BLASTX nr result
ID: Zingiber24_contig00014651
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00014651
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [A... 112 7e-23
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor... 108 6e-22
ref|XP_006349171.1| PREDICTED: probable pre-mRNA-splicing factor... 108 7e-22
ref|XP_004229376.1| PREDICTED: probable pre-mRNA-splicing factor... 108 7e-22
ref|XP_006402386.1| hypothetical protein EUTSA_v10005810mg [Eutr... 108 1e-21
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor... 108 1e-21
gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent R... 107 1e-21
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor... 107 1e-21
ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Med... 107 2e-21
ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu... 107 2e-21
ref|XP_004495890.1| PREDICTED: probable pre-mRNA-splicing factor... 106 4e-21
ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Caps... 106 4e-21
emb|CBI36976.3| unnamed protein product [Vitis vinifera] 105 8e-21
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 105 8e-21
ref|XP_006649980.1| PREDICTED: probable pre-mRNA-splicing factor... 104 1e-20
ref|XP_004984587.1| PREDICTED: probable pre-mRNA-splicing factor... 104 1e-20
gb|AFW88544.1| putative RNA helicase family protein [Zea mays] 104 1e-20
ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA h... 104 1e-20
gb|ESW35196.1| hypothetical protein PHAVU_001G214700g [Phaseolus... 103 2e-20
ref|NP_182247.1| putative pre-mRNA-splicing factor ATP-dependent... 103 3e-20
>ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [Amborella trichopoda]
gi|548848073|gb|ERN07176.1| hypothetical protein
AMTR_s00019p00154740 [Amborella trichopoda]
Length = 714
Score = 112 bits (279), Expect = 7e-23
Identities = 50/60 (83%), Positives = 57/60 (95%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTDV+GEW+IDIAPHY+DLSNFP+CEAKRVLERLY KR +++GESK RK
Sbjct: 655 YVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPNCEAKRVLERLYQKRERDRGESKGRK 714
>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 722
Score = 108 bits (271), Expect = 6e-22
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++D+APHY+DLSNFP CEAKRVLERLY KR KEK E+++RK
Sbjct: 663 YVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCEAKRVLERLYKKREKEKEEARSRK 722
>ref|XP_006349171.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Solanum tuberosum]
Length = 723
Score = 108 bits (270), Expect = 7e-22
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHY+DL+NFP CEAKRVLERLY KR +EK ESK++K
Sbjct: 664 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPQCEAKRVLERLYKKREREKDESKSKK 723
>ref|XP_004229376.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Solanum lycopersicum]
Length = 723
Score = 108 bits (270), Expect = 7e-22
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHY+DL+NFP CEAKRVLERLY KR +EK ESK++K
Sbjct: 664 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPQCEAKRVLERLYKKREREKDESKSKK 723
>ref|XP_006402386.1| hypothetical protein EUTSA_v10005810mg [Eutrema salsugineum]
gi|557103485|gb|ESQ43839.1| hypothetical protein
EUTSA_v10005810mg [Eutrema salsugineum]
Length = 723
Score = 108 bits (269), Expect = 1e-21
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++D+APHY+DLSNFP+CEAKRVLE+LY KR +EK ESK RK
Sbjct: 664 YVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPNCEAKRVLEKLYKKREREKEESKNRK 723
>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 1 [Glycine max]
Length = 721
Score = 108 bits (269), Expect = 1e-21
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHY+DLSNFP CEAKRVLERLY KR KEK E+++R+
Sbjct: 662 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLERLYKKREKEKEEARSRR 721
>gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 922
Score = 107 bits (268), Expect = 1e-21
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHYFDL NFP CEAKRVLERLY KR KE+ ES+ RK
Sbjct: 863 YVLTSRNFIRTVTDIRGEWLVDIAPHYFDLENFPQCEAKRVLERLYKKREKEREESRNRK 922
>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 720
Score = 107 bits (268), Expect = 1e-21
Identities = 46/60 (76%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++D+APHY+DLSNFP CEAKRVLERLY KR KEK E+++R+
Sbjct: 661 YVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCEAKRVLERLYKKREKEKEEARSRR 720
>ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Medicago truncatula]
gi|355480419|gb|AES61622.1| ATP-dependent RNA
helicase-like protein [Medicago truncatula]
Length = 721
Score = 107 bits (267), Expect = 2e-21
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHY+DLSNFP CEAKRVLE+LY KR KEK E++ RK
Sbjct: 662 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLEKLYKKREKEKDEARNRK 721
>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 731
Score = 107 bits (266), Expect = 2e-21
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHY+DL NFP+CEAKRVLE+LY KR +EK ESK RK
Sbjct: 672 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLDNFPNCEAKRVLEKLYKKREREKEESKNRK 731
>ref|XP_004495890.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cicer arietinum]
Length = 721
Score = 106 bits (264), Expect = 4e-21
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHY+DLSNFP CEAKRVLE+LY KR K+K E++ RK
Sbjct: 662 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLEKLYKKREKDKDEARNRK 721
>ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Capsella rubella]
gi|482559357|gb|EOA23548.1| hypothetical protein
CARUB_v10016742mg [Capsella rubella]
Length = 725
Score = 106 bits (264), Expect = 4e-21
Identities = 46/60 (76%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++D+A HY+DLSNFP+CEAKRVLE+LY KR +EK ESK+RK
Sbjct: 666 YVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVLEKLYKKREREKEESKSRK 725
>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 105 bits (261), Expect = 8e-21
Identities = 45/60 (75%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTDV+GEW++D+APHY+DL+NFP+CEAKRVLE+LY KR K++ ES+ RK
Sbjct: 628 YVLTSRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCEAKRVLEKLYKKREKDREESRNRK 687
>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
hypothetical protein VITISV_036050 [Vitis vinifera]
Length = 728
Score = 105 bits (261), Expect = 8e-21
Identities = 45/60 (75%), Positives = 56/60 (93%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTDV+GEW++D+APHY+DL+NFP+CEAKRVLE+LY KR K++ ES+ RK
Sbjct: 669 YVLTSRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCEAKRVLEKLYKKREKDREESRNRK 728
>ref|XP_006649980.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Oryza brachyantha]
Length = 721
Score = 104 bits (259), Expect = 1e-20
Identities = 45/57 (78%), Positives = 54/57 (94%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESK 103
YVLT+RNFIRTVTD++GEW+IDIAPHY+DLSNFPSCEAKRVLERLYNKR +E+ ++
Sbjct: 664 YVLTTRNFIRTVTDIRGEWLIDIAPHYYDLSNFPSCEAKRVLERLYNKRERERAANR 720
>ref|XP_004984587.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Setaria italica]
Length = 723
Score = 104 bits (259), Expect = 1e-20
Identities = 45/57 (78%), Positives = 54/57 (94%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESK 103
YVLT+RNFIRTVTD++GEW+IDIAPHY+DLSNFPSCEAKRVLERLYNKR +E+ ++
Sbjct: 666 YVLTTRNFIRTVTDIRGEWLIDIAPHYYDLSNFPSCEAKRVLERLYNKRERERATNR 722
>gb|AFW88544.1| putative RNA helicase family protein [Zea mays]
Length = 129
Score = 104 bits (259), Expect = 1e-20
Identities = 45/57 (78%), Positives = 54/57 (94%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESK 103
YVLT+RNFIRTVTD++GEW+IDIAPHY+DLSNFPSCEAKRVLERLYNKR +E+ ++
Sbjct: 72 YVLTTRNFIRTVTDIRGEWLIDIAPHYYDLSNFPSCEAKRVLERLYNKRERERAANR 128
>ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA helicase [Zea mays]
gi|195623176|gb|ACG33418.1| pre-mRNA-splicing factor
ATP-dependent RNA helicase [Zea mays]
gi|413955897|gb|AFW88546.1| putative RNA helicase family
protein [Zea mays]
Length = 722
Score = 104 bits (259), Expect = 1e-20
Identities = 45/57 (78%), Positives = 54/57 (94%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESK 103
YVLT+RNFIRTVTD++GEW+IDIAPHY+DLSNFPSCEAKRVLERLYNKR +E+ ++
Sbjct: 665 YVLTTRNFIRTVTDIRGEWLIDIAPHYYDLSNFPSCEAKRVLERLYNKRERERAANR 721
>gb|ESW35196.1| hypothetical protein PHAVU_001G214700g [Phaseolus vulgaris]
Length = 724
Score = 103 bits (258), Expect = 2e-20
Identities = 44/60 (73%), Positives = 55/60 (91%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLTSRNFIRTVTD++GEW++DIAPHY+DLSNFP CEAKRVLE+LY R KEK ++++R+
Sbjct: 665 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLEKLYKSREKEKEQTRSRR 724
>ref|NP_182247.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase
[Arabidopsis thaliana]
gi|3913425|sp|O22899.1|DHX15_ARATH RecName:
Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
helicase gi|2275203|gb|AAB63825.1| putative pre-mRNA
splicing factor RNA helicase [Arabidopsis thaliana]
gi|22135845|gb|AAM91108.1| At2g47250/T8I13.9
[Arabidopsis thaliana] gi|28416499|gb|AAO42780.1|
At2g47250/T8I13.9 [Arabidopsis thaliana]
gi|330255726|gb|AEC10820.1| putative pre-mRNA-splicing
factor ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 729
Score = 103 bits (256), Expect = 3e-20
Identities = 44/60 (73%), Positives = 54/60 (90%)
Frame = -3
Query: 273 YVLTSRNFIRTVTDVKGEWMIDIAPHYFDLSNFPSCEAKRVLERLYNKRTKEKGESKARK 94
YVLT+RNFIRTVTD++GEW++D+A HY+DLSNFP+CEAKR LE+LY KR +EK ESK RK
Sbjct: 670 YVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKREREKNESKNRK 729