BLASTX nr result

ID: Zingiber24_contig00015533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00015533
         (270 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006859059.1| hypothetical protein AMTR_s00068p00196240 [A...    89   8e-16
ref|XP_002268572.1| PREDICTED: uncharacterized protein LOC100258...    69   8e-10
emb|CAN75541.1| hypothetical protein VITISV_005095 [Vitis vinifera]    69   8e-10
ref|XP_004488615.1| PREDICTED: YTH domain family protein 2-like ...    68   1e-09
ref|XP_004488614.1| PREDICTED: YTH domain family protein 2-like ...    68   1e-09
gb|ADE75755.1| unknown [Picea sitchensis]                              68   1e-09
ref|XP_006378617.1| hypothetical protein POPTR_0010s18300g [Popu...    67   2e-09
ref|XP_006378616.1| hypothetical protein POPTR_0010s18300g [Popu...    67   2e-09
ref|XP_006585386.1| PREDICTED: YTH domain family protein 2 isofo...    64   2e-08
ref|XP_003531473.1| PREDICTED: YTH domain family protein 2 isofo...    64   2e-08
ref|XP_003595920.1| YTH domain family protein [Medicago truncatu...    64   2e-08
ref|XP_003595919.1| YTH domain family protein [Medicago truncatu...    64   2e-08
gb|EMJ15149.1| hypothetical protein PRUPE_ppa003664mg [Prunus pe...    64   3e-08
ref|XP_002518823.1| yth domain-containing protein, putative [Ric...    62   6e-08
ref|XP_006598229.1| PREDICTED: YTH domain family protein 1-like ...    62   8e-08
ref|XP_003546840.1| PREDICTED: YTH domain family protein 1-like ...    62   8e-08
ref|XP_004969542.1| PREDICTED: uncharacterized protein LOC101780...    62   1e-07
gb|ESW21144.1| hypothetical protein PHAVU_005G045600g [Phaseolus...    61   2e-07
ref|XP_002311277.2| hypothetical protein POPTR_0008s08030g [Popu...    58   1e-06
ref|XP_004293799.1| PREDICTED: uncharacterized protein LOC101301...    58   1e-06

>ref|XP_006859059.1| hypothetical protein AMTR_s00068p00196240 [Amborella trichopoda]
           gi|548863171|gb|ERN20526.1| hypothetical protein
           AMTR_s00068p00196240 [Amborella trichopoda]
          Length = 595

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/81 (51%), Positives = 52/81 (64%)
 Frame = +3

Query: 9   TAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLD 188
           TAVL KGY PL KF AY+N   G + YPNS +  K+N R W   E+ K+R K N F+D D
Sbjct: 266 TAVLAKGYFPLPKFPAYSNNGKGGVLYPNSPMNFKQNGRNWASAERFKSRGKGNGFSDFD 325

Query: 189 LLNERNRGPRTNSIKTTNSGD 251
           +LNE+NRGPRT  I   +  D
Sbjct: 326 VLNEQNRGPRTKGISEKSESD 346


>ref|XP_002268572.1| PREDICTED: uncharacterized protein LOC100258644 [Vitis vinifera]
           gi|297736091|emb|CBI24129.3| unnamed protein product
           [Vitis vinifera]
          Length = 591

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 37/76 (48%), Positives = 47/76 (61%)
 Frame = +3

Query: 6   PTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADL 185
           P   L K Y P+ K  +Y NQ  G L YPNS + +K N+R WV  EKLK R+K N+ +D 
Sbjct: 261 PDDALGKDYFPIAKLQSY-NQGKGGLLYPNSPVNLKANSRGWVSTEKLKMRSKANAISDF 319

Query: 186 DLLNERNRGPRTNSIK 233
            +L E+N GPRT S K
Sbjct: 320 GVL-EQNHGPRTASAK 334


>emb|CAN75541.1| hypothetical protein VITISV_005095 [Vitis vinifera]
          Length = 592

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 37/76 (48%), Positives = 47/76 (61%)
 Frame = +3

Query: 6   PTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADL 185
           P   L K Y P+ K  +Y NQ  G L YPNS + +K N+R WV  EKLK R+K N+ +D 
Sbjct: 247 PDDALGKDYFPIAKLQSY-NQGKGGLLYPNSPVNLKANSRGWVSTEKLKMRSKANAISDF 305

Query: 186 DLLNERNRGPRTNSIK 233
            +L E+N GPRT S K
Sbjct: 306 GVL-EQNHGPRTASAK 320


>ref|XP_004488615.1| PREDICTED: YTH domain family protein 2-like isoform X2 [Cicer
           arietinum]
          Length = 505

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = +3

Query: 18  LPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDLLN 197
           + KG  P+ KFS Y NQ      YPN+   +K NT+ WV  EKLK R+K+N     D LN
Sbjct: 190 MAKGSFPVAKFSTY-NQGKSGFPYPNNFPNVKANTKGWVSTEKLKLRSKVN-----DSLN 243

Query: 198 ERNRGPRTNSIK-TTNSGDNFQETL 269
           E+N+GPRT + K   NSGDN   T+
Sbjct: 244 EQNQGPRTANTKGALNSGDNSATTV 268


>ref|XP_004488614.1| PREDICTED: YTH domain family protein 2-like isoform X1 [Cicer
           arietinum]
          Length = 586

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = +3

Query: 18  LPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDLLN 197
           + KG  P+ KFS Y NQ      YPN+   +K NT+ WV  EKLK R+K+N     D LN
Sbjct: 271 MAKGSFPVAKFSTY-NQGKSGFPYPNNFPNVKANTKGWVSTEKLKLRSKVN-----DSLN 324

Query: 198 ERNRGPRTNSIK-TTNSGDNFQETL 269
           E+N+GPRT + K   NSGDN   T+
Sbjct: 325 EQNQGPRTANTKGALNSGDNSATTV 349


>gb|ADE75755.1| unknown [Picea sitchensis]
          Length = 667

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/74 (43%), Positives = 45/74 (60%)
 Frame = +3

Query: 12  AVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDL 191
           A LPKGYVPL K +  + Q    + YPN+    K N   W+  ++LK R K+N   +LD 
Sbjct: 287 AALPKGYVPLGKVAGCSTQGKANVLYPNNATDFKPNGHEWLVGDRLKPRGKVNGNGNLDA 346

Query: 192 LNERNRGPRTNSIK 233
           LNE+NRGPR + ++
Sbjct: 347 LNEQNRGPRISKMR 360


>ref|XP_006378617.1| hypothetical protein POPTR_0010s18300g [Populus trichocarpa]
           gi|566191452|ref|XP_002316161.2| hypothetical protein
           POPTR_0010s18300g [Populus trichocarpa]
           gi|550330069|gb|ERP56414.1| hypothetical protein
           POPTR_0010s18300g [Populus trichocarpa]
           gi|550330070|gb|EEF02332.2| hypothetical protein
           POPTR_0010s18300g [Populus trichocarpa]
          Length = 608

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +3

Query: 15  VLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDLL 194
           VL KGY P +KF +Y N   GA+ YPN+ I  K N R W  +EKLK R+K N   D  LL
Sbjct: 283 VLGKGYFPFSKFPSY-NPGKGAVLYPNNTI--KANARGWGSNEKLKTRSKTNGINDA-LL 338

Query: 195 NERNRGPRTNSIK-TTNSGDNFQETL 269
           NE+N GPRT + K +   G N  E+L
Sbjct: 339 NEQNHGPRTTNAKGSVAFGGNAAESL 364


>ref|XP_006378616.1| hypothetical protein POPTR_0010s18300g [Populus trichocarpa]
           gi|550330068|gb|ERP56413.1| hypothetical protein
           POPTR_0010s18300g [Populus trichocarpa]
          Length = 607

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +3

Query: 15  VLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDLL 194
           VL KGY P +KF +Y N   GA+ YPN+ I  K N R W  +EKLK R+K N   D  LL
Sbjct: 283 VLGKGYFPFSKFPSY-NPGKGAVLYPNNTI--KANARGWGSNEKLKTRSKTNGINDA-LL 338

Query: 195 NERNRGPRTNSIK-TTNSGDNFQETL 269
           NE+N GPRT + K +   G N  E+L
Sbjct: 339 NEQNHGPRTTNAKGSVAFGGNAAESL 364


>ref|XP_006585386.1| PREDICTED: YTH domain family protein 2 isoform X2 [Glycine max]
          Length = 497

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/77 (48%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   APTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFAD 182
           AP +VL   + P+ KF AY NQ      YPN+++ +K NT+ WV  EKLK RNK+N    
Sbjct: 178 APVSVL---HSPVAKFPAY-NQGKSGFLYPNNLLNVKANTKGWVSTEKLKQRNKVN---- 229

Query: 183 LDLLNERNRGPRTNSIK 233
            D LNE+N+GPRT + K
Sbjct: 230 -DSLNEQNQGPRTANAK 245


>ref|XP_003531473.1| PREDICTED: YTH domain family protein 2 isoform X1 [Glycine max]
          Length = 579

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/77 (48%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   APTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFAD 182
           AP +VL   + P+ KF AY NQ      YPN+++ +K NT+ WV  EKLK RNK+N    
Sbjct: 260 APVSVL---HSPVAKFPAY-NQGKSGFLYPNNLLNVKANTKGWVSTEKLKQRNKVN---- 311

Query: 183 LDLLNERNRGPRTNSIK 233
            D LNE+N+GPRT + K
Sbjct: 312 -DSLNEQNQGPRTANAK 327


>ref|XP_003595920.1| YTH domain family protein [Medicago truncatula]
           gi|355484968|gb|AES66171.1| YTH domain family protein
           [Medicago truncatula]
          Length = 477

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +3

Query: 18  LPKGYVPLNKFSAYANQVNGALHYPNSVIPMKE-NTRCWVDDEKLKARNKLNSFADLDLL 194
           +PKG  P+ KFSAY NQ      Y N+   MK  +T+ WV  EKLK R+K+N     D L
Sbjct: 164 MPKGSFPVAKFSAY-NQGKSGFPYQNNFPNMKATSTKGWVSTEKLKLRSKVN-----DSL 217

Query: 195 NERNRGPRTNSIK-TTNSGDNFQE 263
           NE+N+GPRT + K T NSG N ++
Sbjct: 218 NEQNQGPRTANAKGTLNSGGNSED 241


>ref|XP_003595919.1| YTH domain family protein [Medicago truncatula]
           gi|355484967|gb|AES66170.1| YTH domain family protein
           [Medicago truncatula]
          Length = 584

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +3

Query: 18  LPKGYVPLNKFSAYANQVNGALHYPNSVIPMKE-NTRCWVDDEKLKARNKLNSFADLDLL 194
           +PKG  P+ KFSAY NQ      Y N+   MK  +T+ WV  EKLK R+K+N     D L
Sbjct: 271 MPKGSFPVAKFSAY-NQGKSGFPYQNNFPNMKATSTKGWVSTEKLKLRSKVN-----DSL 324

Query: 195 NERNRGPRTNSIK-TTNSGDNFQE 263
           NE+N+GPRT + K T NSG N ++
Sbjct: 325 NEQNQGPRTANAKGTLNSGGNSED 348


>gb|EMJ15149.1| hypothetical protein PRUPE_ppa003664mg [Prunus persica]
          Length = 558

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/72 (45%), Positives = 41/72 (56%)
 Frame = +3

Query: 18  LPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDLLN 197
           L KGY  + K   Y NQ  G L YPN+   +K N + W   EKLK R+K N   D+ L N
Sbjct: 260 LAKGYFSVAKVPVY-NQGTGGLLYPNNSPTLKANAKGWGGSEKLKPRSKANGVRDISLFN 318

Query: 198 ERNRGPRTNSIK 233
           E+N GPRT + K
Sbjct: 319 EKNHGPRTTNPK 330


>ref|XP_002518823.1| yth domain-containing protein, putative [Ricinus communis]
           gi|223541996|gb|EEF43541.1| yth domain-containing
           protein, putative [Ricinus communis]
          Length = 575

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = +3

Query: 27  GYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDLLNERN 206
           GY P  +F +Y  +  G L Y NS  P K N R W ++EK KAR+K+N+ +DL+LLNE+N
Sbjct: 267 GYYPSGRFPSYGQEKGGVL-YTNS--PDKTNARVWSNNEKPKARSKINNTSDLNLLNEQN 323

Query: 207 RGPRTNSIK 233
            G RT + K
Sbjct: 324 YGLRTTNTK 332


>ref|XP_006598229.1| PREDICTED: YTH domain family protein 1-like isoform X2 [Glycine
           max]
          Length = 575

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = +3

Query: 3   APTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFAD 182
           AP +VL   + P+ KF  Y NQ      YPN+++ +K NT+ WV  EKLK RNK+N    
Sbjct: 259 APVSVL---HSPVVKFPTY-NQGKSEFLYPNNLLNVKANTKGWVSTEKLKQRNKVN---- 310

Query: 183 LDLLNERNRGPRTNSIK 233
            D LNE+N+GPRT + K
Sbjct: 311 -DSLNEQNQGPRTANAK 326


>ref|XP_003546840.1| PREDICTED: YTH domain family protein 1-like isoform X1 [Glycine
           max]
          Length = 577

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = +3

Query: 3   APTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFAD 182
           AP +VL   + P+ KF  Y NQ      YPN+++ +K NT+ WV  EKLK RNK+N    
Sbjct: 259 APVSVL---HSPVVKFPTY-NQGKSEFLYPNNLLNVKANTKGWVSTEKLKQRNKVN---- 310

Query: 183 LDLLNERNRGPRTNSIK 233
            D LNE+N+GPRT + K
Sbjct: 311 -DSLNEQNQGPRTANAK 326


>ref|XP_004969542.1| PREDICTED: uncharacterized protein LOC101780019 [Setaria italica]
          Length = 610

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
 Frame = +3

Query: 3   APTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFAD 182
           A  A   KGY+P +KF  ++N    +  Y N  I +KEN R W+++EKLK R+KLN   D
Sbjct: 256 ASGASTTKGYLPSSKFVTHSNNQGKSSVYQNKGINVKENGRSWINNEKLKTRSKLNGHGD 315

Query: 183 LDLLNERNR--------GPRTNSIKTTNSGD 251
            D+ NE +          PR + +  +++GD
Sbjct: 316 SDISNENSHTDNSKHSLSPRGDVVGLSSAGD 346


>gb|ESW21144.1| hypothetical protein PHAVU_005G045600g [Phaseolus vulgaris]
          Length = 575

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/77 (45%), Positives = 48/77 (62%)
 Frame = +3

Query: 3   APTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFAD 182
           AP +VL   + P+ KF  Y NQ      YPN+++ +K NT+ WV  +KLK RNK+N    
Sbjct: 256 APVSVL---HSPVAKFPTY-NQGKTGFLYPNNLLSVKTNTKGWVSTDKLKNRNKVN---- 307

Query: 183 LDLLNERNRGPRTNSIK 233
            D LNE+N+GPRT + K
Sbjct: 308 -DSLNEQNQGPRTANAK 323


>ref|XP_002311277.2| hypothetical protein POPTR_0008s08030g [Populus trichocarpa]
           gi|550332645|gb|EEE88644.2| hypothetical protein
           POPTR_0008s08030g [Populus trichocarpa]
          Length = 585

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/76 (47%), Positives = 42/76 (55%)
 Frame = +3

Query: 6   PTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADL 185
           P+ V+ KGY P  KF  Y N   GA+ YPNS    K N R W   EK K R+K N   D 
Sbjct: 257 PSDVMGKGYFPFAKFPPY-NPGKGAMLYPNSTT--KVNARGWGGSEKPKTRSKTNGIDDA 313

Query: 186 DLLNERNRGPRTNSIK 233
            L NE+N GPRT + K
Sbjct: 314 -LPNEQNYGPRTTNAK 328


>ref|XP_004293799.1| PREDICTED: uncharacterized protein LOC101301082 [Fragaria vesca
           subsp. vesca]
          Length = 574

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/72 (43%), Positives = 42/72 (58%)
 Frame = +3

Query: 24  KGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEKLKARNKLNSFADLDLLNER 203
           KGY  + K   Y NQ    L YPN+   +K N + W   EK+K R+K NS  D++L +E+
Sbjct: 279 KGYYSVAKIPVY-NQGTSGLLYPNN--SLKANPKSWGGPEKVKTRSKANSVRDINLFSEK 335

Query: 204 NRGPRTNSIKTT 239
           N GPRT + K T
Sbjct: 336 NHGPRTTNPKGT 347


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