BLASTX nr result
ID: Zingiber24_contig00014808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00014808
(526 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 127 1e-27
ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japonica Group] g... 124 2e-26
ref|XP_004973720.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 120 2e-25
ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 118 7e-25
ref|XP_006433911.1| hypothetical protein CICLE_v10001605mg [Citr... 118 9e-25
ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citr... 118 9e-25
ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 117 2e-24
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera] 117 2e-24
ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [S... 114 1e-23
gb|EOY15917.1| RNA-binding family protein, putative [Theobroma c... 114 2e-23
gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis] 113 2e-23
ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 113 2e-23
ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 113 2e-23
ref|XP_002306558.1| RNA recognition motif-containing family prot... 113 3e-23
gb|ESW08278.1| hypothetical protein PHAVU_009G033600g [Phaseolus... 112 4e-23
ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chlorop... 112 5e-23
gb|ACU23303.1| unknown [Glycine max] 112 5e-23
gb|ACR36518.1| unknown [Zea mays] gi|414869197|tpg|DAA47754.1| T... 112 7e-23
ref|NP_001150253.1| ribonucleoprotein [Zea mays] gi|195637832|gb... 112 7e-23
gb|ACF82264.1| unknown [Zea mays] gi|414869196|tpg|DAA47753.1| T... 112 7e-23
>ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Oryza
brachyantha]
Length = 352
Score = 127 bits (320), Expect = 1e-27
Identities = 63/85 (74%), Positives = 73/85 (85%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
RTRLIAQNIPW TADD++ALF KHG+V+D+ELSMYN SRNRGLAFVTM SE EA++ALN
Sbjct: 155 RTRLIAQNIPWDCTADDMRALFGKHGSVVDVELSMYNSSRNRGLAFVTMGSEEEALSALN 214
Query: 450 HLNSYDLDGRVIKVEFARSVKKTPV 524
+LNS L+ R IKV+FARS KK PV
Sbjct: 215 NLNSTTLNDRTIKVDFARSRKKRPV 239
>ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japonica Group]
gi|42408160|dbj|BAD09298.1| putative RNA-binding protein
cp33 [Oryza sativa Japonica Group]
gi|113624042|dbj|BAF23987.1| Os08g0483200 [Oryza sativa
Japonica Group] gi|125561943|gb|EAZ07391.1| hypothetical
protein OsI_29641 [Oryza sativa Indica Group]
gi|125603790|gb|EAZ43115.1| hypothetical protein
OsJ_27706 [Oryza sativa Japonica Group]
gi|215686913|dbj|BAG90783.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215701414|dbj|BAG92838.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 269
Score = 124 bits (310), Expect = 2e-26
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
RTRLIAQNIPW TADD++ALF KHG+V+D+ELSMYN +RNRGLAFVTM SE EA++ALN
Sbjct: 72 RTRLIAQNIPWDCTADDMRALFGKHGSVVDVELSMYNSTRNRGLAFVTMGSEEEALSALN 131
Query: 450 HLNSYDLDGRVIKVEFARSVKK 515
HLNS L+ R IKV+F RS KK
Sbjct: 132 HLNSTTLNDRTIKVDFTRSRKK 153
>ref|XP_004973720.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Setaria
italica]
Length = 274
Score = 120 bits (300), Expect = 2e-25
Identities = 59/84 (70%), Positives = 69/84 (82%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
RTRL+AQNIPW T DD++ALF KHG+V+ +ELSMYN S+NRGLAFVTM SE EA+AALN
Sbjct: 71 RTRLVAQNIPWDYTGDDMRALFEKHGSVVGVELSMYNASKNRGLAFVTMGSEEEALAALN 130
Query: 450 HLNSYDLDGRVIKVEFARSVKKTP 521
+LNS LD R IKV+FAR KK P
Sbjct: 131 NLNSTTLDDRKIKVDFARPRKKQP 154
>ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 306
Score = 118 bits (296), Expect = 7e-25
Identities = 55/85 (64%), Positives = 71/85 (83%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
S+TRL+AQN+PW ST +DI+ALF +HGTVLDIELSM++ +RNRGLAFVTM S +EA AAL
Sbjct: 99 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAAL 158
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
N+L SY+ +GR +KV +A+ KK P
Sbjct: 159 NNLESYEFEGRTLKVNYAKVKKKNP 183
>ref|XP_006433911.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536033|gb|ESR47151.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 331
Score = 118 bits (295), Expect = 9e-25
Identities = 54/85 (63%), Positives = 71/85 (83%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
S+TRL+AQN+PW ST +DI+ALF +HGTVLD+ELSM++ +RNRGLAFVTM S +EA AAL
Sbjct: 156 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAAL 215
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
N+L SY+ +GR +KV +A+ KK P
Sbjct: 216 NNLESYEFEGRTLKVNYAKIKKKNP 240
>ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536032|gb|ESR47150.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 363
Score = 118 bits (295), Expect = 9e-25
Identities = 54/85 (63%), Positives = 71/85 (83%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
S+TRL+AQN+PW ST +DI+ALF +HGTVLD+ELSM++ +RNRGLAFVTM S +EA AAL
Sbjct: 156 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAAL 215
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
N+L SY+ +GR +KV +A+ KK P
Sbjct: 216 NNLESYEFEGRTLKVNYAKIKKKNP 240
>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product
[Vitis vinifera]
Length = 294
Score = 117 bits (293), Expect = 2e-24
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
SRTRLIAQNIPW TA DI++LF K+GTVLD+ELSM+N +RNRGLAF++M S EA+AAL
Sbjct: 87 SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
++L SY+L+GR IKV +A KK P
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKP 171
>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 117 bits (293), Expect = 2e-24
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
SRTRLIAQNIPW TA DI++LF K+GTVLD+ELSM+N +RNRGLAF++M S EA+AAL
Sbjct: 87 SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
++L SY+L+GR IKV +A KK P
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKP 171
>ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
gi|241942342|gb|EES15487.1| hypothetical protein
SORBIDRAFT_07g029220 [Sorghum bicolor]
Length = 266
Score = 114 bits (286), Expect = 1e-23
Identities = 56/84 (66%), Positives = 69/84 (82%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
RTRL+AQNIPW STAD+++ALF HG+V+ +ELSMY+ S+NRGLAFVTM SE +A+AAL
Sbjct: 71 RTRLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYSASKNRGLAFVTMGSEEDALAALT 130
Query: 450 HLNSYDLDGRVIKVEFARSVKKTP 521
HLNS L+ R IKV+FAR KK P
Sbjct: 131 HLNSTILNDRKIKVDFARPRKKQP 154
>gb|EOY15917.1| RNA-binding family protein, putative [Theobroma cacao]
Length = 290
Score = 114 bits (284), Expect = 2e-23
Identities = 51/85 (60%), Positives = 71/85 (83%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
S+TRLIAQN+PW T +DI++LF K+GTV+D+ELSM+N +RNRGLAFV+MAS EA+AAL
Sbjct: 84 SKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVELSMHNKARNRGLAFVSMASPEEALAAL 143
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
N+L SY+ +GR +++ +A+ KK P
Sbjct: 144 NNLESYEFEGRTLRLNYAKPKKKRP 168
>gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis]
Length = 605
Score = 113 bits (283), Expect = 2e-23
Identities = 54/82 (65%), Positives = 68/82 (82%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
+ RL AQN+PW T +DI+ALF K+GTV D+ELSM+N +RNRGLAFVTM S EA+AALN
Sbjct: 405 KNRLYAQNVPWNCTPEDIRALFEKYGTVEDVELSMFNKTRNRGLAFVTMGSPEEALAALN 464
Query: 450 HLNSYDLDGRVIKVEFARSVKK 515
+L SY+LDGRVIK+++AR KK
Sbjct: 465 NLQSYELDGRVIKIDYARLRKK 486
>ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449497014|ref|XP_004160289.1| PREDICTED: 31
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 113 bits (283), Expect = 2e-23
Identities = 52/85 (61%), Positives = 70/85 (82%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
S+TRL+AQN+PW ST +DI++LF K+GTVLD+ELSMYN RNRGLAFVTM S EA+AAL
Sbjct: 97 SQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAAL 156
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
N+L SY+ +GR +++ +A+ K+ P
Sbjct: 157 NNLESYEFEGRTLRLNYAKLKKEKP 181
>ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Glycine max] gi|571450000|ref|XP_006578310.1|
PREDICTED: 29 kDa ribonucleoprotein A,
chloroplastic-like isoform X2 [Glycine max]
Length = 297
Score = 113 bits (283), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
SRTRL+AQN+PW ST +DI++LF KHG VL +ELSMY +RNRGLAFV M S EA+ AL
Sbjct: 69 SRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKKNRNRGLAFVEMGSPEEALEAL 128
Query: 447 NHLNSYDLDGRVIKVEFARSVK-KTP 521
N+L SY+ +GRVIKV +AR K KTP
Sbjct: 129 NNLESYEFEGRVIKVNYARPKKEKTP 154
>ref|XP_002306558.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222856007|gb|EEE93554.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 309
Score = 113 bits (282), Expect = 3e-23
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
S+TRL A N+PW TA+DI+ALF K GTV+D+ELSMY+ RNRGLAFVTM S EAVAAL
Sbjct: 102 SKTRLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKIRNRGLAFVTMGSPEEAVAAL 161
Query: 447 NHLNSYDLDGRVIKVEFARSVKKTP 521
N+L SY+ +GR +K+ +A++ KK P
Sbjct: 162 NNLESYEFEGRTLKMNYAKAKKKKP 186
>gb|ESW08278.1| hypothetical protein PHAVU_009G033600g [Phaseolus vulgaris]
gi|561009372|gb|ESW08279.1| hypothetical protein
PHAVU_009G033600g [Phaseolus vulgaris]
Length = 306
Score = 112 bits (281), Expect = 4e-23
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
SRTRL+AQN+PW ST +DI++LF KHG VLD+ELSMY RNRGLAFV M S EA+ AL
Sbjct: 78 SRTRLLAQNVPWTSTPEDIRSLFEKHGKVLDVELSMYKKDRNRGLAFVEMGSPEEALEAL 137
Query: 447 NHLNSYDLDGRVIKVEFAR-SVKKTP 521
N L SY+ +GRV++V +AR KKTP
Sbjct: 138 NKLESYEFEGRVMRVNYARPKKKKTP 163
>ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 345
Score = 112 bits (280), Expect = 5e-23
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
SRTRL+AQN+PW ST +DI+ LF KHG VL++ELSMY +RNRGLAFV M S EA+ AL
Sbjct: 116 SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEAL 175
Query: 447 NHLNSYDLDGRVIKVEFARSVKK 515
N+L SY+ +GRVIKV +AR K+
Sbjct: 176 NNLESYEFEGRVIKVNYARPKKE 198
>gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 112 bits (280), Expect = 5e-23
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +3
Query: 267 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 446
SRTRL+AQN+PW ST +DI+ LF KHG VL++ELSMY +RNRGLAFV M S EA+ AL
Sbjct: 86 SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEAL 145
Query: 447 NHLNSYDLDGRVIKVEFARSVKK 515
N+L SY+ +GRVIKV +AR K+
Sbjct: 146 NNLESYEFEGRVIKVNYARPKKE 168
>gb|ACR36518.1| unknown [Zea mays] gi|414869197|tpg|DAA47754.1| TPA: hypothetical
protein ZEAMMB73_464077 [Zea mays]
Length = 169
Score = 112 bits (279), Expect = 7e-23
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
+TRL+AQNIPW TAD+++ALF HG+V+ +ELSMY+ ++NRGLAFVTM SE EA+AAL
Sbjct: 70 KTRLVAQNIPWDCTADEMRALFESHGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALT 129
Query: 450 HLNSYDLDGRVIKVEFARSVKKTP 521
HLNS L+ R IKV+FAR KK P
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQP 153
>ref|NP_001150253.1| ribonucleoprotein [Zea mays] gi|195637832|gb|ACG38384.1|
ribonucleoprotein [Zea mays]
Length = 275
Score = 112 bits (279), Expect = 7e-23
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
+TRL+AQNIPW TAD+++ALF HG+V+ +ELSMY+ ++NRGLAFVTM SE EA+AAL
Sbjct: 70 KTRLVAQNIPWDCTADEMRALFESHGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALT 129
Query: 450 HLNSYDLDGRVIKVEFARSVKKTP 521
HLNS L+ R IKV+FAR KK P
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQP 153
>gb|ACF82264.1| unknown [Zea mays] gi|414869196|tpg|DAA47753.1| TPA:
ribonucleoprotein [Zea mays]
Length = 275
Score = 112 bits (279), Expect = 7e-23
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +3
Query: 270 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 449
+TRL+AQNIPW TAD+++ALF HG+V+ +ELSMY+ ++NRGLAFVTM SE EA+AAL
Sbjct: 70 KTRLVAQNIPWDCTADEMRALFESHGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALT 129
Query: 450 HLNSYDLDGRVIKVEFARSVKKTP 521
HLNS L+ R IKV+FAR KK P
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQP 153