BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00015565
         (275 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]    81   2e-13
emb|CAN74489.1| hypothetical protein VITISV_029273 [Vitis vinifera]    81   2e-13
ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Popu...    80   2e-13
ref|XP_002308772.1| predicted protein [Populus trichocarpa]            80   2e-13
ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citr...    80   4e-13
ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...    79   8e-13
ref|XP_006878662.1| hypothetical protein AMTR_s00011p00266560 [A...    77   2e-12
ref|XP_006878493.1| hypothetical protein AMTR_s00011p00195950 [A...    77   3e-12
ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containi...    76   5e-12
ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11
ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [S...    73   4e-11
ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
emb|CBI32698.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat...    71   1e-10

>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/79 (53%), Positives = 53/79 (67%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA +RNWE+ D             E GSSWIE+A  M+ F SKD+ HP++D
Sbjct: 724 GYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSD 783

Query: 92  QIYGMLQGLALEMKSPGYK 36
           QIY ML+ L +EMK  GY+
Sbjct: 784 QIYSMLEELLMEMKHAGYR 802


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/79 (53%), Positives = 53/79 (67%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA +RNWE+ D             E GSSWIE+A  M+ F SKD+ HP++D
Sbjct: 700 GYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSD 759

Query: 92  QIYGMLQGLALEMKSPGYK 36
           QIY ML+ L +EMK  GY+
Sbjct: 760 QIYSMLEELLMEMKHAGYR 778


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA++ NW++ D             E G SW+EVA  ++ FMS+D  HP+  
Sbjct: 732 GYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCA 791

Query: 92  QIYGMLQGLALEMKSPGYK 36
           +IY ML+ LA+EMK  GYK
Sbjct: 792 EIYQMLEKLAMEMKDAGYK 810


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA++ NW++ D             E G SW+EVA  ++ FMS+D  HP+  
Sbjct: 732 GYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCA 791

Query: 92  QIYGMLQGLALEMKSPGYK 36
           +IY ML+ LA+EMK  GYK
Sbjct: 792 EIYQMLEKLAMEMKDAGYK 810


>emb|CAN74489.1| hypothetical protein VITISV_029273 [Vitis vinifera]
          Length = 102

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA++ NW++ D             E G SW+EVA  ++ FMS+D  HP+  
Sbjct: 9   GYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCA 68

Query: 92  QIYGMLQGLALEMKSPGYK 36
           +IY ML+ LA+EMK  GYK
Sbjct: 69  EIYQMLEKLAMEMKDAGYK 87


>ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Populus trichocarpa]
           gi|550335185|gb|EEE92296.2| hypothetical protein
           POPTR_0006s00960g [Populus trichocarpa]
          Length = 820

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/74 (52%), Positives = 48/74 (64%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA + NW + D             E GSSWI++  S+ RF SKDQ HP +D
Sbjct: 737 GYHVLLSNIYAEEGNWVNVDKVRREMREKGLQKEVGSSWIDIGGSVARFTSKDQDHPHSD 796

Query: 92  QIYGMLQGLALEMK 51
           +IY ML GLA+EMK
Sbjct: 797 KIYEMLAGLAMEMK 810


>ref|XP_002308772.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/74 (52%), Positives = 48/74 (64%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA + NW + D             E GSSWI++  S+ RF SKDQ HP +D
Sbjct: 237 GYHVLLSNIYAEEGNWVNVDKVRREMREKGLQKEVGSSWIDIGGSVARFTSKDQDHPHSD 296

Query: 92  QIYGMLQGLALEMK 51
           +IY ML GLA+EMK
Sbjct: 297 KIYEMLAGLAMEMK 310


>ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citrus clementina]
           gi|557531841|gb|ESR43024.1| hypothetical protein
           CICLE_v10011066mg [Citrus clementina]
          Length = 833

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA + NWE+ D             E G SWI+V   ++RF SKDQ HP++ 
Sbjct: 740 GYHVLLSNIYAEEGNWENVDKVRKEMREGGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 799

Query: 92  QIYGMLQGLALEMKSPGYK 36
           +IY ML+ LA+EM++ G K
Sbjct: 800 EIYEMLERLAMEMRNAGNK 818


>ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Citrus sinensis]
          Length = 833

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YA + NWE+ D             E G SWI+V   ++RF SKDQ HP++ 
Sbjct: 740 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 799

Query: 92  QIYGMLQGLALEMKSPGYK 36
           +IY ML+ LA+EM++ G K
Sbjct: 800 KIYEMLERLAMEMRNAGNK 818


>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/87 (43%), Positives = 54/87 (62%)
 Frame = -1

Query: 275 AGYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEN 96
           AGYHVLLSN+YA +  WE  D             E G SW+E+A  ++ F+S+D+ HP++
Sbjct: 734 AGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKHPQS 793

Query: 95  DQIYGMLQGLALEMKSPGYKIPEFHLD 15
            +IY ML  L L+MK  GYK P++ L+
Sbjct: 794 SEIYYMLDMLTLDMKYAGYK-PQYSLN 819


>ref|XP_006878662.1| hypothetical protein AMTR_s00011p00266560 [Amborella trichopoda]
            gi|548832005|gb|ERM94807.1| hypothetical protein
            AMTR_s00011p00266560 [Amborella trichopoda]
          Length = 993

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/77 (49%), Positives = 47/77 (61%)
 Frame = -1

Query: 272  GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
            GYHVLLSN+YA    WES D             EPG SWIEV   +H F++KDQ HP++D
Sbjct: 916  GYHVLLSNMYALKGRWESVDMVRRGIKEMGLKKEPGCSWIEVGGWVHLFVAKDQKHPQSD 975

Query: 92   QIYGMLQGLALEMKSPG 42
            +IYG L+ L  EM+  G
Sbjct: 976  EIYGKLRDLDAEMRLLG 992


>ref|XP_006878493.1| hypothetical protein AMTR_s00011p00195950 [Amborella trichopoda]
           gi|548831836|gb|ERM94638.1| hypothetical protein
           AMTR_s00011p00195950 [Amborella trichopoda]
          Length = 214

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/77 (48%), Positives = 47/77 (61%)
 Frame = -1

Query: 272 GYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEND 93
           GYHVLLSN+YAS   WES D             EPG SWIEV   +H F++KDQ HP++D
Sbjct: 137 GYHVLLSNMYASKGRWESVDMVRRGIKEMGLKKEPGCSWIEVGGCVHLFVAKDQKHPQSD 196

Query: 92  QIYGMLQGLALEMKSPG 42
           +IY  L+ L  +M+  G
Sbjct: 197 EIYAKLRDLDADMRLLG 213


>ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Glycine max]
          Length = 752

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 34/80 (42%), Positives = 50/80 (62%)
 Frame = -1

Query: 275 AGYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEN 96
           AGYHVLLSN+YA +  WE+ D             E G SW+E+A  ++ F+S+D+ HP++
Sbjct: 658 AGYHVLLSNIYAEEGEWENVDRVRNQMKEKGLQKEMGCSWVEIAGCVNFFVSRDEKHPQS 717

Query: 95  DQIYGMLQGLALEMKSPGYK 36
            +IY +L  L ++MK  GYK
Sbjct: 718 GEIYYILDKLTMDMKDAGYK 737


>ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Solanum lycopersicum]
          Length = 835

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = -1

Query: 275  AGYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEN 96
            +GYHVLLSN+YA + NW+S D             E G SWI+ +   H F+SKD+ HP+ 
Sbjct: 741  SGYHVLLSNIYAEEGNWQSVDDVRRGMRKMGLSKEIGCSWIDTSGYPHCFVSKDKKHPQF 800

Query: 95   DQIYGMLQGLALEMKSPGYKIPEFHLDE 12
              IY ML+ L + MK  GYK P+  L E
Sbjct: 801  CMIYDMLEYLTINMKDVGYK-PKLELIE 827


>ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
           gi|241925606|gb|EER98750.1| hypothetical protein
           SORBIDRAFT_02g022150 [Sorghum bicolor]
          Length = 686

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/79 (43%), Positives = 42/79 (53%)
 Frame = -1

Query: 275 AGYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEN 96
           AG +VLLSN+YAS   W   D              PG SWIEV + +H F   D +HPE 
Sbjct: 535 AGMYVLLSNIYASSGKWRDVDKMRLMMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPER 594

Query: 95  DQIYGMLQGLALEMKSPGY 39
           + IYG L+ L + MK  GY
Sbjct: 595 EDIYGFLEDLDIRMKKAGY 613


>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum tuberosum]
          Length = 889

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = -1

Query: 275 AGYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEN 96
           A ++VLLSN+Y+S   WE A+             EPG SWIE  D +H+F++ D  HP++
Sbjct: 720 ASHYVLLSNIYSSAGIWEKANMVRRNMKKVGVRKEPGCSWIEFGDEVHKFVAGDASHPQS 779

Query: 95  DQIYGMLQGLALEMKSPGY 39
           +Q+YG L+ L+ +MK  GY
Sbjct: 780 EQLYGYLETLSEKMKKEGY 798


>ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum lycopersicum]
          Length = 889

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = -1

Query: 275 AGYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEN 96
           A ++VLLSN+Y+S   WE A+             EPG SWIE  D +H+F++ D  HP++
Sbjct: 720 ASHYVLLSNIYSSAGIWEKANMVRRNMKKVGVRKEPGCSWIEFGDEVHKFVAGDASHPQS 779

Query: 95  DQIYGMLQGLALEMKSPGY 39
           +Q+YG L+ L+ +MK  GY
Sbjct: 780 EQLYGYLETLSEKMKKEGY 798


>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/76 (44%), Positives = 42/76 (55%)
 Frame = -1

Query: 266 HVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPENDQI 87
           HVLL N+YAS  NWE                 PG SWIEV D +H F  +D +HPE ++I
Sbjct: 675 HVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKI 734

Query: 86  YGMLQGLALEMKSPGY 39
           Y ML+ L L+M   GY
Sbjct: 735 YTMLEELLLQMLDAGY 750


>emb|CBI32698.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/76 (44%), Positives = 42/76 (55%)
 Frame = -1

Query: 266 HVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPENDQI 87
           HVLL N+YAS  NWE                 PG SWIEV D +H F  +D +HPE ++I
Sbjct: 413 HVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKI 472

Query: 86  YGMLQGLALEMKSPGY 39
           Y ML+ L L+M   GY
Sbjct: 473 YTMLEELLLQMLDAGY 488


>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like isoform X1 [Glycine max]
           gi|571454638|ref|XP_006579856.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g01580-like isoform X2 [Glycine max]
          Length = 700

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/82 (40%), Positives = 45/82 (54%)
 Frame = -1

Query: 275 AGYHVLLSNVYASDRNWESADXXXXXXXXXXXXXEPGSSWIEVADSMHRFMSKDQMHPEN 96
           AGY+ LLSN+Y  D+NW  A                G S +E+ + +H F++ D+ H E+
Sbjct: 613 AGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGES 672

Query: 95  DQIYGMLQGLALEMKSPGYKIP 30
           DQIYGML+ L   MK  GY  P
Sbjct: 673 DQIYGMLRKLDARMKEEGYDPP 694