BLASTX nr result

ID: Zingiber24_contig00014902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00014902
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS62599.1| Kinesin-related protein 4 [Triticum urartu]             56   6e-06
gb|EOY21099.1| ATP binding microtubule motor family protein isof...    52   1e-05

>gb|EMS62599.1| Kinesin-related protein 4 [Triticum urartu]
          Length = 1276

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = -2

Query: 361 EALLMEKELKIKQMEMEMETLKRDRDLTRSQLDQLRSKVGNCQ 233
           E L+MEK+ KIKQME+EME L+++RD  RSQL++LR K+G+ Q
Sbjct: 392 EILIMEKDSKIKQMEIEMEELRKERDNARSQLEELRKKMGDKQ 434


>gb|EOY21099.1| ATP binding microtubule motor family protein isoform 2 [Theobroma
           cacao]
          Length = 763

 Score = 52.0 bits (123), Expect(2) = 1e-05
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = -2

Query: 346 EKELKIKQMEMEMETLKRDRDLTRSQLDQLRSKVGNCQVMLRIPNSDKR 200
           EK+LKI+QMEME+E LKR RDL +SQ+D+LR K+   Q  +  P    R
Sbjct: 390 EKDLKIQQMEMEIEELKRQRDLAQSQVDELRRKLQEDQQQISNPLESSR 438



 Score = 22.7 bits (47), Expect(2) = 1e-05
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 101 NPFDSSPCRVVKSLTFSG-LSPNGNDKSHKKAER 3
           NP +SS   V K L++SG LSP  + K   + +R
Sbjct: 432 NPLESSRPSVKKCLSYSGVLSPKLDGKELGRNDR 465


Top