRVGSILEELEMVSIEEAEKSFEGACGRLHTCFENLKPLFQELENG 225

Query: 2336 D--TXXXXXVQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVK 2163
                     +QQA + I T  +   S  + + +QNK  LL+ L HIKN+YS + T EQ  
Sbjct: 226  SPMAILEPLMQQAFIGIDTLTTVAISYNLPRSEQNKTTLLKSLFHIKNRYSDMLTPEQRD 285

Query: 2162 EIDTLVNSLVF--EDNKKEKAD---------LTNGPVVSLHGSNVLEKACLVPEALDLPK 2016
            E+D+ V  LVF  +DN  + +          L     VS  G    E     P +  LP+
Sbjct: 286  ELDSRVRKLVFGEKDNVSDPSTSSGTNAINVLAPSGQVSSSGGLPFESGAANPFS-SLPR 344

Query: 2015 LVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITA 1836
            L +P +       SPLLDLHADY+E+SLPSPTR+N P F +PKPIG G   P+  + ++ 
Sbjct: 345  LEVPAKR-----ISPLLDLHADYDENSLPSPTRDNAPPFPVPKPIGFG-AFPMVPEKLSF 398

Query: 1835 KNGGEDVM--LHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXX 1662
                E     L+P + D LKAVSSYQ K+G  S+  +D LPSPTPS D G+         
Sbjct: 399  PERVEPAKNSLYPSLNDPLKAVSSYQQKYGQKSVFPSDDLPSPTPSGDEGKSADKGGDIF 458

Query: 1661 XXXXSCN-PRAVHAATQFQMVKSRSSAPCTNSSISNQSHP------VEQLNPMSKP--AL 1509
                S   P+++   +  QM  S+ S   ++S IS  S P      +EQ  P++ P  A+
Sbjct: 459  SEVSSFPVPKSIALPSTSQMPASQPST-VSSSGISYASGPPGFAKQIEQ--PVAGPNHAI 515

Query: 1508 KPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVAT-NSKKHKT-DESVARDHM 1335
            K A K RDPRL+F+N +    +D  R      LK   +G A+  ++KHK  D+    +++
Sbjct: 516  KAASKSRDPRLRFLNRDSAGATDVNRRANFSELKDGNLGGASVGNRKHKAIDDPQVDENV 575

Query: 1334 MKKQRHKLTTSREMETASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKP 1155
            +K+ R      R+++                       N N  +++R    ++ +     
Sbjct: 576  LKRFRGGTANPRDLQPTG--------------------NPNQLMNIRAPTNSSGI----- 610

Query: 1154 IFDNNFDELSGLRSI-PKSNPTPTISLPSLLK---AVNPTILLQLHQMEQQRIAAENQKK 987
                N   L   ++  P  +  P + +PS+L    AVNPT+L+ L QME Q+ +A   + 
Sbjct: 611  ----NMKTLQPPQTTAPHVSAAPAVPVPSMLLKDIAVNPTLLMHLIQMEHQKKSASETQG 666

Query: 986  NAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVARI 807
               S   +  +  +   PG A        K+ E+         +P+Q  S ++Q D   +
Sbjct: 667  GMSSGMSNNGIAGMVFTPGNAP-------KTTEAAQVPSVRPQVPAQTPSLNSQNDGGIL 719

Query: 806  RMKPRDPRRILHDSMVQKNDGVVYQQSKI------DAAASDPQSSLV--------RLAAP 669
            RMKPRDPRRILH+++ QK+D +V +Q K       D+  +  Q+S +         +A P
Sbjct: 720  RMKPRDPRRILHNNVAQKSDAMVLEQVKTNGITQPDSQGTKDQTSSMPSQPTLPSSVARP 779

Query: 668  LQLTKNLANVLXXXXXXXXXXXXXPCNNQPVAS--QADQVIVEAASGELNDSETTSLLVS 495
               TK++  V                  Q + S  + D  +    +G+  D+ TT    +
Sbjct: 780  FTNTKHVDPVSNSQLAATAIMAP---TQQALGSINKVDPRLAVEQNGQNADATTTDASAT 836

Query: 494  EVGSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXX 315
            E+ +     Q  +PWG++DHL DGY+D+QKA IQKER+RRI EQ+KMF+ARK        
Sbjct: 837  ELEAT----QPVSPWGNLDHLLDGYDDKQKALIQKERARRITEQHKMFSARKLCLVLDLD 892

Query: 314  XXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASN 135
               LNSAKFIEV+  HE++LR+KEEQD+ + +RHL+RF HM MWTKLRPGIWNFLEKASN
Sbjct: 893  HTLLNSAKFIEVEPIHEEMLRKKEEQDRTLPERHLYRFHHMNMWTKLRPGIWNFLEKASN 952

Query: 134  LYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            L+ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVIS+GDD D FD
Sbjct: 953  LFELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDPFD 996


>gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japonica Group]
          Length = 1267

 Score =  548 bits (1413), Expect = e-153
 Identities = 413/1112 (37%), Positives = 545/1112 (49%), Gaps = 121/1112 (10%)
 Frame = -2

Query: 2975 MARERPR----------------GGRALDGETSDVDSSESLEEISAEDFKQEGRAGRSRV 2844
            MARERPR                GG    GE SD DSS SLEEISA+DFK+E  A  S  
Sbjct: 1    MARERPRSAVVAPGGDLVTAGGGGGGGGGGEGSDGDSSGSLEEISADDFKKESSAAGSAA 60

Query: 2843 WMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVE 2664
                   ++           +AVQNKP+       SA D  D        ++E   V+  
Sbjct: 61   AAAAAQQRS-----------RAVQNKPV-----VPSAADAAD--------EDEVEHVVDT 96

Query: 2663 DSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEK-------KESDG 2505
               +                            ET  L SD PE                G
Sbjct: 97   SDEEKEEGEIEEGEAVQTTTTSSSSPPCAQPPETIDLDSDAPEKSESMVAMYGGGAAPAG 156

Query: 2504 EELQDISEFDKRISLILEELDTITVEEAET------------------------------ 2415
             E +++ +FD+R+  ILEEL+ +++EEAE                               
Sbjct: 157  AEEEEV-DFDQRVGSILEELEMVSIEEAEKYGLMILLYGKVHVLDVFWCMIQLLRDPILM 215

Query: 2414 ---SFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAVMAIQTTYSALNSVTMQKKD 2244
               SFE  C RLR  FE+LKP+F    S        VQQA + I T  +  NS  M K++
Sbjct: 216  FCRSFEGACTRLRTCFENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKRE 275

Query: 2243 QNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVFEDNKKEKADLTNGP------VV 2082
            Q K +LL+LL HIKN+YS + T +Q  E+D+ V  LVFED K    D  NGP        
Sbjct: 276  QTKNMLLKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFEDGK----DNANGPNATSTNAA 331

Query: 2081 SLHGSNVLEKACLVPEALD-LPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLP 1905
            +  G  + E+      A +   K+ +P  +KNR+  SPLLDLHADY+E+SLPSPTR++ P
Sbjct: 332  APSGQVLSERLPFESGAGNSFSKVEIP--AKNRM-VSPLLDLHADYDENSLPSPTRDSKP 388

Query: 1904 KFSIPKPIGLGMVLPVSSQPIT------AKNGGEDVMLHPYVTDALKAVSSYQLKFGSNS 1743
             F +PKPIG G +     +P        AKN       +    DALKAV  YQ K G  S
Sbjct: 389  PFDVPKPIGYGALPMAPDRPSVLERVEPAKNSS-----YQSFNDALKAVCYYQQKHGQKS 443

Query: 1742 ILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSI 1563
              ++D LPSPTPS DG +             S +     A      + SR S   +NS  
Sbjct: 444  NFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRPSTVSSNSDS 503

Query: 1562 SNQSHP-----VEQLNPMSKPALKPALKRRDPRLKFVNNEVKSISDEGR---VTEPDLLK 1407
                 P     +E     S   LK   K RDPRLKF+N +   ++D  R     EP+  K
Sbjct: 504  FAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSK 563

Query: 1406 SDPVG--VATNSKKHKT-DESVARDHMMKKQRHKLTTSREMETASGSGWS-EAKNVIPQP 1239
               +G  V+ NS+K+K  DE +  ++ +K+ R  +   R+M+     GW+ +  N+    
Sbjct: 564  DRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAKDGGNISSYS 623

Query: 1238 SFKIQVNENFQVDVRKSG-----TAAAVPDKKPIFDNNFDELSGL------RSIPKSNPT 1092
            S   Q N+N ++    +G     T + +        NN     G+       S P+++  
Sbjct: 624  SDGFQPNQNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSA 683

Query: 1091 PTISLPSLLK--AVNPTILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNELPGTAA 921
            P +SLP++LK  AVNPT+L+Q  QMEQQ+++A E Q+K   S   ++NV      PG   
Sbjct: 684  PAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT-----PGMVL 738

Query: 920  SINSTPLKSKESGLNQPGIS-LIPSQMASSSTQPDVARIRMKPRDPRRILHDSMVQKNDG 744
             + + P  ++ + +  P +   +P Q A   +Q D   IRMKPRDPRRILH ++VQKND 
Sbjct: 739  PLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDT 796

Query: 743  V----VYQQSKIDAAASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXPCNNQPV 576
            V    V Q      A  D QSS   L    Q  + L  +                N  PV
Sbjct: 797  VPPVGVEQAKSNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPV 856

Query: 575  ASQADQVIVEAASGELNDSETTSLLVSEVGSEKGTRQS---------------------A 459
            ++   Q+   A      +++ TS  V++        Q+                     A
Sbjct: 857  SNS--QLAATALMPPHGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPA 914

Query: 458  NPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEV 279
            +P+GDVDHL DGY+D+QKA IQKER+RRI EQ+KMFAARK           LNSAKFIEV
Sbjct: 915  SPYGDVDHLLDGYDDQQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEV 974

Query: 278  DLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNK 99
            D  H +ILR+KEEQD+E ++RHLF F HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNK
Sbjct: 975  DHIHGEILRKKEEQDRERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 1034

Query: 98   LYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            +YATEMAKVLDPTGTLFAGRVIS+GDD D FD
Sbjct: 1035 VYATEMAKVLDPTGTLFAGRVISRGDDGDPFD 1066


>gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Triticum
            urartu]
          Length = 1119

 Score =  536 bits (1382), Expect = e-149
 Identities = 383/1013 (37%), Positives = 527/1013 (52%), Gaps = 71/1013 (7%)
 Frame = -2

Query: 2828 MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQX 2649
            MS++Y P+ ++FAWAQAVQNKPL     P  A D  +         EE  +  +E+    
Sbjct: 1    MSRSYAPAFHSFAWAQAVQNKPL----VPRPAADEDEVEHLVDTSDEEKEEGEIEEGEAV 56

Query: 2648 XXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPE---KKESDGEELQDISEF 2478
                                       ET  L SD  +       ++     E  D  +F
Sbjct: 57   QSTSPPIKQP-----------------ETIDLDSDAQDKSESVDMEQTRLAVEAADELDF 99

Query: 2477 DKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAVM 2298
            D+R+  ILEEL+ +++EEAE SFEA C RLR  FE LKP+F    S        VQQA +
Sbjct: 100  DQRVGSILEELERLSIEEAEKSFEASCARLRSCFESLKPLFPESGSPMPMLDALVQQAFV 159

Query: 2297 AIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVF---E 2127
             I T  +  NS  M K++QNK +LL+LL HIKN+YS +  L Q  E+D+ V  LVF   E
Sbjct: 160  GIDTITTVANSYAMPKREQNKNMLLKLLFHIKNRYSDMLALNQRDELDSRVRQLVFVDGE 219

Query: 2126 DNKKEKADLTNGPVVSLHGSNVLEK------ACLVPEALDLPKLVLPTRSKNRVDFSPLL 1965
            DN           VV   G    ++      A   P     P   +P  + NR+  SPLL
Sbjct: 220  DNAGSNCSTKTVNVVVPSGQVPSDRLPVESGAANPPRGSSFPSWEIP--ANNRI-VSPLL 276

Query: 1964 DLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAKN-GGEDVMLHPYVTDA 1788
            DLHADY+E+SLPSPTR + P FS+PKPIG G+      +  +A+      + L+P V DA
Sbjct: 277  DLHADYDENSLPSPTRVSAPPFSVPKPIGFGVFPMAPDRYFSAERIDPSKIFLYPCVNDA 336

Query: 1787 LKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXSCNPRAVHAATQFQ 1608
            LK VSSY+ K+G  S  ++D LPSPTPS+DG +             S +     A     
Sbjct: 337  LKDVSSYRQKYGPTSTFASDDLPSPTPSDDGDKSGDKEGDIFGEVSSFSASNKSAPPSGN 396

Query: 1607 MVKSRSSAPCTNSSISNQSHP------VEQLNPMSKPALKPALKRRDPRLKFVNNEVKSI 1446
            ++ +   +   +S+ S    P      +EQ       ALKP+ K RDPRL+F+N +    
Sbjct: 397  LMPASRPSAVISSNDSFAGGPPGYAKQIEQSVSGPSHALKPSAKSRDPRLRFLNRDSGGT 456

Query: 1445 SDEG---RVTEPDLLKSDPVG--VATNSKKHK-TDESVARDHMMKKQRHKLTTSREMETA 1284
            +D      + EP+  K   +G  V+ NS+KHK TD+ +  + ++K+ R    + R++   
Sbjct: 457  ADANIHVNLAEPNASKDGTLGGVVSDNSRKHKATDQPLMDETVLKRARESTGSPRDILVP 516

Query: 1283 SGSGWSEAKNVIPQPSFKIQVNENFQVDVRKS------------GTAAAVPDKKPIFDNN 1140
             G    +  N+      ++Q N++  ++ + +               +++PD        
Sbjct: 517  PGR---DGSNISSYSGDRVQSNKHTGLETKTARNPSIRTSSQLISNVSSIPDSTGTL--- 570

Query: 1139 FDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQLHQME-QQRIAAENQKKNAVSTS 969
              + S   S+P+++  P +SLP++LK  AVNPT+L+   QME Q+R A+E Q  + + +S
Sbjct: 571  --QASQPNSVPQTSAAPIVSLPAVLKDIAVNPTVLMHWIQMEHQKRSASEPQPASGIISS 628

Query: 968  DSANVLSVNEL--PGTAASINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVARIRMKP 795
               N ++   +  PG A       LK+ E            SQ AS ++Q D   IRMK 
Sbjct: 629  GMINNVTAGMVIPPGNA-------LKTAEVAHIPSYRPQATSQTASVNSQNDPGVIRMKA 681

Query: 794  RDPRRILHDSMVQKNDGVVYQQSKIDAAA----SDPQSSLV---RLAAPLQLTK------ 654
            RDPRR+LH++  QKND +   Q+K +  A     D + +L+   +LA  LQ T       
Sbjct: 682  RDPRRVLHNNTSQKNDTLNSDQAKSNGIALPAFQDSKDNLINRQQLAEQLQTTVLPSQPV 741

Query: 653  NLANVLXXXXXXXXXXXXXPCNNQPVAS-----QADQVIVEAASGEL----NDSETTSLL 501
            +L+++                N+Q  AS     Q   V V  A   +    NDS   +  
Sbjct: 742  SLSSIARQSTMSASKVDPVS-NSQLAASSLIAPQESLVSVNRADPRVAAGQNDSNNAA-- 798

Query: 500  VSEVGSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXX 321
                 +  GTR  AN WGD+D L +GY+D+QKA IQKER+RRI EQ+ MF++RK      
Sbjct: 799  ---PATTLGTRPPANQWGDLDDLLNGYDDQQKALIQKERARRIMEQHTMFSSRKLCLVLD 855

Query: 320  XXXXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKA 141
                 LNSAKFIEVD  HE+ILR+KEEQD+E S+RHLFRF HM MWTKLRPGIWNFLEKA
Sbjct: 856  LDHTLLNSAKFIEVDPIHEEILRKKEEQDRERSERHLFRFHHMQMWTKLRPGIWNFLEKA 915

Query: 140  SNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRV-------ISKGDDADTFD 3
            S LYELHLYTMGNKLYATEMAKVLDP+GTLFAGRV       IS+G D DTFD
Sbjct: 916  SKLYELHLYTMGNKLYATEMAKVLDPSGTLFAGRVISRGGDGISRGGDGDTFD 968


>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
            notabilis]
          Length = 1301

 Score =  525 bits (1352), Expect = e-146
 Identities = 404/1122 (36%), Positives = 571/1122 (50%), Gaps = 135/1122 (12%)
 Frame = -2

Query: 2963 RPRGGRAL-DGETSDVDSSESLEEISAEDF-KQEGRA-------------------GRSR 2847
            R   GR + D E  ++  S S+EEIS EDF KQEG                     G SR
Sbjct: 3    RIESGRVVEDVEEGEISDSASVEEISEEDFNKQEGNGTGSGKVMSVSDSNSKESKFGDSR 62

Query: 2846 VWM------GYPMSKNYGPSLYNFAWAQAVQNKPLG-LDLKPMSAGDLTDNVDAKGKPQ- 2691
            VW        YP  + Y   LYN AWAQAVQNKPL  + +  + A D +  V +   P  
Sbjct: 63   VWTMRDLYANYPGFRGYTTGLYNLAWAQAVQNKPLNEIFVMDVDADDSSRVVLSSASPAV 122

Query: 2690 --------------EEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQL 2553
                          E+   V+++DS+                             E  + 
Sbjct: 123  NSGRREGKNGVKEVEKVEKVVIDDSADEMEEG-----------------------ELEEG 159

Query: 2552 SSDIPENEPEKKESDGEELQD------------------ISEFDKRISLILEELDTITVE 2427
              D+ E+EP +K + GEE +D                    E +KR+ LI E L ++ V 
Sbjct: 160  EIDL-ESEPTQKPA-GEEAKDGDLNCEAENVGGLEVDSRRDELEKRVDLIWETLGSVNVV 217

Query: 2426 EAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAVMAIQTTYSALNSVTMQKK 2247
             AE SFE VC RL+++ E L+ + +  E S       +Q ++ AIQ   S   S+++ +K
Sbjct: 218  NAEKSFEEVCSRLQRTLESLRGVLSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQK 277

Query: 2246 DQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLV---------FEDNKKEK----- 2109
            +Q K+ L RL   +KN  + LF+ EQ KEI+ +++SL            D +KE      
Sbjct: 278  EQKKETLSRLFCSVKNCGTPLFSPEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIER 337

Query: 2108 -----ADLTNGPV--VSLHGSNV-LEKACLVP----EALDLPKLVLP--TRSKNRVDFSP 1971
                 ++LTN      S+  ++V L + C+        + LP+L+ P     K R    P
Sbjct: 338  LHEMDSNLTNANAENASIERTSVKLPQDCVASVVHSNPITLPELLRPGTLAFKGRGLLLP 397

Query: 1970 LLDLHADYNEDSLPSPTRENLPKFSIPKPIGL--GMVLPVSSQPITAKNGGEDVMLHPYV 1797
            LLDLH D++ DSLPSPTRE    F + KP+G+  G++ PVS+    A  G E+  LH Y 
Sbjct: 398  LLDLHKDHDADSLPSPTREAPSCFPVYKPLGVADGIIKPVSTTAKVAP-GAEESRLHRYE 456

Query: 1796 TDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXSCNPRAVHAAT 1617
            TDALKAVS+YQ KFG  S L +DRLPSPTPSE+  +             S N R      
Sbjct: 457  TDALKAVSTYQQKFGRGSFLMSDRLPSPTPSEECDEEDDINQEVSSSLTSGNLRTPAIPI 516

Query: 1616 QFQMVKSRS---SAPCTNSSISNQSHPVEQLNPMSKPALKPALKRRDPRLKFVNNEVKSI 1446
                V + S   S+P     I+ ++     +   S   +K + + RDPRL+F N++  ++
Sbjct: 517  LRPSVVTSSVPVSSPTMQGPIAAKN--AAPVGSGSNSTMKASARSRDPRLRFANSDAGAL 574

Query: 1445 SDEGRVTE-----PDLLKSDPVGVATNSKKHKTDESVARDH-MMKKQRHKLTTSR-EMET 1287
                R        P +   DP    T+S+K +  E    D   +K+QRH   +++ +++T
Sbjct: 575  DLNQRPLTAVHNGPKVEPGDP----TSSRKQRIVEEPNLDGPALKRQRHAFVSAKIDVKT 630

Query: 1286 ASG-SGWSEAKNVI-PQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRS 1113
            ASG  GW E      PQ   K Q+ EN + D RKS          PI +N  +   G   
Sbjct: 631  ASGVGGWLEDNGTTGPQIMNKNQLVENAEADPRKSIHLV----NGPIMNNGPN--IGKEQ 684

Query: 1112 IPKSNPTPTISLPSLLK--AVNPTILLQ-LHQMEQQRIAAENQKKNAVSTSDSANVLSVN 942
            +P +  +   +LP++LK  AVNPTI +  L+++ QQ++ A + ++ + S+ ++ +    N
Sbjct: 685  VPVTGTSTPDALPAILKDIAVNPTIFMDILNKLGQQQLLAADAQQKSDSSKNTTHPPGTN 744

Query: 941  ELPGTAASINSTPLKSKESGLNQ-PGISL-IPSQMASSSTQPDVARIRMKPRDPRRILHD 768
             + G A  +N  P  SK SG+ Q P +SL   SQ+A++S Q ++ +IRMKPRDPRR+LH 
Sbjct: 745  SILGAAPLVNVAP--SKASGILQTPAVSLPTTSQVATASMQDELGKIRMKPRDPRRVLHG 802

Query: 767  SMVQKNDGVVYQQSK-------------------IDAAASD----PQSSLVRLAAPLQLT 657
            +M+QK+  + ++Q K                   +    +D    P   +V+     Q T
Sbjct: 803  NMLQKSWSLGHEQFKPIVSSVSCTPGNKDNLNGPVQEGQADKKQVPSQLVVQPDIARQFT 862

Query: 656  KNLANVLXXXXXXXXXXXXXPCN----NQPVASQADQVIVEAASGELNDSETTSLLVSEV 489
            KNL N+                +    +QP+  + D+  V+A      D  + +    E 
Sbjct: 863  KNLRNIADLMSVSQASTSPATVSQNLSSQPLPVKPDRGDVKAVVPNSEDQHSGTNSTPET 922

Query: 488  GSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXX 309
                 +R + N WGDV+HLF+GY+DEQKA IQ+ER+RR+ EQ KMF A K          
Sbjct: 923  TLAVPSR-TPNAWGDVEHLFEGYDDEQKAAIQRERARRLEEQKKMFDAHKLCLVLDLDHT 981

Query: 308  XLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLY 129
             LNSAKF+EVD  H++ILR+KEEQD+E  QRHLFRF HMGMWTKLRPG+WNFLEKAS LY
Sbjct: 982  LLNSAKFVEVDSVHDEILRKKEEQDREKPQRHLFRFPHMGMWTKLRPGVWNFLEKASKLY 1041

Query: 128  ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            ELHLYTMGNKLYATEMAKVLDP GTLF+GRVIS+GDD D FD
Sbjct: 1042 ELHLYTMGNKLYATEMAKVLDPMGTLFSGRVISRGDDGDPFD 1083


>gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Zea mays]
          Length = 1234

 Score =  511 bits (1315), Expect = e-141
 Identities = 387/1108 (34%), Positives = 544/1108 (49%), Gaps = 117/1108 (10%)
 Frame = -2

Query: 2975 MARERPR------GGRALD-----GETSDVDSSESLEEISAEDFKQEGRAG--------- 2856
            MARE+PR      GG  +      GE SD DSS S+EEI+A+DFK++  +          
Sbjct: 1    MAREQPRSAVVAAGGDLVTAAGGGGEGSDRDSSGSIEEITADDFKKDSSSALGGAAAAAG 60

Query: 2855 -RSRVWMGYP----MSKNYGPSLYNFAWAQAVQNKPLGL------DLKPMSAGDLTDNVD 2709
             RSR W+  P    M++N+  +  +FAW+QAV+NKPLGL      D +   A D++D   
Sbjct: 61   PRSRSWVAPPAVGYMARNFRYAFNSFAWSQAVRNKPLGLQPPAPDDDEVEHAVDVSDGEK 120

Query: 2708 AKGKPQE-EAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPEN 2532
             +G+ +E EA + +   +                              ET  L SD PE 
Sbjct: 121  EEGEIEEGEAVEALASPAPAQP--------------------------ETIDLDSDAPEK 154

Query: 2531 EPEKKESDGE---------ELQDISEFDKRISLILEELDTITVEEAET------------ 2415
              E    DG          E ++++  D+R+  ILEEL+ +++EEAE             
Sbjct: 155  S-ESVAIDGSASVVPVPAAEEEEVN-LDQRVGSILEELEMVSIEEAEKYMGICFMFFLEQ 212

Query: 2414 -----SFEAVCLRLRKSFEDLKPMFTGIESSD--TXXXXXVQQAVMAIQTTYSALNSVTM 2256
                 SFE  C RL   FE+LKP+F  +E+          +QQA + I T  +  N   +
Sbjct: 213  RLCFRSFEGACARLHTCFENLKPLFQELENGSPMAILEPLMQQAFIGIDTLTTVANLYNL 272

Query: 2255 QKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVF--EDNKKEKADL--TNGP 2088
             +++QNK  LL+LL HIKN+YS + T EQ +E+D+ V  LVF  +DN  + +    T+  
Sbjct: 273  PRREQNKTTLLKLLFHIKNRYSDMLTPEQREEMDSRVRKLVFGEKDNVSDPSTSCGTSAI 332

Query: 2087 VVSLHGSNVLEKACLVPEA------LDLPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPS 1926
             VS     V     L  E+        LP+L +P +       SPLL+LHADY+E+SLPS
Sbjct: 333  NVSAPSGQVSNTGGLPFESGAANLFSSLPRLEVPAKRN-----SPLLNLHADYDENSLPS 387

Query: 1925 PTRENLPKFSIPKPIGLGMVLPVSSQPITAKNGGEDVM--LHPYVTDALKAVSSYQLKFG 1752
            PTR+N P F   KPIG G   P+  + ++  +  E     L+P + D LKAVSSYQ K+G
Sbjct: 388  PTRDNAPPFPALKPIGFG-AFPMVPEKLSFLDRVEPTKNSLYPPLNDPLKAVSSYQQKYG 446

Query: 1751 SNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXSCN-PRAVHAATQFQMVKSR------ 1593
              S+  +D LPSPTPS D G+             S   P+++   +  QM  S+      
Sbjct: 447  QKSVYPSDDLPSPTPSGDEGKPADKGGDIFSDVSSFPVPKSIVLPSTSQMPASQPSTVSS 506

Query: 1592 -------------SSAPCTNSS--ISNQSHP------VEQLNPMSKPALKPALKRRDPRL 1476
                         +S P T SS  IS  S P      +EQ       A+K A K RDPRL
Sbjct: 507  SSISYASSTSQMAASQPITVSSSGISYASGPPGFAKQIEQSTAGPNHAIKAASKSRDPRL 566

Query: 1475 KFVNNEVKSISDEG-RVTEPDLLKSDPVGVATNSKKHKT-DESVARDHMMKKQRHKLTTS 1302
            +F+N +    +D   R    +L   +  GV+  ++K K  D+    D+ +K+ R  +   
Sbjct: 567  RFLNRDSAGATDVNWRANFSELKDGNLGGVSVGNRKQKAVDDPQVDDNALKRFRGGIANQ 626

Query: 1301 REMETASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSG 1122
            R+M+                       N N  +++R    ++++         N   L  
Sbjct: 627  RDMQPTG--------------------NPNQLMNIRAPTHSSSI---------NMKTLQP 657

Query: 1121 LRSI-PKSNPTPTISLPSLLK---AVNPTILLQLHQMEQQRIAAENQKKNAVSTSDSANV 954
             ++  P  +  P + LP +L    AVNP +L+ L QME Q+ +A   +    S   +  +
Sbjct: 658  PQTTAPHVSAAPAVPLPPMLLKDIAVNPALLMHLIQMEHQKKSASESQGGMSSGMTNNGI 717

Query: 953  LSVNELPGTAASINSTPLKSKESGLNQPGIS-LIPSQMASSSTQPDVARIRMKPRDPRRI 777
              +   PG A  I              P +   +P Q    ++Q D   +RMKPRDPRRI
Sbjct: 718  AGMVFTPGNAPKITEAA--------QVPSVRPQVPVQTPPLNSQNDGGIVRMKPRDPRRI 769

Query: 776  LHDSMVQKNDGVVYQQSKIDAAASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXX 597
            LH+++ QK+D +  +Q K +               P+     L + +             
Sbjct: 770  LHNNIAQKSDAMSLEQVKNNGTTQPDSQGTKDQTTPVPSQPALPSSIARPFSSAKHVDPV 829

Query: 596  PCNNQPVASQADQVIVEAASG----------ELNDSETTSLLVSEVGSEKGTRQSANPWG 447
              +N  +A+ A     +A S           E N     +       +     Q  +PWG
Sbjct: 830  --SNSQLAATAIMAPTQALSSVNKVDPRLAVEQNGQNADATTNGASATTLEATQPVSPWG 887

Query: 446  DVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAH 267
            DVDHL DGY+D+QKA IQKER+RRI EQ+KMF+ARK           LNSAKFIEV+  H
Sbjct: 888  DVDHLLDGYDDQQKALIQKERARRITEQHKMFSARKLCLVLDLDHTLLNSAKFIEVEPIH 947

Query: 266  EDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYAT 87
            E++LR+KEEQD+ + +RHL+RF HM MWTKLRPGIWNFL+KASNL+ELHLYTMGNKLYAT
Sbjct: 948  EEMLRKKEEQDRTLPERHLYRFHHMNMWTKLRPGIWNFLQKASNLFELHLYTMGNKLYAT 1007

Query: 86   EMAKVLDPTGTLFAGRVISKGDDADTFD 3
            EMAKVLDPTGTLFAGRVIS+GDD D FD
Sbjct: 1008 EMAKVLDPTGTLFAGRVISRGDDGDPFD 1035


>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao]
          Length = 1290

 Score =  509 bits (1311), Expect = e-141
 Identities = 406/1116 (36%), Positives = 554/1116 (49%), Gaps = 104/1116 (9%)
 Frame = -2

Query: 3038 MLFAGSNLLFLNH--SEEKPLDLMARERPRGGRALDGETSDVDSSESLEEISAEDFKQE- 2868
            M   GSN +  +     E+ L  M ++  +     +GE SD   S S+EEIS EDF ++ 
Sbjct: 1    MYVVGSNWIEWSKLKKNEETLGEMGKDETKVEDVEEGEISD---SASIEEISEEDFNKQD 57

Query: 2867 ------------GRAG-RSRVWM-----GYP-MSKNYGPSLYNFAWAQAVQNKPL----- 2760
                        G A   SRVW       YP + + Y   LYNFAWAQAVQNKPL     
Sbjct: 58   VKILKESKSSKGGEANSNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFV 117

Query: 2759 -------------GLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQXXXXXXXXXXX 2619
                              P S+    ++ + KG     A  V+++D S+           
Sbjct: 118  KDFEQPQQDENKNSKRSSPSSSVASVNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNL 177

Query: 2618 XXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKK--ESDGEELQDISEFDKRISLILEEL 2445
                             E  +   D+ ++EP++K   S+   + +  E +KR +LI   L
Sbjct: 178  DKEE------------GELEEGEIDL-DSEPKEKVLSSEDGNVGNSDELEKRANLIRGVL 224

Query: 2444 DTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAVMAIQTTYSALNS 2265
            + +TV EAE SFE VC RL  + E L+ +   +E S       +Q A  AI + + ALN 
Sbjct: 225  EGVTVIEAEKSFEGVCSRLHNALESLRALI--LECSVPAKDALIQLAFGAINSAFVALN- 281

Query: 2264 VTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL---------------VF 2130
                 K+QN  +L RLL  +K     LF  +++KEID ++ SL               V 
Sbjct: 282  --CNSKEQNVAILSRLLSIVKGHDPSLFPPDKMKEIDVMLISLNSPARAIDTEKDMKVVD 339

Query: 2129 EDNKKEKADLTNGPVVSLHGSNVLEKACLV-----PEALDLPKLVLPTRSKNRVDFSPLL 1965
              NKK+   L       L  +N L  +        P AL           +NR    PLL
Sbjct: 340  GVNKKDPDALPENICHDLTVTNKLPSSAKFVINNKPNALTETLKPGVPNFRNRGISLPLL 399

Query: 1964 DLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAK--NGGEDVMLHPYVTD 1791
            DLH D++ DSLPSPTRE  P   + KP+  G V+ V S  +T K  +  E   LHPY TD
Sbjct: 400  DLHKDHDADSLPSPTRETTPCLPVNKPLTSGDVM-VKSGFMTGKGSHDAEGDKLHPYETD 458

Query: 1790 ALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGG-QGXXXXXXXXXXXXSCNPRAVHAATQ 1614
            ALKA S+YQ KFG  S  S+DRLPSPTPSE+ G +G              N +       
Sbjct: 459  ALKAFSTYQQKFGQGSFFSSDRLPSPTPSEESGDEGGDNGGEVSSSSSIGNFKPNLPILG 518

Query: 1613 FQMVKSRSSAPCTNSSISNQ--SHPVEQLNPMSKPALKPALKRRDPRLKFVNNEVKSISD 1440
              +V S       +SS+  Q  +     ++ +S    K   K RDPRL F N+   ++  
Sbjct: 519  HPIVSSAPLVDSASSSLQGQITTRNATPMSSVSNIVSKSLAKSRDPRLWFANSNASALDL 578

Query: 1439 EGRVTEPDLLKSDPVGVATNSKKHKT-DESVARDHMMKKQRHKLT---TSREMETASG-S 1275
              R+   +  K  PVG   +S+K K+ +E +     +K+QR++L     +R+++T SG  
Sbjct: 579  NERLLH-NASKVAPVGGIMDSRKKKSVEEPILDSPALKRQRNELENLGVARDVQTVSGIG 637

Query: 1274 GWSEAKNVI-PQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRSIPKSN 1098
            GW E  + I  Q + + Q  EN + + RK      V     +       +     +P ++
Sbjct: 638  GWLEDTDAIGSQITNRNQTAENLESNSRKMDN--GVTSSSTLSGKTNITVGTNEQVPVTS 695

Query: 1097 PTPTISLPSLLK--AVNPTILLQLHQM-EQQRIAAENQKKNAVSTSDSANVLSVNELPGT 927
             T T SLP+LLK  AVNPT+L+ + +M +QQR+ AE Q+K+      + +  S N L G 
Sbjct: 696  -TSTPSLPALLKDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGV 754

Query: 926  AASINSTPLKSKESGLN-QPGISLIPSQMASSSTQPDVARIRMKPRDPRRILHDSMVQKN 750
             +S N  P  S  +  +   GIS  P+      +  +  +IRMKPRDPRR+LH + +Q++
Sbjct: 755  VSSTNVIPSPSVNNVPSISSGISSKPAGNLQVPSPDESGKIRMKPRDPRRVLHGNSLQRS 814

Query: 749  DGVVYQQSKIDAA-ASDPQSSLVRLAA----------PL------------QLTKNLANV 639
              +   Q K + A  S  Q S   L A          P+            Q T NL N+
Sbjct: 815  GSMGLDQLKTNGALTSSTQGSKDNLNAQKLDSQTESKPMQSQLVPPPDITQQFTNNLKNI 874

Query: 638  LXXXXXXXXXXXXXPCNN----QPVASQADQVIVEAASGELNDSETTSLLVSEVGSEKGT 471
                          P ++    QPV  ++D + ++A      D +T + L  E G+  G 
Sbjct: 875  ADIMSVSQALTSLPPVSHNLVPQPVLIKSDSMDMKALVSNSEDQQTGAGLAPEAGA-TGP 933

Query: 470  RQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAK 291
            R S N WGDV+HLF+ Y+D+QKA IQ+ER+RRI EQ KMF+ARK           LNSAK
Sbjct: 934  R-SQNAWGDVEHLFERYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAK 992

Query: 290  FIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYT 111
            FIEVD  HE+ILR+KEEQD+E  +RHLFRF HMGMWTKLRPGIWNFLEKAS LYELHLYT
Sbjct: 993  FIEVDPVHEEILRKKEEQDREKPERHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYT 1052

Query: 110  MGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            MGNKLYATEMAKVLDP G LFAGRVIS+GDD D FD
Sbjct: 1053 MGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFD 1088


>ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Setaria italica]
          Length = 1074

 Score =  489 bits (1258), Expect = e-135
 Identities = 332/834 (39%), Positives = 441/834 (52%), Gaps = 27/834 (3%)
 Frame = -2

Query: 2423 AETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAVMAIQTTYSALNSVTMQKKD 2244
            A  SFE  C RL   FE+LKP++    S        V QA + I T  +  NS  + +K+
Sbjct: 81   AARSFEGTCARLHTCFENLKPLYPENGSPMPILDPLVHQAFIGIDTLTTVANSYNLPRKE 140

Query: 2243 QNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVFEDNKKEKADLTNGPVVSLHGSN 2064
            QNK +LL+LL HIKN+YS + TL+Q  E+D+ V  LVFED        T+G   S   S+
Sbjct: 141  QNKTMLLKLLFHIKNRYSSILTLDQRDELDSRVRQLVFEDKDNVNDPSTSGSAPSGQVSS 200

Query: 2063 ----VLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFS 1896
                    A        LP+L +P +       SPLLDLHADY+E+SLPSPTR+N P F 
Sbjct: 201  GRLPYESGAANSFSGSSLPRLEIPAKR-----ISPLLDLHADYDENSLPSPTRDNAPPFP 255

Query: 1895 IPKPIGLGMVLPVSSQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPS 1716
            +PKPIG G    V  +P   +       ++P + D LKAVSSYQ K+G  S+  +D LPS
Sbjct: 256  VPKPIGFGAFPMVPERPSFPERESGRNSIYPSLNDPLKAVSSYQQKYGQKSVFPSDDLPS 315

Query: 1715 PTPS-EDGGQGXXXXXXXXXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHP-- 1545
            PTPS +DG                  P+     +  QM  S+ +   + S+IS    P  
Sbjct: 316  PTPSGDDGKSADKGGDIFGEISSFPAPKKTALPSTSQMPASQPNT-TSGSNISYAGGPPG 374

Query: 1544 ----VEQLNPMSKPALKPALKRRDPRLKFVNNEVKSISDEG-RVTEPDLLKSD-PVGVAT 1383
                 EQL      ALK   K RDPRL+F+N +    +D   RV   DL   +   GV T
Sbjct: 375  YGKQAEQLAAGPNHALKATSKSRDPRLRFLNRDSAGATDANQRVNFSDLKDGNLGAGVPT 434

Query: 1382 NSKKHK-TDESVARDHMMKKQRHKLTTSREMETASGSGWSEAKNVIPQPSFKIQVNENFQ 1206
             ++KHK  DE    ++++K+ R               G  + +N++       Q+  N +
Sbjct: 435  INRKHKAVDEPQVDENVLKRFR--------------LGAGDPRNMLVPTGNPNQLMTNMR 480

Query: 1205 VDVRKSGTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLP-SLLK--AVNPTILLQ 1035
                 SG  A  P   P             S P+ +  P +SLP SLLK  A NPT+L+ 
Sbjct: 481  APPNSSG--ATTPFLHPT----------QSSAPQISAPPAVSLPSSLLKDIAGNPTVLMN 528

Query: 1034 LHQMEQQRIAAENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLI 855
              +MEQQ+++A   ++ A+    S+  +S+  + GT     S P K+ E+         +
Sbjct: 529  WIKMEQQKMSASEPQQVAM----SSGTISIG-IAGTVLPPGSAP-KTTEAAQVPSVRPQV 582

Query: 854  PSQMASSSTQPDVARIRMKPRDPRRILHDSMVQKNDGVVYQQSKIDAAASDPQSSLVRLA 675
              Q    ++Q D   +RMKPRDPRRILH+S+ QK D V  +Q K +    D Q +  +  
Sbjct: 583  LMQTPPLNSQNDTGILRMKPRDPRRILHNSIAQKTDAVGLEQHKSNGTKPDSQGTKDQTT 642

Query: 674  APLQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQADQVIVEAASGELNDSETTSLLVS 495
            + +     ++ +              P +N  +A+ A     + AS  L   +   L V 
Sbjct: 643  SMVSQPALVSGI--ARPFTMSTKHVDPVSNSQLAATALMAPTQQASSSLTRVD-PRLAVE 699

Query: 494  EVGSEKGTR----------QSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAA 345
            + G                Q  NPWGDVDHL DGY+D+QKA IQKER+RRI EQ+KMF+A
Sbjct: 700  QNGHNAYAANAPATPLEAVQPVNPWGDVDHLLDGYDDQQKALIQKERARRITEQHKMFSA 759

Query: 344  RKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPG 165
            RK           LNSAKFIEVD  HE+ILR+KEEQD+ M +RHL+RF HM MWTKLRPG
Sbjct: 760  RKLCLVLDLDHTLLNSAKFIEVDSVHEEILRKKEEQDRSMPERHLYRFHHMNMWTKLRPG 819

Query: 164  IWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            IWNFL+KAS L+ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVIS+GDD D FD
Sbjct: 820  IWNFLDKASKLFELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDPFD 873


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  488 bits (1257), Expect = e-135
 Identities = 380/1062 (35%), Positives = 528/1062 (49%), Gaps = 83/1062 (7%)
 Frame = -2

Query: 2939 DGETSDVDSSESLEEISAEDF-KQEGRAGR-------SRVWMGYPMS---------KNYG 2811
            D E  ++  S S+EEIS EDF KQE R  R       +RVW    +            Y 
Sbjct: 14   DVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADTRVWTMRDLQDLYKYHQACSGYT 73

Query: 2810 PSLYNFAWAQAVQNKPLG-------LDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQ 2652
            P LYN AWAQAVQNKPL         + K  S+   T   D+     +E   VI++DS  
Sbjct: 74   PRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTSRDDSSS--AKEVAKVIIDDSGD 131

Query: 2651 XXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISEFDK 2472
                                        +       +  NEPE    + E ++       
Sbjct: 132  EMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVE------- 184

Query: 2471 RISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMF---TGIESSDTXXXXXVQQAV 2301
            R+  I E+L+++TV EAE SF  VC RL+ +   L+ +F      ESS        QQ +
Sbjct: 185  RVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLI 244

Query: 2300 MAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL--VFE 2127
             AI+       S+   +K+ NK +  RLL  ++   S +F+++ +KE++ +++ L     
Sbjct: 245  NAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAA 304

Query: 2126 DNKKEKADLTNG-PVVSLHGSNVLE-------KACLVPEALDLPKLVLPTRSKNRVD--- 1980
             +  E +D  N   V      N+L+       +A    + L L  + + + ++N  D   
Sbjct: 305  QSSAEASDKVNDVQVTDGMNRNILDSSVESSGRAFASAKKLSLDSISVESYNQNNPDALK 364

Query: 1979 -----------FSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAK 1833
                       F PLLDLH D++EDSLPSPT +    F + K           S+ +TAK
Sbjct: 365  PGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVNK-----------SELVTAK 413

Query: 1832 NGGE--DVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQ--GXXXXXXX 1665
               E  D ++HPY TDALKAVS+YQ KFG  S L  D+LPSPTPSE+ G   G       
Sbjct: 414  VAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVS 473

Query: 1664 XXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSI-----SNQSHPVEQLNPMSKPALKPA 1500
                 S    A   A    +V   SSAP  +SSI       ++  +    P    ++  +
Sbjct: 474  SSSTISAPITANAPALGHPIV---SSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVAS 530

Query: 1499 LKRRDPRLKFVNNEVKS--ISDEGRVTEPDLLKSDPVGVATNSKKHKTDESVARD-HMMK 1329
             K RDPRL+  +++  S  +++       +  K DP+G   +S+K K+ E    D  + K
Sbjct: 531  AKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTK 590

Query: 1328 KQRHKLT---TSREMETASGS-GWSEAKN-VIPQPSFKIQVNENFQVDVRKSGTAAAVPD 1164
            +QR+ LT   T R+ +T   S GW E  N VIPQ   + Q+ EN   D +K  +   V  
Sbjct: 591  RQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKVTVTG 650

Query: 1163 KKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQL-HQMEQQRIAAENQ 993
                 D  +  ++G   +P    + T SL SLLK  AVNP + + + +++EQQ+  + + 
Sbjct: 651  IG--CDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQK--SGDP 706

Query: 992  KKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVA 813
             KN V    S ++L V   P + A +  + L  K +G           Q+  +    +  
Sbjct: 707  AKNTVLPPTSNSILGVVP-PASVAPLKPSALGQKPAG---------ALQVPQTGPMDESG 756

Query: 812  RIRMKPRDPRRILHDSMVQKNDGVVYQQSKIDAAASDPQSSLVRLAA--------PLQLT 657
            ++RMKPRDPRRILH +  Q++     +Q K +A   + Q+    + +          Q T
Sbjct: 757  KVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQTETKSVPSHSVNPPDISQQFT 816

Query: 656  KNLANVL----XXXXXXXXXXXXXPCNNQPVASQADQVIVEAASGELNDSETTSLLVSEV 489
            KNL N+                    ++Q V    D++ V+A   +  D  T +   S+ 
Sbjct: 817  KNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVSDSGDQLTAN--GSKP 874

Query: 488  GSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXX 309
             S  G  QS N WGDV+HLFDGY+D+QKA IQ+ER+RRI EQ KMF+ARK          
Sbjct: 875  ESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHT 934

Query: 308  XLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLY 129
             LNSAKF+EVD  H++ILR+KEEQD+E SQRHLFRF HMGMWTKLRPGIWNFLEKAS LY
Sbjct: 935  LLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLY 994

Query: 128  ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            ELHLYTMGNKLYATEMAKVLDP G LFAGRVISKGDD D  D
Sbjct: 995  ELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLD 1036


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  474 bits (1219), Expect = e-130
 Identities = 373/1073 (34%), Positives = 526/1073 (49%), Gaps = 90/1073 (8%)
 Frame = -2

Query: 2951 GRALDGETSDVDSSESLEEISAEDF-KQE--------------GRAGRSRVWM-----GY 2832
            G+  D E  ++  + S+EEIS +DF KQE                + + +VW       Y
Sbjct: 15   GKMEDVEEGEISDTASVEEISEDDFNKQEVVVVKETPSSTTNNNSSSKQKVWTVRDLYKY 74

Query: 2831 PMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTD--NVDAKGKPQEEAYDVIVEDS 2658
             +   Y   LYN AWAQAVQNKPL      +   D +   +V +    +E+   V+++DS
Sbjct: 75   QVGGGYMSGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSSVNSSKEDKRTVVIDDS 134

Query: 2657 SQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISEF 2478
                                       +  E  +L     + + E K   G    D    
Sbjct: 135  GDEMDVVKVID----------------IEKEEGELEEGEIDLDSEGKSEGGMVSVDT--- 175

Query: 2477 DKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAVM 2298
            +KR+  I E+L++++V + + SFEAVCL+L  + E LK +    E+        V+    
Sbjct: 176  EKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLFT 235

Query: 2297 AIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEI------DTLVNSL 2136
            AI    S  +S+  + K+QNK + +R L  + +     F+ E  KE+      D  + SL
Sbjct: 236  AIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEVCDFCNFDFRIVSL 295

Query: 2135 VFEDNKKEKADLTN-GPVVSLHGSNVLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLDL 1959
             +        DLT    + S   S V  K      +++ PK  +P+  K+R    PLLDL
Sbjct: 296  CY--------DLTTMNRLPSAAESFVHNKPNF---SIEPPKPGVPS-FKSRGVLLPLLDL 343

Query: 1958 HADYNEDSLPSPTRENLPKFSIPK--PIGLGMVLPVSSQPITAKNGGEDVMLHPYVTDAL 1785
               ++EDSLPSPTRE  P F + +  PIG GM+      P  A    E+  +HPY TDAL
Sbjct: 344  KKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASIT-EEPRVHPYETDAL 402

Query: 1784 KAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXSCNPRAVHAATQFQM 1605
            KAVSSYQ KF  NS   T+ LPSPTPSE+ G G            + N R V+     + 
Sbjct: 403  KAVSSYQKKFNLNSFF-TNELPSPTPSEESGNGDGDTAGEVSSSSTVNYRTVNPPVSDRK 461

Query: 1604 VKSRSSAP-------------CTNSSISNQSHPVEQLNPMSK---PALKPALKRRDPRLK 1473
              S S +P               NSSI     P     P+S      +K + K RDPRL+
Sbjct: 462  SASPSPSPPPPPPPPPPPPPHLNNSSI-RVVIPTRNSAPVSSGTSSTVKASAKSRDPRLR 520

Query: 1472 FVNNEVKSISDEGR----VTEPDLLKSDPVGVATNSKKHKTDESVARDHMMKKQRHKLTT 1305
            +VN +  ++    R    V  P   +++P G    S+K K +E V     +K+QR+    
Sbjct: 521  YVNTDASALDQNQRTLLMVNNPP--RAEPSGAIAGSRKQKIEEDVLDGTSLKRQRNSFDN 578

Query: 1304 S---REMETASGSG-WSEAKNVI-PQPSFKIQVNENFQVDVRKSG-----TAAAVPDKKP 1155
                R++ + +G+G W E  ++  PQ   K Q  EN +   R +      +  +V     
Sbjct: 579  FGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQRINNGVVCPSTGSVMSSVS 638

Query: 1154 IFDNNFDELSGLRSIPKSNPTP-----TISLPSLLK--AVNPTILLQLHQM-EQQRIAAE 999
               N    + G+ +I  S   P     T SLP LLK   VNPT+L+ + +M +QQR+A +
Sbjct: 639  CSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQRLALD 698

Query: 998  NQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGL--NQPGISLIPSQMASSSTQ 825
             Q+K A     +++  S N + G    +N+  + S  SG+     G +  PSQ+A   T 
Sbjct: 699  GQQKLADPAKSTSHPPSSNTVLGAIPEVNA--VSSLPSGILPRSAGKAQGPSQIA---TT 753

Query: 824  PDVARIRMKPRDPRRILHDSMVQKNDGVVYQQSKIDAAASDPQSSL-------------V 684
             +  +IRMKPRDPRR+LH++ +Q+   +  +Q K     S  Q +              +
Sbjct: 754  DESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQGTKDNQNLQKQEGLAEL 813

Query: 683  RLAAPLQL----TKNLANVLXXXXXXXXXXXXXPCNNQPVASQADQVIVEAASGELNDSE 516
            +   P  +    TK+L N+                + Q VASQ  Q+  +   G+   S 
Sbjct: 814  KPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVS-QNVASQPVQIKSDRVDGKTGISN 872

Query: 515  TTSLLVSEVGSE--KGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAAR 342
            +   +      E    +  S N W DV+HLF+GY+D+QKA IQ+ER+RRI EQ K+FAAR
Sbjct: 873  SDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAAR 932

Query: 341  KXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGI 162
            K           LNSAKF+EVD  H++ILR+KEEQD+E   RHLFRF HMGMWTKLRPGI
Sbjct: 933  KLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGI 992

Query: 161  WNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            WNFLEKAS LYELHLYTMGNKLYATEMAKVLDP G LFAGRV+S+GDD D  D
Sbjct: 993  WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLD 1045


>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum tuberosum]
          Length = 1218

 Score =  467 bits (1202), Expect = e-128
 Identities = 368/1081 (34%), Positives = 516/1081 (47%), Gaps = 99/1081 (9%)
 Frame = -2

Query: 2948 RALDGETSDVDSSESLEEISAEDFKQE------------------GRAGRSRVWM----- 2838
            R  D E  ++  S S+EEIS + F ++                       +RVW      
Sbjct: 6    RVEDVEEGEISDSASVEEISEDAFNRQDPPTTTKIKIASNENQNQNSTTTTRVWTMRDAY 65

Query: 2837 GYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAY-DVIVED 2661
             YP+S++Y   LYN AWAQAVQNKPL  +L  M++ +     +A    + +   DV V+D
Sbjct: 66   KYPISRDYARGLYNLAWAQAVQNKPLD-ELFVMTSDNSNQCANANANVESKVIIDVDVDD 124

Query: 2660 SSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISE 2481
             ++                                      E E E+ E D +    +  
Sbjct: 125  DAKE-------------------------------------EGELEEGEIDLDAADLVLN 147

Query: 2480 FDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAV 2301
            F K  + + E+L ++T++E   SF  VC +L+ S   L  +    + +D       Q  +
Sbjct: 148  FGKEANFVREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQDKNDILI----QLFM 203

Query: 2300 MAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL----V 2133
             A++T  S   S+   +K QN  +L RLL H K Q   L + EQ+KE+D ++ S+    V
Sbjct: 204  TALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQLPALLSSEQLKEVDAVILSINQSAV 263

Query: 2132 FEDNKKEKADLTNG-PVVSLHGSNVLEKAC-------LVPEALDLPKLVLPTRSKNRVDF 1977
            F + +    D  NG  VV L    V  K+              DL  + + +        
Sbjct: 264  FSNTQDN--DKVNGIKVVELLDKKVSHKSSENANQDFTAVNKYDLGAVSIKSSGLKEQSV 321

Query: 1976 S------------------PLLDLHADYNEDSLPSPTRENLPKFSIPKPIGL-GMV---L 1863
            S                  PLLDLH D++ED+LPSPTRE  P+F + K     GMV   L
Sbjct: 322  SFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPTREIGPQFPVAKATQAHGMVKLDL 381

Query: 1862 PVSSQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGX 1683
            P+ +  +   N     +LHPY TDALKAVSSYQ KFG +S+  ++ LPSPTPSE+G  G 
Sbjct: 382  PIFAGSLEKGNS----LLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEGDSGK 437

Query: 1682 XXXXXXXXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHPVEQLNPMS---KPA 1512
                         +  A H           SS P TN             +P+S    P+
Sbjct: 438  GDIGGEVTSLDVVH-NASHLNESSMGQPILSSVPQTNILDGQGLGTARTADPLSFLPNPS 496

Query: 1511 LKPAL-KRRDPRLKFVNNE-VKSISDEGRVTEPDL-LKSDPVGVATNSKKHKT-DESVAR 1344
            L+ +  K RDPRL+   ++ V   +++  +  PD+ LK +       SKK KT D  V  
Sbjct: 497  LRSSTAKSRDPRLRLATSDAVAQNTNKNILPIPDIDLKLEASLEMIGSKKQKTVDLPVFG 556

Query: 1343 DHMMKKQRHKLTTS---REMETASGSG-WSEAKNVIPQPSFKIQ-VNENFQVDVRK---- 1191
              + K+QR + T S    ++  ++G+G W E +     P        ++   D+RK    
Sbjct: 557  APLPKRQRSEQTDSIIVSDVRPSTGNGGWLEDRGTAGLPITSSNCATDSSDNDIRKLEQV 616

Query: 1190 SGTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQLHQMEQ 1017
            + T A +P        NF         P +  + + +L SLLK  A+NP+I + + +MEQ
Sbjct: 617  TATIATIPSVIVNAAENF---------PVTGISTSTTLHSLLKDIAINPSIWMNIIKMEQ 667

Query: 1016 QRIAAENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLIPSQMAS 837
            Q+ +A+  +      S S ++L      G   S ++   +S   G    GI   P+  AS
Sbjct: 668  QK-SADASRTTTAQASSSKSIL------GAVPSTDAIAPRSSAIGQRSVGILQTPTHTAS 720

Query: 836  SSTQPDVARIRMKPRDPRRILHDSMVQKNDGVVYQQSKIDAAAS---------------- 705
            +    +VA +RMKPRDPRR+LH++ V K   V   Q K   A +                
Sbjct: 721  AD---EVAIVRMKPRDPRRVLHNTAVLKGGNVGSDQCKTGVAGTHATISNLGFQSQEDQL 777

Query: 704  DPQSSLVRLAAP----LQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQADQVIVEAAS 537
            D +S++     P     Q TKNL N+                  Q    Q+ Q   E   
Sbjct: 778  DRKSAVTLSTTPPDIARQFTKNLKNIADMISVSPSTSLSAASQTQTQCLQSHQSRSEGKE 837

Query: 536  GELNDSETTSLLVSEVGSEKGTRQSANP---WGDVDHLFDGYNDEQKATIQKERSRRIAE 366
                 SE  +   + + SEKG+  S  P   WGDV+HLF+GY+D+Q+A IQ+ER+RR+ E
Sbjct: 838  AVSEPSERVN--DAGLASEKGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERARRLEE 895

Query: 365  QNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGM 186
            Q KMF+ RK           LNSAKF+E+D  HE+ILR+KEEQD+E   RHLFRF HMGM
Sbjct: 896  QKKMFSVRKLCLVLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPCRHLFRFPHMGM 955

Query: 185  WTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTF 6
            WTKLRPGIWNFLEKASNL+ELHLYTMGNKLYATEMAK+LDP G LFAGRVIS+GDD D F
Sbjct: 956  WTKLRPGIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPF 1015

Query: 5    D 3
            D
Sbjct: 1016 D 1016


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  464 bits (1195), Expect = e-128
 Identities = 364/1038 (35%), Positives = 506/1038 (48%), Gaps = 59/1038 (5%)
 Frame = -2

Query: 2939 DGETSDVDSSESLEEISAEDF-KQEGRAGR-------SRVWMGYPMS---------KNYG 2811
            D E  ++  S S+EEIS EDF KQE R  R       +RVW    +            Y 
Sbjct: 54   DVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADTRVWTMRDLQDLYKYHQACSGYT 113

Query: 2810 PSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQXXXXXXX 2631
            P LYN AWAQAVQNKPL          D+   +D  G    +  DV ++D S+       
Sbjct: 114  PRLYNLAWAQAVQNKPLN---------DIFVIIDDSG----DEMDVKMDDVSEKEEGELE 160

Query: 2630 XXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISEFDKRISLILE 2451
                              V DE   L  D+ E E + KE          E  +R+  I E
Sbjct: 161  EGEIDLDSEPD-------VKDEGGVL--DVNEPEIDLKER---------ELVERVKSIQE 202

Query: 2450 ELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGI---ESSDTXXXXXVQQAVMAIQTTY 2280
            +L+++TV EAE SF  VC RL+ +   L+ +F      ESS        QQ + AI+   
Sbjct: 203  DLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALN 262

Query: 2279 SALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL--------VFED 2124
                S+   +K+ NK +  RLL  ++   S +F+++ +KE++ +++ L            
Sbjct: 263  HVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEAS 322

Query: 2123 NKKEKADLTNGPVVSLHGSNVLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLDLHADYN 1944
            +K     +T+G   ++  S+V         A          + + R  F PLLDLH D++
Sbjct: 323  DKVNDVQVTDGMNRNILDSSVESSGRAFASA---------KKFRGRFIFGPLLDLHKDHD 373

Query: 1943 EDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAKNGGE--DVMLHPYVTDALKAVSS 1770
            EDSLPSPT +    F + K           S+ +TAK   E  D ++HPY TDALKAVS+
Sbjct: 374  EDSLPSPTGKAPQCFPVNK-----------SELVTAKVAHETQDSIMHPYETDALKAVST 422

Query: 1769 YQLKFGSNSILSTDRLPSPTPSEDGGQ------GXXXXXXXXXXXXSCNPRA-----VHA 1623
            YQ KFG  S L  D+LPSPTPSE+ G       G            + N  A     V +
Sbjct: 423  YQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSS 482

Query: 1622 ATQFQMVKSRSSAPCTNSSISNQSHPVEQLNPMSKPALKPALKRRDPRLKFVNNEVKSIS 1443
            A Q  +V+     P    +++++ + +          L+ + K RDPRL+  +++  S+ 
Sbjct: 483  APQMDIVQGLV-VPRNTGAVNSRFNSI----------LRASAKSRDPRLRLASSDAGSLD 531

Query: 1442 DEGRVTEP--DLLKSDPVGVATNSKKHKTDESVARDH-MMKKQRHKLTTSREMETASGSG 1272
               R      +  K DP+G   +S+K K+ E    D  + K+QR+ LT+           
Sbjct: 532  LNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTS----------- 580

Query: 1271 WSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRSIPKSNPT 1092
                      P+ K++             T   +   KP     +  ++G   +P    +
Sbjct: 581  ----------PATKLE----------SKVTVTGIGCDKP-----YVTVNGNEHLPVVATS 615

Query: 1091 PTISLPSLLK--AVNPTILLQL-HQMEQQRIAAENQKKNAVSTSDSANVLSVNELPGTAA 921
             T SL SLLK  AVNP + + + +++EQQ+  + +  KN V    S ++L      G   
Sbjct: 616  TTASLQSLLKDIAVNPAVWMNIFNKVEQQK--SGDPAKNTVLPPTSNSIL------GVVP 667

Query: 920  SINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVARIRMKPRDPRRILHDSMVQKNDGV 741
              +  PLK    G    G   +P Q    + Q +  ++RMKPRDPRRILH +  Q++   
Sbjct: 668  PASVAPLKPSALGQKPAGALQVP-QTGPMNPQDESGKVRMKPRDPRRILHANSFQRSGSS 726

Query: 740  VYQQSKIDAAASDPQSSLVRLAA--------PLQLTKNLANVLXXXXXXXXXXXXXP--- 594
              +Q K +A   + Q+    + +          Q TKNL N+                  
Sbjct: 727  GSEQFKTNAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQ 786

Query: 593  -CNNQPVASQADQVIVEAASGELNDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYN 417
              ++Q V    D++ V+A   +  D  T +   S+  S  G  QS N WGDV+HLFDGY+
Sbjct: 787  ILSSQSVQVNTDRMDVKATVSDSGDQLTAN--GSKPESAAGPPQSKNTWGDVEHLFDGYD 844

Query: 416  DEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQ 237
            D+QKA IQ+ER+RRI EQ KMF+ARK           LNSAKF+EVD  H++ILR+KEEQ
Sbjct: 845  DQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQ 904

Query: 236  DKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTG 57
            D+E SQRHLFRF HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNKLYATEMAKVLDP G
Sbjct: 905  DREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKG 964

Query: 56   TLFAGRVISKGDDADTFD 3
             LFAGRVISKGDD D  D
Sbjct: 965  VLFAGRVISKGDDGDVLD 982


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3-like
            [Citrus sinensis] gi|557541056|gb|ESR52100.1|
            hypothetical protein CICLE_v10030535mg [Citrus
            clementina]
          Length = 1234

 Score =  464 bits (1194), Expect = e-127
 Identities = 375/1095 (34%), Positives = 539/1095 (49%), Gaps = 116/1095 (10%)
 Frame = -2

Query: 2939 DGETSDVDSSESLEEISAEDFK--QE---------------GRAGRSRVWM------GYP 2829
            D E  ++  + S+EEIS EDFK  QE               G    +RVW        YP
Sbjct: 4    DVEEGEISDTASVEEISEEDFKIKQEEVVKVVKETKPIKVGGGEAAARVWTMRDLYNKYP 63

Query: 2828 -MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQ 2652
             + + YGP L+N AWAQAVQNKPL  ++  M A    D+V  +  P      V       
Sbjct: 64   AICRGYGPGLHNLAWAQAVQNKPLN-EIFVMEAEQ--DDVSKRSSPASSVASV------- 113

Query: 2651 XXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISEFDK 2472
                                    +V+D+    S D  E E  + E    EL   SE ++
Sbjct: 114  --------NSGAAAGKDDKKVVEKVVIDD----SGDEIEKEEGELEEGEIELDLESESNE 161

Query: 2471 RIS-LILEELDTITVE----------EAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXX 2325
            ++S  + EE+  I VE            + SFE VC +L  + E L+ +    E++    
Sbjct: 162  KVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELVN--ENNVPTK 219

Query: 2324 XXXVQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLV 2145
               +Q A  A+Q+ +S   S+    K+QNK++L RLL  IK+    LF+  Q+KE++ ++
Sbjct: 220  DALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAML 279

Query: 2144 NSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALD----LPKLVLPTRS------ 1995
            +SLV   N KEK       ++++HG N  +   +   A++      K+ LP  S      
Sbjct: 280  SSLVTRANDKEK------DMLAMHGVNGKDSNIVTENAVNDLNFKEKVPLPVDSLMQNKP 333

Query: 1994 -----------KNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQ 1848
                       ++R    PLLD H  ++ DSLPSPTRE  P   + + + +G  +  S  
Sbjct: 334  LEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWA 393

Query: 1847 PITAKNGGEDVMLHP-YVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXX 1671
                 +   +V   P Y TDAL+A SSYQ KFG NS      LPSPTPSE+ G G     
Sbjct: 394  AAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTG 453

Query: 1670 XXXXXXXSCN-PRAVHAATQFQMVKSRS----SAPCTNSSI-----SNQSHPVEQ-LNPM 1524
                   + + P+ V+  T  Q   S      S P   SS+     +N S P     NP+
Sbjct: 454  GEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPV 513

Query: 1523 SK--PALKPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHKT-DES 1353
             K  P +K  +K RDPRL+F ++   +++ +      +  K +PVG   +S+K KT +E 
Sbjct: 514  VKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEP 573

Query: 1352 VARDHMMKKQRHKLTTS---REMETASGS-GWSEAKNVIPQPSFKIQVNENFQVDVRKS- 1188
            V     +K+QR+    S   R+ +   GS GW E  ++  +P     +N N  VD  +S 
Sbjct: 574  VLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMF-EPQI---MNRNLLVDSAESN 629

Query: 1187 ------GTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQL 1032
                  G  + +    P        +SG    P + P+ T+SLP+LLK  AVNPT+LL +
Sbjct: 630  SRKLDNGATSPITSGTPNV-----VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNI 684

Query: 1031 HQM-EQQRIAAENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLI 855
             +M +QQ++AA+ Q+K+  S+ ++ +    + +P  + + +                  I
Sbjct: 685  LKMGQQQKLAADAQQKSNDSSMNTMHPPIPSSIPPVSVTCS------------------I 726

Query: 854  PSQMASSSTQPDVARIRMKPRDPRRILHDSMVQ---------KNDGV-----------VY 735
            PS +  S    ++ ++RMKPRDPRR+LH + +Q         K DG            + 
Sbjct: 727  PSGIL-SKPMDELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLN 785

Query: 734  QQSKIDAAASDP--QSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQAD 561
             Q ++ A  + P    S+++     Q TKNL ++              P  ++P+ SQ  
Sbjct: 786  FQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHI------ADFMSVSQPLTSEPMVSQNS 839

Query: 560  QV---------IVEAASGELNDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYNDEQ 408
             +          ++A     +D +T +    E G      QSA  WGDV+HLF+GY+D+Q
Sbjct: 840  PIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQ 897

Query: 407  KATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKE 228
            KA IQKER+RR+ EQ KMF+ARK           LNSAKF EVD  H++ILR+KEEQD+E
Sbjct: 898  KAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDRE 957

Query: 227  MSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLF 48
               RHLFRF HMGMWTKLRPGIW FLE+AS L+E+HLYTMGNKLYATEMAKVLDP G LF
Sbjct: 958  KPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLF 1017

Query: 47   AGRVISKGDDADTFD 3
            AGRVIS+GDD D FD
Sbjct: 1018 AGRVISRGDDGDPFD 1032


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|557541054|gb|ESR52098.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score =  464 bits (1194), Expect = e-127
 Identities = 375/1095 (34%), Positives = 539/1095 (49%), Gaps = 116/1095 (10%)
 Frame = -2

Query: 2939 DGETSDVDSSESLEEISAEDFK--QE---------------GRAGRSRVWM------GYP 2829
            D E  ++  + S+EEIS EDFK  QE               G    +RVW        YP
Sbjct: 4    DVEEGEISDTASVEEISEEDFKIKQEEVVKVVKETKPIKVGGGEAAARVWTMRDLYNKYP 63

Query: 2828 -MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQ 2652
             + + YGP L+N AWAQAVQNKPL  ++  M A    D+V  +  P      V       
Sbjct: 64   AICRGYGPGLHNLAWAQAVQNKPLN-EIFVMEAEQ--DDVSKRSSPASSVASV------- 113

Query: 2651 XXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISEFDK 2472
                                    +V+D+    S D  E E  + E    EL   SE ++
Sbjct: 114  --------NSGAAAGKDDKKVVEKVVIDD----SGDEIEKEEGELEEGEIELDLESESNE 161

Query: 2471 RIS-LILEELDTITVE----------EAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXX 2325
            ++S  + EE+  I VE            + SFE VC +L  + E L+ +    E++    
Sbjct: 162  KVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELVN--ENNVPTK 219

Query: 2324 XXXVQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLV 2145
               +Q A  A+Q+ +S   S+    K+QNK++L RLL  IK+    LF+  Q+KE++ ++
Sbjct: 220  DALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAML 279

Query: 2144 NSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALD----LPKLVLPTRS------ 1995
            +SLV   N KEK       ++++HG N  +   +   A++      K+ LP  S      
Sbjct: 280  SSLVTRANDKEK------DMLAMHGVNGKDSNIVTENAVNDLNFKEKVPLPVDSLMQNKP 333

Query: 1994 -----------KNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQ 1848
                       ++R    PLLD H  ++ DSLPSPTRE  P   + + + +G  +  S  
Sbjct: 334  LEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWA 393

Query: 1847 PITAKNGGEDVMLHP-YVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXX 1671
                 +   +V   P Y TDAL+A SSYQ KFG NS      LPSPTPSE+ G G     
Sbjct: 394  AAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTG 453

Query: 1670 XXXXXXXSCN-PRAVHAATQFQMVKSRS----SAPCTNSSI-----SNQSHPVEQ-LNPM 1524
                   + + P+ V+  T  Q   S      S P   SS+     +N S P     NP+
Sbjct: 454  GEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPV 513

Query: 1523 SK--PALKPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHKT-DES 1353
             K  P +K  +K RDPRL+F ++   +++ +      +  K +PVG   +S+K KT +E 
Sbjct: 514  VKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEP 573

Query: 1352 VARDHMMKKQRHKLTTS---REMETASGS-GWSEAKNVIPQPSFKIQVNENFQVDVRKS- 1188
            V     +K+QR+    S   R+ +   GS GW E  ++  +P     +N N  VD  +S 
Sbjct: 574  VLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMF-EPQI---MNRNLLVDSAESN 629

Query: 1187 ------GTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQL 1032
                  G  + +    P        +SG    P + P+ T+SLP+LLK  AVNPT+LL +
Sbjct: 630  SRKLDNGATSPITSGTPNV-----VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNI 684

Query: 1031 HQM-EQQRIAAENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLI 855
             +M +QQ++AA+ Q+K+  S+ ++ +    + +P  + + +                  I
Sbjct: 685  LKMGQQQKLAADAQQKSNDSSMNTMHPPIPSSIPPVSVTCS------------------I 726

Query: 854  PSQMASSSTQPDVARIRMKPRDPRRILHDSMVQ---------KNDGV-----------VY 735
            PS +  S    ++ ++RMKPRDPRR+LH + +Q         K DG            + 
Sbjct: 727  PSGIL-SKPMDELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLN 785

Query: 734  QQSKIDAAASDP--QSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQAD 561
             Q ++ A  + P    S+++     Q TKNL ++              P  ++P+ SQ  
Sbjct: 786  FQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHI------ADFMSVSQPLTSEPMVSQNS 839

Query: 560  QV---------IVEAASGELNDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYNDEQ 408
             +          ++A     +D +T +    E G      QSA  WGDV+HLF+GY+D+Q
Sbjct: 840  PIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQ 897

Query: 407  KATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKE 228
            KA IQKER+RR+ EQ KMF+ARK           LNSAKF EVD  H++ILR+KEEQD+E
Sbjct: 898  KAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDRE 957

Query: 227  MSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLF 48
               RHLFRF HMGMWTKLRPGIW FLE+AS L+E+HLYTMGNKLYATEMAKVLDP G LF
Sbjct: 958  KPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLF 1017

Query: 47   AGRVISKGDDADTFD 3
            AGRVIS+GDD D FD
Sbjct: 1018 AGRVISRGDDGDPFD 1032


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|567892677|ref|XP_006438859.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541053|gb|ESR52097.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541055|gb|ESR52099.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score =  464 bits (1194), Expect = e-127
 Identities = 375/1095 (34%), Positives = 539/1095 (49%), Gaps = 116/1095 (10%)
 Frame = -2

Query: 2939 DGETSDVDSSESLEEISAEDFK--QE---------------GRAGRSRVWM------GYP 2829
            D E  ++  + S+EEIS EDFK  QE               G    +RVW        YP
Sbjct: 4    DVEEGEISDTASVEEISEEDFKIKQEEVVKVVKETKPIKVGGGEAAARVWTMRDLYNKYP 63

Query: 2828 -MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQ 2652
             + + YGP L+N AWAQAVQNKPL  ++  M A    D+V  +  P      V       
Sbjct: 64   AICRGYGPGLHNLAWAQAVQNKPLN-EIFVMEAEQ--DDVSKRSSPASSVASV------- 113

Query: 2651 XXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISEFDK 2472
                                    +V+D+    S D  E E  + E    EL   SE ++
Sbjct: 114  --------NSGAAAGKDDKKVVEKVVIDD----SGDEIEKEEGELEEGEIELDLESESNE 161

Query: 2471 RIS-LILEELDTITVE----------EAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXX 2325
            ++S  + EE+  I VE            + SFE VC +L  + E L+ +    E++    
Sbjct: 162  KVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELVN--ENNVPTK 219

Query: 2324 XXXVQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLV 2145
               +Q A  A+Q+ +S   S+    K+QNK++L RLL  IK+    LF+  Q+KE++ ++
Sbjct: 220  DALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAML 279

Query: 2144 NSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALD----LPKLVLPTRS------ 1995
            +SLV   N KEK       ++++HG N  +   +   A++      K+ LP  S      
Sbjct: 280  SSLVTRANDKEK------DMLAMHGVNGKDSNIVTENAVNDLNFKEKVPLPVDSLMQNKP 333

Query: 1994 -----------KNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQ 1848
                       ++R    PLLD H  ++ DSLPSPTRE  P   + + + +G  +  S  
Sbjct: 334  LEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWA 393

Query: 1847 PITAKNGGEDVMLHP-YVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXX 1671
                 +   +V   P Y TDAL+A SSYQ KFG NS      LPSPTPSE+ G G     
Sbjct: 394  AAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTG 453

Query: 1670 XXXXXXXSCN-PRAVHAATQFQMVKSRS----SAPCTNSSI-----SNQSHPVEQ-LNPM 1524
                   + + P+ V+  T  Q   S      S P   SS+     +N S P     NP+
Sbjct: 454  GEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPV 513

Query: 1523 SK--PALKPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHKT-DES 1353
             K  P +K  +K RDPRL+F ++   +++ +      +  K +PVG   +S+K KT +E 
Sbjct: 514  VKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEP 573

Query: 1352 VARDHMMKKQRHKLTTS---REMETASGS-GWSEAKNVIPQPSFKIQVNENFQVDVRKS- 1188
            V     +K+QR+    S   R+ +   GS GW E  ++  +P     +N N  VD  +S 
Sbjct: 574  VLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMF-EPQI---MNRNLLVDSAESN 629

Query: 1187 ------GTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQL 1032
                  G  + +    P        +SG    P + P+ T+SLP+LLK  AVNPT+LL +
Sbjct: 630  SRKLDNGATSPITSGTPNV-----VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNI 684

Query: 1031 HQM-EQQRIAAENQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLI 855
             +M +QQ++AA+ Q+K+  S+ ++ +    + +P  + + +                  I
Sbjct: 685  LKMGQQQKLAADAQQKSNDSSMNTMHPPIPSSIPPVSVTCS------------------I 726

Query: 854  PSQMASSSTQPDVARIRMKPRDPRRILHDSMVQ---------KNDGV-----------VY 735
            PS +  S    ++ ++RMKPRDPRR+LH + +Q         K DG            + 
Sbjct: 727  PSGIL-SKPMDELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLN 785

Query: 734  QQSKIDAAASDP--QSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQAD 561
             Q ++ A  + P    S+++     Q TKNL ++              P  ++P+ SQ  
Sbjct: 786  FQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHI------ADFMSVSQPLTSEPMVSQNS 839

Query: 560  QV---------IVEAASGELNDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYNDEQ 408
             +          ++A     +D +T +    E G      QSA  WGDV+HLF+GY+D+Q
Sbjct: 840  PIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQ 897

Query: 407  KATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKE 228
            KA IQKER+RR+ EQ KMF+ARK           LNSAKF EVD  H++ILR+KEEQD+E
Sbjct: 898  KAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDRE 957

Query: 227  MSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLF 48
               RHLFRF HMGMWTKLRPGIW FLE+AS L+E+HLYTMGNKLYATEMAKVLDP G LF
Sbjct: 958  KPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLF 1017

Query: 47   AGRVISKGDDADTFD 3
            AGRVIS+GDD D FD
Sbjct: 1018 AGRVISRGDDGDPFD 1032


>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
            gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
            3 [Populus trichocarpa]
          Length = 1190

 Score =  462 bits (1189), Expect = e-127
 Identities = 370/1056 (35%), Positives = 517/1056 (48%), Gaps = 68/1056 (6%)
 Frame = -2

Query: 2966 ERPRGGRAL---DGETSDVDSSESLEEISAEDF-KQE---------GRAGRSRVWM---- 2838
            E   GGR+    D E  ++  + S+EEIS EDF KQE               +VW     
Sbjct: 5    ETAGGGRSSGIEDVEEGEISDTASVEEISEEDFNKQEVVIVKETPSSNNSSQKVWTVRDL 64

Query: 2837 -GYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVED 2661
              Y +   Y   LYN AWA+AVQNKPL          +LT  +D  G   +    + +E 
Sbjct: 65   YKYQVGGGYMSGLYNLAWARAVQNKPLN---------ELTVVIDDSGDEMDVVKVIDIEK 115

Query: 2660 SSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDISE 2481
                                           E  +   D+ ++EP   +S+G    D+  
Sbjct: 116  EE----------------------------GELEEGEIDL-DSEPVVVQSEGMVSVDV-- 144

Query: 2480 FDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQAV 2301
             + R+  I ++L++++V E E SFEAVCL+L K  E LK +  G ++S       VQ   
Sbjct: 145  -ENRVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQLLF 203

Query: 2300 MAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEI------DTLVNS 2139
            MAI+   S   S+  + K+QNK +  R    + + Y   F+  Q KE+      D+L  +
Sbjct: 204  MAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEVLNENHNDSLAKT 263

Query: 2138 LVFE-DNKKEKADLTNGPVVSLHGSNVLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLD 1962
              ++     EK      P       N   K+   P+   +P        K+R    PLLD
Sbjct: 264  AGYDLTTMSEKL-----PAAETFVQNKPNKSIEAPKPPGVPSF------KSRGVLLPLLD 312

Query: 1961 LHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAKNG-GEDVMLHPYVTDAL 1785
            L   ++EDSLPSPT+E  P F + + + +G  +  S  P+       E+  +HPY TDAL
Sbjct: 313  LKKYHDEDSLPSPTQETTP-FPVQRLLAIGDGMVSSGLPVPKVTPVAEEPRMHPYETDAL 371

Query: 1784 KAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXSC-NPRAVHAATQFQ 1608
            KAVSSYQ KF  NS   T+ LPSPTPSE+ G G            +  N R V+     Q
Sbjct: 372  KAVSSYQQKFNRNSFF-TNELPSPTPSEESGNGDGDTAGEVSSSSTVVNYRTVNPPVSDQ 430

Query: 1607 MVKSRSSAPCT------NSSISNQSHPVEQLNPMSK---PALKPALKRRDPRLKFVNNEV 1455
                 S  P        +SS      P     P+S      +K + K RDPRL++VN + 
Sbjct: 431  KNAPPSPPPLPPPPPHPDSSNIRGVVPTRNSAPVSSGPSSTIKASAKSRDPRLRYVNIDA 490

Query: 1454 KSISDEGRVTEP--DLLKSDPVGVATNSKKHKTDESVARDHMMKKQRHKLTTS---REME 1290
             ++    R      +L + +P G    SKKHK +E V  D  +K+QR+        R++E
Sbjct: 491  CALDHNQRALPMVNNLPRVEPAGAIVGSKKHKIEEDVLDDPSLKRQRNSFDNYGAVRDIE 550

Query: 1289 TASGSG-WSEAKNVI-PQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLR 1116
            + +G+G W E  ++  PQ   K Q  EN  V+   SG A     + P        ++G  
Sbjct: 551  SMTGTGGWLEDTDMAEPQTVNKNQWAENSNVN--GSGNA-----QSPFM--GISNITGSE 601

Query: 1115 SIPKSNPTPTISLPSLLK--AVNPTILLQLHQM-EQQRIAAENQKKNAVSTSDSANVLSV 945
                ++ T T SLP LLK  AVNPT+L+ + +M +QQR+A + Q+  +     +++    
Sbjct: 602  QAQVTS-TATTSLPDLLKDIAVNPTMLINILKMGQQQRLALDGQQTLSDPAKSTSHPPIS 660

Query: 944  NELPGTAASINSTPLKSKESGL-NQPGISLIPSQMASSSTQPDVARIRMKPRDPRRILHD 768
            N + G   ++N     S+ SG+  +P  + +PSQ+A+S    +  +IRMKPRDPRR LH+
Sbjct: 661  NTVLGAIPTVNVA--SSQPSGIFPRPAGTPVPSQIATSD---ESGKIRMKPRDPRRFLHN 715

Query: 767  SMVQKNDGVVYQQSKI-----------DAAASDPQSSLVRLAAPLQ------LTKNLANV 639
            + +Q+   +  +Q K            D      Q  L  L   +        TK+L N+
Sbjct: 716  NSLQRAGSMGSEQFKTTTLTPTTQGTKDDQNVQKQEGLAELKPTVPPDISFPFTKSLENI 775

Query: 638  LXXXXXXXXXXXXXPCNNQPVASQADQVIVEAASGE----LNDSETTSLLVSEVGSEKGT 471
                            + Q VASQ  Q   E   G+    ++D +T      EV +   +
Sbjct: 776  ADILSVSQASTTPPFIS-QNVASQPMQTKSERVDGKTGISISDQKTGPASSPEVVA--AS 832

Query: 470  RQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXLNSAK 291
              S N W DV+HLF+GY+D+QKA IQ+ER+RR+ EQ KMFAARK           LNSAK
Sbjct: 833  SHSQNTWKDVEHLFEGYDDQQKAAIQRERARRLEEQKKMFAARKLCLVLDLDHTLLNSAK 892

Query: 290  FIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYT 111
             I     H++ILR+KEEQD+E   RH+FR  HMGMWTKLRPGIWNFLEKAS L+ELHLYT
Sbjct: 893  AILSSSLHDEILRKKEEQDREKPYRHIFRIPHMGMWTKLRPGIWNFLEKASKLFELHLYT 952

Query: 110  MGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            MGNKLYATEMAKVLDP G LFAGRVIS+GDD D FD
Sbjct: 953  MGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFD 988


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum lycopersicum]
          Length = 1211

 Score =  457 bits (1175), Expect = e-125
 Identities = 361/1075 (33%), Positives = 508/1075 (47%), Gaps = 93/1075 (8%)
 Frame = -2

Query: 2948 RALDGETSDVDSSESLEEISAEDFKQEGRAGRS---------------------RVWM-- 2838
            R  D E  ++  S S+EEIS + F ++     S                     RVW   
Sbjct: 6    RVEDAEEGEISDSASVEEISEDAFNRQDPPTTSTTSKIKIASNENQNQNSTTATRVWTMR 65

Query: 2837 ---GYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIV 2667
                YP+S++Y   LYN AWAQAVQNKPL  +L  M++ +     + + K      DV V
Sbjct: 66   DVYKYPISRDYARGLYNLAWAQAVQNKPLD-ELFVMTSDNSNQCANGESKV---IIDVDV 121

Query: 2666 EDSSQXXXXXXXXXXXXXXXXXXXXXXXXLVVDETTQLSSDIPENEPEKKESDGEELQDI 2487
            +D ++                                      E E E+ E D +    +
Sbjct: 122  DDDAKE-------------------------------------EGELEEGEIDLDSADLV 144

Query: 2486 SEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXVQQ 2307
              F K  + I E+L ++T++E   SF  VC +L+ S   L  +    + +D       Q 
Sbjct: 145  VNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQDKNDILI----QL 200

Query: 2306 AVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL--- 2136
             + A++T  S   S+   +K QN  +L RLL + K Q   L + EQ+KE+D L+ S+   
Sbjct: 201  FMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELDALILSINHS 260

Query: 2135 VFEDNKKEKADLTNGPVVSL------HGSN-----------------VLEKACLVPEALD 2025
            +   N ++   +    VV L      H S+                 V  K+  + E   
Sbjct: 261  LVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVSIKSSGLKEQSV 320

Query: 2024 LPKLVLP--TRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMV-LPVS 1854
              + V P    SK +    PLLDLH D++ED+LPSPTR+  P+F   +  G+  + LP+ 
Sbjct: 321  SSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQTHGMVKLDLPIF 380

Query: 1853 SQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXX 1674
               +   N     +LHPY TDALKAVSSYQ KFG +S+  ++ LPSPTPSE+   G    
Sbjct: 381  PASLDKGNS----LLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEDDSGKGDT 436

Query: 1673 XXXXXXXXSCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHPVEQLNPMS---KPALKP 1503
                      +  A H           SS P TN             +P+S    P+L+ 
Sbjct: 437  GGEVTSFDVVH-NASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRS 495

Query: 1502 AL-KRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHKTDESVARDHMMKK 1326
            +  K RDPRL+   ++  + +    + + DL     + +  + K+   D S     + K+
Sbjct: 496  STAKSRDPRLRLATSDTVAQNTILPIPDIDLKLEASLEMIVSKKQKTVDLSAFDAPLPKR 555

Query: 1325 QRHKLTTS---REMETASGSG-WSEAKNVIPQPSFKIQ-VNENFQVDVRK----SGTAAA 1173
            QR + T S    ++  + G+G W E +     P         N   D+RK    + T A 
Sbjct: 556  QRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRKLEQVTATIAT 615

Query: 1172 VPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQLHQMEQQRIAAE 999
            +P        NF         P +  + + +L SLLK  A+NP+I + + + EQQ+ +A+
Sbjct: 616  IPSVIVNAAENF---------PVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQK-SAD 665

Query: 998  NQKKNAVSTSDSANVLSVNELPGTAASINSTPLKSKESGLNQPGISLIPSQMASSSTQPD 819
              + N    S S ++L    +P T A       +S   G    GI   P+  AS+    +
Sbjct: 666  ASRTNTAQASSSKSILGA--VPSTVA----VAPRSSAIGQRSVGILQTPTHTASAD---E 716

Query: 818  VARIRMKPRDPRRILHDSMVQKNDGVVYQQSKIDAAAS----------------DPQSSL 687
            VA +RMKPRDPRR+LH + V K   V   Q K   A +                D +S++
Sbjct: 717  VAIVRMKPRDPRRVLHSTAVLKGGSVGLDQCKTGVAGTHATISNLSFQSQEDQLDRKSAV 776

Query: 686  VRLAAP----LQLTKNLANVLXXXXXXXXXXXXXPCNNQPVASQADQVIVEAASGELNDS 519
                 P     Q TKNL N+                  Q +  QA Q   E        S
Sbjct: 777  TLSTTPPDIACQFTKNLKNIADMISVSPSTSPSVASQTQTLCIQAYQSRSEVKGAVSEPS 836

Query: 518  ETTSLLVSEVGSEKGTRQSANP---WGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFA 348
            E  +   + + SEKG+  S  P   WGDV+HLF+GY+D+Q+A IQ+ER+RR+ EQ KMF+
Sbjct: 837  EWVN--DAGLASEKGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERTRRLEEQKKMFS 894

Query: 347  ARKXXXXXXXXXXXLNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRP 168
             RK           LNSAKF+E+D  HE+ILR+KEEQD+E   RHLFRF HMGMWTKLRP
Sbjct: 895  VRKLCLVLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPYRHLFRFPHMGMWTKLRP 954

Query: 167  GIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFD 3
            GIWNFLEKASNL+ELHLYTMGNKLYATEMAK+LDP G LFAGRVIS+GDD D FD
Sbjct: 955  GIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFD 1009