BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00014628
         (554 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A...    80   4e-13
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]            76   6e-12
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...    74   2e-11
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no...    72   7e-11
ref|XP_002531375.1| RNA and export factor binding protein, putat...    71   2e-10
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...    71   2e-10
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor...    70   3e-10
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo...    70   4e-10
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus...    67   3e-09
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof...    66   5e-09
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor...    65   8e-09
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro...    65   1e-08
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu...    63   5e-08
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu...    62   9e-08
ref|XP_002332459.1| predicted protein [Populus trichocarpa]            62   9e-08
emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]                    61   2e-07
ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solan...    60   3e-07
emb|CAG26902.1| ALY protein [Nicotiana benthamiana]                    60   3e-07
emb|CAG26903.1| ALY protein [Nicotiana benthamiana]                    60   3e-07
ref|XP_004249625.1| PREDICTED: RNA and export factor-binding pro...    60   5e-07

>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
           gi|548848813|gb|ERN07718.1| hypothetical protein
           AMTR_s00012p00035940 [Amborella trichopoda]
          Length = 253

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFVXXXXXXXXXXXXXX 182
           LDGKPM IEI+GTN+ TPA +PQ +NG++  PNG PRS+ P  + +              
Sbjct: 159 LDGKPMKIEIVGTNLVTPAPIPQVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGR 218

Query: 183 XXXXXXX-----EPVSAAALDADLDKYHAEVMQTN 272
                       E VSAA LDADL+KYH+E MQ N
Sbjct: 219 GRGRGGRGGGRGEKVSAADLDADLEKYHSEAMQIN 253


>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
          Length = 240

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 41/89 (46%), Positives = 46/89 (51%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFVXXXXXXXXXXXXXX 182
           LDGKPM IEI+GTN+ TP  +P  +NG   NPNG PRS     SF               
Sbjct: 151 LDGKPMKIEIVGTNVATPVALPPATNGKFANPNGVPRSGQGRGSFSGRSRGPGRGARRGR 210

Query: 183 XXXXXXXEPVSAAALDADLDKYHAEVMQT 269
                  E VSA  LDADL+ YH E MQT
Sbjct: 211 GQGRGQGEKVSAEDLDADLENYHKEAMQT 239


>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
           sativus]
          Length = 237

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 44/90 (48%), Positives = 48/90 (53%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFVXXXXXXXXXXXXXX 182
           LDGKPM +EI+GTNI TPA VP PSN   GNPNG PR     R+                
Sbjct: 152 LDGKPMKLEIVGTNIVTPA-VPAPSNASFGNPNGFPRG---GRAMGRNRGGGRGRSGSGS 207

Query: 183 XXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                  E +SA  LDADLDKYH E MQ N
Sbjct: 208 GSGRGHGEKLSAEDLDADLDKYHEEAMQIN 237


>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
          Length = 248

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 43/98 (43%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPR--------SIGPVRSFVXXXXXX 158
           LDGKPM IEI+GTN+ TPA  P P+NG  GN NG PR        + G  R         
Sbjct: 153 LDGKPMKIEIVGTNVATPAAPPPPANGSFGNSNGLPRGGQGRGGGAFGRPRG--GGGGGR 210

Query: 159 XXXXXXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                          E +SA  LDADL+KYHAE MQ N
Sbjct: 211 GPRRGRGRGQGRGTGEKISADDLDADLEKYHAEAMQEN 248


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 44/93 (47%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRS---IGPVRSFVXXXXXXXXXXX 173
           LDGKPM IEI+GTNI TPA  P  +NG  GN NGAPR     G                 
Sbjct: 156 LDGKPMKIEIVGTNIATPAATPA-ANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFG 214

Query: 174 XXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                     E VSA  LDADL+KYH+E MQTN
Sbjct: 215 RGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 45/92 (48%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSI-GPVRSFVXXXXXXXXXXXXX 179
           LDGKPM IEI+GTNI TPA VP  +NG  GN NG  RS  G V S               
Sbjct: 152 LDGKPMKIEIVGTNIATPAAVPPVTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGR 211

Query: 180 XXXXXXXX-EPVSAAALDADLDKYHAEVMQTN 272
                    E VSA  LDADL+KYH+E MQ N
Sbjct: 212 GRGRGRGRGEKVSAEDLDADLEKYHSEAMQIN 243


>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
           gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
           subunit 4-like isoform X2 [Glycine max]
          Length = 247

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 46/96 (47%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFV------XXXXXXXX 164
           LDGKPM IEI+GTNI TP V P P NG +GN NG PRS G  R                 
Sbjct: 154 LDGKPMKIEIVGTNISTPGVAPAP-NGAIGNFNGVPRS-GQGRGGALRRPGGRGQGIRRD 211

Query: 165 XXXXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                        E VSA  LDADL+KYHAE MQ N
Sbjct: 212 RGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247


>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
           protein 2-like [Cucumis sativus]
          Length = 248

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 46/103 (44%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRS-------------IGPVRSFVX 143
           LDGKPM +EI+GTNI TPAV P PSN   GNPNG PR               GP R    
Sbjct: 152 LDGKPMKLEIVGTNIVTPAV-PAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRG--- 207

Query: 144 XXXXXXXXXXXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                               E +SA  LDADLDKYH E MQ N
Sbjct: 208 --RGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN 248


>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
           gi|561023569|gb|ESW22299.1| hypothetical protein
           PHAVU_005G142200g [Phaseolus vulgaris]
          Length = 245

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 44/95 (46%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFVXXXXXXXXXXXXXX 182
           LDGKPM +EI+GTNI T A VP P NG  GN  G PRS G  RS +              
Sbjct: 153 LDGKPMKVEIVGTNIATHAAVP-PVNGTFGNSGGPPRS-GQGRSGLLGRPRGAPRGRGSS 210

Query: 183 XXXXXXX-----EPVSAAALDADLDKYHAEVMQTN 272
                       E VSA  LDA+L+KYHAE MQ N
Sbjct: 211 RRGRGGRGRDRDEKVSAEDLDAELEKYHAEAMQLN 245


>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
          Length = 243

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 42/94 (44%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRS----IGPVRSFVXXXXXXXXXX 170
           LDGKPM +EI+GTNI T A  P   NG  GNP G PRS     G +              
Sbjct: 151 LDGKPMKVEIVGTNIATHAA-PPAVNGTFGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQ 209

Query: 171 XXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                      E VSA  LDADL+KYHAE MQ N
Sbjct: 210 RGRGRGRGGRDEKVSAEDLDADLEKYHAEAMQLN 243


>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
           gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
           subunit 4-like isoform X2 [Glycine max]
          Length = 247

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 44/96 (45%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFV------XXXXXXXX 164
           LDGKPM IEI+GTNI TP V P   NG +GN +G PRS G  R                 
Sbjct: 154 LDGKPMKIEIVGTNISTPGVAP-ARNGAIGNFDGVPRS-GQGRGGALRRPGGRGQGVRRD 211

Query: 165 XXXXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                        E VSA  LDADL+KYHAE MQ N
Sbjct: 212 RGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247


>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
           sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
           and export factor-binding protein 2-like [Cucumis
           sativus]
          Length = 237

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/94 (45%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSI----GPVRSFVXXXXXXXXXX 170
           LDGKPM IEI+GTNI TPAV P  +     N NGAPR      GP               
Sbjct: 150 LDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGP------PSRQRGHGF 203

Query: 171 XXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                      E VSA  LDADL+KYHAE MQ N
Sbjct: 204 GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN 237


>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
           gi|550321276|gb|ERP51753.1| hypothetical protein
           POPTR_0016s11470g [Populus trichocarpa]
          Length = 245

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/93 (43%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPN-GAPRSIGPVRSFV--XXXXXXXXXXX 173
           LDGKPM IEI+GTNI T   VP  +NG+  N N  APRS    R                
Sbjct: 153 LDGKPMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSSQGRGGTTGRPRGGGHGVRR 212

Query: 174 XXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                     E +SA  LDADL+KYH+E MQ N
Sbjct: 213 GGRGRGRGRGEKISAEDLDADLEKYHSEAMQEN 245


>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
           gi|550321275|gb|ERP51752.1| hypothetical protein
           POPTR_0016s11470g [Populus trichocarpa]
          Length = 244

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPN-GAPRSI-GPVRSFVXXXXXXXXXXXX 176
           LDGKPM IEI+GTNI T   VP  +NG+  N N  APRS  G   +              
Sbjct: 153 LDGKPMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSQGRGGTTGRPRGGGHGVRRG 212

Query: 177 XXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                    E +SA  LDADL+KYH+E MQ N
Sbjct: 213 GRGRGRGRGEKISAEDLDADLEKYHSEAMQEN 244


>ref|XP_002332459.1| predicted protein [Populus trichocarpa]
          Length = 164

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPN-GAPRSI-GPVRSFVXXXXXXXXXXXX 176
           LDGKPM IEI+GTNI T   VP  +NG+  N N  APRS  G   +              
Sbjct: 73  LDGKPMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSQGRGGTTGRPRGGGHGVRRG 132

Query: 177 XXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                    E +SA  LDADL+KYH+E MQ N
Sbjct: 133 GRGRGRGRGEKISAEDLDADLEKYHSEAMQEN 164


>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
          Length = 246

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/90 (42%), Positives = 44/90 (48%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFVXXXXXXXXXXXXXX 182
           LDGKPM IE  G NI  PA+ P   N +  NPN APRS      F               
Sbjct: 158 LDGKPMKIEFAGPNIGAPAL-PPIRNRLYRNPNPAPRSQQRGGGFRRPPRGGRGSMRKEG 216

Query: 183 XXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                  E +SA  LDADL+KYH+E M+TN
Sbjct: 217 GRGRGRGENISAEDLDADLEKYHSEAMETN 246


>ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solanum lycopersicum]
          Length = 251

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 46/98 (46%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMG--NPNGAPRSIGPVR------SFVXXXXXX 158
           LDGKPM IEI+GTNI TP      SNG  G  + NGAPRS G VR      S        
Sbjct: 157 LDGKPMKIEIVGTNIVTPTA--PFSNGAFGFGDTNGAPRS-GQVRGGGFGRSRGGRGRDR 213

Query: 159 XXXXXXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                          E VSA  LDADL KYH E MQTN
Sbjct: 214 GFRGGNRGWGRGGRGEKVSAEDLDADLMKYHTEAMQTN 251


>emb|CAG26902.1| ALY protein [Nicotiana benthamiana]
          Length = 249

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 38/90 (42%), Positives = 43/90 (47%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFVXXXXXXXXXXXXXX 182
           LDGKPM IE  G NI  P + P   N +  NPN APRS      F               
Sbjct: 161 LDGKPMKIEFAGPNIGAPTLPPL-RNRLYRNPNPAPRSQQRGGGFRRPPRGGRGSMRKEG 219

Query: 183 XXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                  E ++A  LDADL+KYHAE MQTN
Sbjct: 220 GRGRGRVENITAEDLDADLEKYHAEAMQTN 249


>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
          Length = 252

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/95 (44%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAP-----RSIGPVRSFVXXXXXXXXX 167
           LDGKPM IEI+GTNI TPA          G+ NG P     RS G  RS           
Sbjct: 158 LDGKPMKIEIVGTNIATPAAPAFNGAFGFGDTNGGPRTDQARSGGFGRSRGGRGRGRGFR 217

Query: 168 XXXXXXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                       E VSA  LDADL KYH E MQTN
Sbjct: 218 GGSRGRGRGDRGEKVSAEDLDADLMKYHTEAMQTN 252


>ref|XP_004249625.1| PREDICTED: RNA and export factor-binding protein 2-like isoform 2
           [Solanum lycopersicum]
          Length = 239

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   LDGKPMNIEIIGTNIPTPAVVPQPSNGVMGNPNGAPRSIGPVRSFV-XXXXXXXXXXXXX 179
           LDGKPM IE+ GTNI  PA +P   N + GNPN A RS      F               
Sbjct: 150 LDGKPMKIELAGTNIAPPA-LPPIRNRLYGNPNPATRSQQRGGGFSRPRGGGGRGSMRKD 208

Query: 180 XXXXXXXXEPVSAAALDADLDKYHAEVMQTN 272
                   + VSA  LDA+L+KYHAE MQTN
Sbjct: 209 GGRGRGRGQNVSAEDLDAELEKYHAEAMQTN 239