BLASTX nr result

ID: Zingiber24_contig00015364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00015364
         (258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004962632.1| PREDICTED: selenoprotein H-like [Setaria ita...    55   7e-06
gb|AFW56342.1| selT/selW/selH selenoprotein domain containing pr...    55   9e-06
gb|ACN36768.1| unknown [Zea mays]                                      55   9e-06
ref|NP_001149449.1| selT/selW/selH selenoprotein domain containi...    55   9e-06
gb|ACG34879.1| selT/selW/selH selenoprotein domain containing pr...    55   9e-06

>ref|XP_004962632.1| PREDICTED: selenoprotein H-like [Setaria italica]
          Length = 186

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   SLLNMPRPFTPMKELDMDQVIKDIVKKIT 89
           SLLNMPRPFTPMK+LDMD+VIKDI KKI+
Sbjct: 158 SLLNMPRPFTPMKKLDMDEVIKDIAKKIS 186


>gb|AFW56342.1| selT/selW/selH selenoprotein domain containing protein [Zea mays]
          Length = 209

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   SLLNMPRPFTPMKELDMDQVIKDIVKKIT 89
           SLLNMPRPFTPMK+LDMD+VIKDI KKI+
Sbjct: 181 SLLNMPRPFTPMKKLDMDKVIKDIAKKIS 209


>gb|ACN36768.1| unknown [Zea mays]
          Length = 209

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   SLLNMPRPFTPMKELDMDQVIKDIVKKIT 89
           SLLNMPRPFTPMK+LDMD+VIKDI KKI+
Sbjct: 181 SLLNMPRPFTPMKKLDMDKVIKDIAKKIS 209


>ref|NP_001149449.1| selT/selW/selH selenoprotein domain containing protein [Zea mays]
           gi|195627312|gb|ACG35486.1| selT/selW/selH selenoprotein
           domain containing protein [Zea mays]
          Length = 209

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   SLLNMPRPFTPMKELDMDQVIKDIVKKIT 89
           SLLNMPRPFTPMK+LDMD+VIKDI KKI+
Sbjct: 181 SLLNMPRPFTPMKKLDMDKVIKDIAKKIS 209


>gb|ACG34879.1| selT/selW/selH selenoprotein domain containing protein [Zea mays]
          Length = 183

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   SLLNMPRPFTPMKELDMDQVIKDIVKKIT 89
           SLLNMPRPFTPMK+LDMD+VIKDI KKI+
Sbjct: 155 SLLNMPRPFTPMKKLDMDKVIKDIAKKIS 183


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