BLASTX nr result

ID: Zingiber24_contig00015752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00015752
         (735 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004957383.1| PREDICTED: DNA polymerase delta subunit 4-li...   106   7e-21
ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-li...   106   9e-21
ref|XP_003578452.1| PREDICTED: DNA polymerase delta subunit 4-li...   105   2e-20
ref|NP_001136678.1| delta DNA polymerase isoform 1 [Zea mays] gi...   105   2e-20
ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606...   104   3e-20
dbj|BAK00382.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   2e-19
ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608...   101   2e-19
ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citr...   101   2e-19
ref|NP_001063696.1| Os09g0520100 [Oryza sativa Japonica Group] g...   101   3e-19
gb|EMS48027.1| DNA polymerase delta subunit 4 [Triticum urartu]       100   4e-19
ref|XP_006660853.1| PREDICTED: uncharacterized protein LOC102712...   100   5e-19
ref|XP_002462682.1| hypothetical protein SORBIDRAFT_02g030140 [S...   100   5e-19
gb|EMT03784.1| DNA polymerase delta subunit 4 [Aegilops tauschii]     100   7e-19
ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-li...    99   1e-18
ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Caps...    99   1e-18
ref|XP_004239870.1| PREDICTED: uncharacterized protein LOC101262...    99   1e-18
ref|XP_002319772.1| DNA polymerase delta subunit 4 family protei...    99   1e-18
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...    98   2e-18
ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutr...    98   3e-18
gb|EXB29122.1| DNA polymerase delta subunit 4 [Morus notabilis]        97   7e-18

>ref|XP_004957383.1| PREDICTED: DNA polymerase delta subunit 4-like [Setaria italica]
          Length = 131

 Score =  106 bits (265), Expect = 7e-21
 Identities = 65/144 (45%), Positives = 83/144 (57%), Gaps = 18/144 (12%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSNR----------SFAGKSPTVSLSHLVDPVPSPLHGS 571
           MASSG+K+FYRQKKKGGV K SS+           +  G   T   S LV       HGS
Sbjct: 1   MASSGMKDFYRQKKKGGVTKASSSSKKKTQQYTGGASVGAPDTAQTSALVS------HGS 54

Query: 570 GAGRDKVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETIL 391
              +D        G++E E+LRQFDMD ++GPCIG+SR  RWERA+AMGL PPA +  +L
Sbjct: 55  WDLKDD------FGDQE-EQLRQFDMDTKFGPCIGVSRLQRWERASAMGLQPPAHLRDLL 107

Query: 390 LK--------SSAAASGCLWDGRV 343
           L+         S  +  CLW+G+V
Sbjct: 108 LRIPSTKNRSDSTPSVECLWEGKV 131


>ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum
           lycopersicum]
          Length = 120

 Score =  106 bits (264), Expect = 9e-21
 Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
 Frame = -1

Query: 717 ASSGLKNFYRQKKK-GGVAKRSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDKVPLA 541
           + S +K FY+Q+KK GG+ K S ++S   K+     S++  P     HGS   +D     
Sbjct: 3   SKSSMKGFYKQQKKSGGITKPSKSKSTKPKNAAAIGSNVTQPSALISHGSLDLKDNY--- 59

Query: 540 AGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAASGC 361
               ++ +E LRQFDM+M YGPC+G++R DRWERA  +G+NPPA+VE  LL+S+   + C
Sbjct: 60  ----DQNEEVLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPADVER-LLRSNKVRNEC 114

Query: 360 LWDGRV 343
           LWDGRV
Sbjct: 115 LWDGRV 120


>ref|XP_003578452.1| PREDICTED: DNA polymerase delta subunit 4-like [Brachypodium
           distachyon]
          Length = 131

 Score =  105 bits (261), Expect = 2e-20
 Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 13/139 (9%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSS-----NRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRD 556
           MASSG+K+FYRQKKKGG+ K SS      + + G + +V  S+         HGS   +D
Sbjct: 1   MASSGVKDFYRQKKKGGITKTSSCSKKKTQQYTGGA-SVGASNPAQTSALISHGSLDLKD 59

Query: 555 KVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSS- 379
            +        E++E+LRQFDMDM++GPCIG++R  RWERA+AMGL PP+ +  +L  S+ 
Sbjct: 60  DI-------SEQEEQLRQFDMDMKFGPCIGVNRLQRWERASAMGLQPPSHLRDLLAHSAS 112

Query: 378 -------AAASGCLWDGRV 343
                  + +  CLW+G++
Sbjct: 113 MNNHNNGSPSPECLWEGKI 131


>ref|NP_001136678.1| delta DNA polymerase isoform 1 [Zea mays]
           gi|194696604|gb|ACF82386.1| unknown [Zea mays]
           gi|223942961|gb|ACN25564.1| unknown [Zea mays]
           gi|414886275|tpg|DAA62289.1| TPA: delta DNA polymerase
           isoform 1 [Zea mays] gi|414886276|tpg|DAA62290.1| TPA:
           delta DNA polymerase isoform 2 [Zea mays]
           gi|414886277|tpg|DAA62291.1| TPA: delta DNA polymerase
           isoform 3 [Zea mays]
          Length = 131

 Score =  105 bits (261), Expect = 2e-20
 Identities = 61/139 (43%), Positives = 86/139 (61%), Gaps = 13/139 (9%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSN-----RSFAGKSPTVSLSHLVDPVPSPLHGSGAGRD 556
           M+S G+K+FYRQKKKGGVAK +S+     R + G + +V  S          HGS   +D
Sbjct: 1   MSSGGVKDFYRQKKKGGVAKTASSSKNKTRHYTGGA-SVGASDAAQTSALVSHGSWDLKD 59

Query: 555 KVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSA 376
                   G+EE E+LRQFD+DM++GPCIG++R  RWERA+AMGL PPA +  +LL +++
Sbjct: 60  D------FGDEE-EQLRQFDVDMKFGPCIGVTRLQRWERASAMGLQPPAHLRDLLLHAAS 112

Query: 375 AAS--------GCLWDGRV 343
             +         CLW+G+V
Sbjct: 113 TKNRGGGSPSVECLWEGKV 131


>ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606360 [Solanum tuberosum]
          Length = 120

 Score =  104 bits (260), Expect = 3e-20
 Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
 Frame = -1

Query: 717 ASSGLKNFYRQKKK-GGVAKRSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDKVPLA 541
           + S +K FY+Q+KK GG+ K S ++S   K+     S++  P     HGS   +D     
Sbjct: 3   SKSSMKGFYKQQKKSGGITKPSKSKSTKPKNAAAIGSNVTQPPALISHGSLDLKDSY--- 59

Query: 540 AGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAASGC 361
               ++ +E LRQFDM+M YGPC+G++R DRWERA  +G+NPP +VE  LL+S+   + C
Sbjct: 60  ----DQNEEVLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPTDVER-LLRSNKVRNEC 114

Query: 360 LWDGRV 343
           LWDGRV
Sbjct: 115 LWDGRV 120


>dbj|BAK00382.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 131

 Score =  102 bits (253), Expect = 2e-19
 Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 13/139 (9%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSN-----RSFAGKSPTVSLSHLVDPVPSPLHGSGAGRD 556
           MAS+G+K+FYRQKKKGG  K S++     +++ G + +V  S+         HGS   +D
Sbjct: 1   MASTGVKDFYRQKKKGGAGKTSASSKKKPQNYTGGA-SVGASNKAQTAALISHGSFDLKD 59

Query: 555 KVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSA 376
                     E++E+LRQFDMDM++GPCIG++R  RWERA+AMGL PP  +  +L ++++
Sbjct: 60  DF-------SEQEEQLRQFDMDMKFGPCIGVNRLQRWERASAMGLQPPPHLRDLLARAAS 112

Query: 375 A--------ASGCLWDGRV 343
                    +  CLW+G++
Sbjct: 113 GNNRNNGGPSPECLWEGKI 131


>ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608934 [Citrus sinensis]
          Length = 122

 Score =  101 bits (252), Expect = 2e-19
 Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
 Frame = -1

Query: 717 ASSGLKNFYRQKKK-GGVAKRSSNRSFAGKSPTVSL---SHLVDPVPSPLHGSGAGRDKV 550
           + + +K FYRQKKK GG+ K++SN+    K+P +S    S +  P     HGS   +   
Sbjct: 6   SKNNMKGFYRQKKKAGGITKKTSNK----KTPKISATFGSDVTQPTALISHGSLDLK--- 58

Query: 549 PLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAA 370
               G  ++ +E LRQFDM+M YGPCIG+SR  RWERA  +GLNPP E+E +LLK+    
Sbjct: 59  ----GDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLGLNPPKEIE-VLLKTRKVQ 113

Query: 369 SGCLWDGRV 343
           + CLW+ RV
Sbjct: 114 AECLWEDRV 122


>ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citrus clementina]
           gi|557539593|gb|ESR50637.1| hypothetical protein
           CICLE_v10033086mg [Citrus clementina]
          Length = 122

 Score =  101 bits (252), Expect = 2e-19
 Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
 Frame = -1

Query: 717 ASSGLKNFYRQKKK-GGVAKRSSNRSFAGKSPTVSL---SHLVDPVPSPLHGSGAGRDKV 550
           + + +K FYRQKKK GG+ K++SN+    K+P +S    S +  P     HGS   +   
Sbjct: 6   SKNNMKGFYRQKKKTGGITKKTSNK----KTPKISATFGSDVTQPTALISHGSLDLK--- 58

Query: 549 PLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAA 370
               G  ++ +E LRQFDM+M YGPCIG+SR  RWERA  +GLNPP E+E +LLK+    
Sbjct: 59  ----GDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLGLNPPKEIE-VLLKTRKVQ 113

Query: 369 SGCLWDGRV 343
           + CLW+ RV
Sbjct: 114 AECLWEDRV 122


>ref|NP_001063696.1| Os09g0520100 [Oryza sativa Japonica Group]
           gi|52075585|dbj|BAD46695.1| unknown protein [Oryza
           sativa Japonica Group] gi|52076158|dbj|BAD46671.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113631929|dbj|BAF25610.1| Os09g0520100 [Oryza sativa
           Japonica Group] gi|125564401|gb|EAZ09781.1| hypothetical
           protein OsI_32069 [Oryza sativa Indica Group]
           gi|125606356|gb|EAZ45392.1| hypothetical protein
           OsJ_30041 [Oryza sativa Japonica Group]
           gi|215767511|dbj|BAG99739.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 131

 Score =  101 bits (251), Expect = 3e-19
 Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 18/144 (12%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSNR----------SFAGKSPTVSLSHLVDPVPSPLHGS 571
           MAS G+K+FYRQKKKGG  K SS+           +  G S T   S L+       HG+
Sbjct: 1   MASGGMKDFYRQKKKGGPTKASSSSKKKTQHYTGGASVGASDTAQTSALIS------HGN 54

Query: 570 GAGRDKVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETIL 391
              +D          E++E+LR FDMDM++GPCIG++R  RWERA+AMGL+PP  +  +L
Sbjct: 55  LDLKDDF-------SEQEEQLRLFDMDMKFGPCIGVTRLQRWERASAMGLHPPPHLRDLL 107

Query: 390 LKSSAAAS--------GCLWDGRV 343
           L ++ A +         CLW+G+V
Sbjct: 108 LNNTHAGNHNNNGPSLECLWEGKV 131


>gb|EMS48027.1| DNA polymerase delta subunit 4 [Triticum urartu]
          Length = 159

 Score =  100 bits (250), Expect = 4e-19
 Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSN-----RSFAGKSPTVSLSHLVDPVPSPLHGSGAGRD 556
           MAS+G+K+FYRQKKKGG  K S++     +++ G + +V  S+         HGS   +D
Sbjct: 1   MASTGVKDFYRQKKKGGAGKTSASSKKKTQNYTGGA-SVGASNKAQTAALISHGSLDLKD 59

Query: 555 KVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSA 376
                     E++E+LRQFDMDM++GPCIG++R  RWERA+AMGL PP  +  +L ++S+
Sbjct: 60  DF-------SEQEEQLRQFDMDMKFGPCIGVNRLQRWERASAMGLQPPPHLHDLLARASS 112

Query: 375 A--------ASGCLWDG 349
                    +  CLW+G
Sbjct: 113 GNNRNNGGPSPECLWEG 129


>ref|XP_006660853.1| PREDICTED: uncharacterized protein LOC102712469 [Oryza brachyantha]
          Length = 131

 Score =  100 bits (249), Expect = 5e-19
 Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 18/144 (12%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSNR----------SFAGKSPTVSLSHLVDPVPSPLHGS 571
           MASSG+K FYRQKKKGG  K SS+           +  G S T   S L+       HG+
Sbjct: 1   MASSGMKEFYRQKKKGGPTKASSSSKKKTQHYTGGASVGASDTAQTSALIS------HGT 54

Query: 570 GAGRDKVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETIL 391
              +D          E++E+LR FDMD ++GPCIG++R  RWERA+AMGL+PP  +  +L
Sbjct: 55  VDLKDDF-------SEQEEQLRLFDMDPKFGPCIGVTRLQRWERASAMGLHPPPHLRDLL 107

Query: 390 LKSSAA--------ASGCLWDGRV 343
           L +++A        +  CLW+G+V
Sbjct: 108 LNNASASIRNNNGPSLECLWEGKV 131


>ref|XP_002462682.1| hypothetical protein SORBIDRAFT_02g030140 [Sorghum bicolor]
           gi|241926059|gb|EER99203.1| hypothetical protein
           SORBIDRAFT_02g030140 [Sorghum bicolor]
          Length = 131

 Score =  100 bits (249), Expect = 5e-19
 Identities = 60/144 (41%), Positives = 83/144 (57%), Gaps = 18/144 (12%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSNR----------SFAGKSPTVSLSHLVDPVPSPLHGS 571
           M+S G+K+FYRQKKKGGV K +++           +  G   T   S LV       HGS
Sbjct: 1   MSSGGVKDFYRQKKKGGVTKAAASSKKKTQQYTGGASVGAPDTAQTSALVS------HGS 54

Query: 570 GAGRDKVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETIL 391
              +D        G++E E+LRQFDMDM++GPCIG++R  RWERA+AMGL+PPA +  +L
Sbjct: 55  WDLKDD------FGDQE-EQLRQFDMDMKFGPCIGVTRLQRWERASAMGLHPPAHLRDLL 107

Query: 390 LKSSAAAS--------GCLWDGRV 343
           L + +  +         CLW+G V
Sbjct: 108 LHAPSTKNRSDGSPSVECLWEGNV 131


>gb|EMT03784.1| DNA polymerase delta subunit 4 [Aegilops tauschii]
          Length = 162

 Score =  100 bits (248), Expect = 7e-19
 Identities = 56/136 (41%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKKGGVAKRSSN-----RSFAGKSPTVSLSHLVDPVPSPLHGSGAGRD 556
           MAS+G+K+FYRQKKKGGV K S++     +++ G + +V  S+         HGS   +D
Sbjct: 1   MASTGVKDFYRQKKKGGVGKTSASSKKKTQNYTGGA-SVGASNKAQTAALISHGSLDLKD 59

Query: 555 KVPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSA 376
                     E++E+LRQFDMDM++GPCIG++R  RWERA+AMGL PP  +  +L ++S+
Sbjct: 60  DF-------SEQEEQLRQFDMDMKFGPCIGVNRLQRWERASAMGLQPPPHLRDLLARASS 112

Query: 375 A--------ASGCLWD 352
                    +  CLW+
Sbjct: 113 GNNRNNGGPSPECLWE 128


>ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum tuberosum]
          Length = 133

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 58/133 (43%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
 Frame = -1

Query: 717 ASSGLKNFYRQ-KKKGGVAKRSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDKVPLA 541
           + S +K FYRQ KK GG+ K   ++S    + T +    V P  +    S   R    ++
Sbjct: 3   SKSDMKGFYRQTKKNGGITKPIHSKSSLAATTTTTKKS-VTPKLAAARSSNITRSPALIS 61

Query: 540 AGIGE-------EEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKS 382
            G  +       E +E LRQFDM+M YGPC+GLSR DRWERA + GLNPP +VE I L+S
Sbjct: 62  HGSPDLQDDDYDENEELLRQFDMNMTYGPCLGLSRLDRWERAKSFGLNPPRDVEPI-LRS 120

Query: 381 SAAASGCLWDGRV 343
           S   + CLWDG V
Sbjct: 121 SKVRNECLWDGMV 133


>ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Capsella rubella]
           gi|482573010|gb|EOA37197.1| hypothetical protein
           CARUB_v10010654mg [Capsella rubella]
          Length = 124

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 56/128 (43%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
 Frame = -1

Query: 714 SSGLKNFYRQKKK---GGVAK-RSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDKVP 547
           +  +K FY+Q K    GG++K + S+R  A K      S +  P     HGS      + 
Sbjct: 5   AKNMKGFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALISHGS------ID 58

Query: 546 LAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAAS 367
           L    G+EE E LRQFDMD+ YGPC+G++R DRWERA  +G+NPP E+E  LLK+     
Sbjct: 59  LNGDYGKEE-EMLRQFDMDIAYGPCLGMTRLDRWERALRLGMNPPNEIEK-LLKTGKVQQ 116

Query: 366 GCLWDGRV 343
            CLW GRV
Sbjct: 117 DCLWQGRV 124


>ref|XP_004239870.1| PREDICTED: uncharacterized protein LOC101262116 [Solanum
           lycopersicum]
          Length = 130

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 61/135 (45%), Positives = 79/135 (58%), Gaps = 9/135 (6%)
 Frame = -1

Query: 720 MAS-SGLKNFYRQ-KKKGGVAKRSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDKVP 547
           MAS S +K FY+Q KK GG+AK + ++S    + T   +  V P  +P  GS   R    
Sbjct: 1   MASRSDMKGFYKQTKKNGGIAKPTHSKSSLVATTT---NKSVTPKLAPARGSNITRSPAL 57

Query: 546 LAAGIGE-------EEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILL 388
           ++ G  +       E +E LRQFD +M YGPC+GLSR DRWERA + GLNPP +VE IL 
Sbjct: 58  ISHGSPDLQADGYDENEELLRQFDTNMTYGPCLGLSRLDRWERAKSFGLNPPTDVEPIL- 116

Query: 387 KSSAAASGCLWDGRV 343
             S   + CLWDG V
Sbjct: 117 -RSKVRNECLWDGMV 130


>ref|XP_002319772.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
           gi|118488437|gb|ABK96033.1| unknown [Populus
           trichocarpa] gi|222858148|gb|EEE95695.1| DNA polymerase
           delta subunit 4 family protein [Populus trichocarpa]
          Length = 122

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 57/127 (44%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
 Frame = -1

Query: 717 ASSGLKNFYRQKKK--GGVAKRSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDKVPL 544
           ASS +K FYRQKK    G+ K +S++  +        S +  P     HGS   +D    
Sbjct: 4   ASSNMKGFYRQKKNKNSGITKPTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDYY-- 61

Query: 543 AAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAASG 364
                +E +E LRQFDM+M YGPC+G+SR  RWERA  +GLNPP E E  LLK+    S 
Sbjct: 62  -----DEHEELLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEG-LLKAEMVQSE 115

Query: 363 CLWDGRV 343
           C WDGRV
Sbjct: 116 CWWDGRV 122


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
 Frame = -1

Query: 720 MASSGLKNFYRQKKK---GGVAK-RSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDK 553
           MA+  LK FY+Q K    GG++K + S+R    K      S ++ P     HGS    + 
Sbjct: 1   MATKNLKGFYKQTKSNITGGISKSKPSSRKVTPKHAAAQGSDVIQPAALISHGSLDLNED 60

Query: 552 VPLAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAA 373
                   ++E+E LRQFDM++ YGPC+G++R DRWERA  +G+NPP E+E  LLK+   
Sbjct: 61  Y-------DKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEK-LLKTGKV 112

Query: 372 ASGCLWDGRV 343
              CLW GRV
Sbjct: 113 QQDCLWQGRV 122


>ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutrema salsugineum]
           gi|557095301|gb|ESQ35883.1| hypothetical protein
           EUTSA_v10009118mg [Eutrema salsugineum]
          Length = 124

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
 Frame = -1

Query: 714 SSGLKNFYRQKKK---GGVAK-RSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAGRDKVP 547
           +  LK FY+Q K+   GG++K + S+R    K      S    P     HGS    D   
Sbjct: 5   AKNLKGFYKQTKRNITGGISKSKPSSRKVTPKHAATQGSDATQPAALISHGSLDLNDAY- 63

Query: 546 LAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAAS 367
                 ++E+E LRQFDM+M YGPC+G++R DRWERA  +G+NPP+E+E  LLK+     
Sbjct: 64  ------DKEEEMLRQFDMNMAYGPCLGMTRLDRWERALRLGMNPPSEIER-LLKTEKVQQ 116

Query: 366 GCLWDGRV 343
            CLW GRV
Sbjct: 117 DCLWQGRV 124


>gb|EXB29122.1| DNA polymerase delta subunit 4 [Morus notabilis]
          Length = 122

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
 Frame = -1

Query: 714 SSGLKNFYRQKK---KGGVAKRSSNRSFAGKSPTVSLSHLVDPVPSPLHGSGAG-RDKVP 547
           S  +K FY+QKK   K G+      +S    S   +L   +   P+ L  S    RD+  
Sbjct: 5   SGNIKGFYKQKKTTTKTGITGTGIKKS---PSSAATLGSDITQPPALLSNSSPDLRDEY- 60

Query: 546 LAAGIGEEEDEKLRQFDMDMRYGPCIGLSRTDRWERAAAMGLNPPAEVETILLKSSAAAS 367
                 ++E+E LRQFDM+M YGPC+G+SR  RWERA+ +GLNPP +V  +LLK+  A S
Sbjct: 61  ------DKEEEVLRQFDMNMAYGPCLGMSRLTRWERASVLGLNPPQQVHHLLLKAPTARS 114

Query: 366 GCLWDGRV 343
            CLW+GR+
Sbjct: 115 HCLWEGRI 122


Top