BLASTX nr result

ID: Zingiber24_contig00014489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00014489
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA49895.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea m...    59   9e-07
tpg|DAA49894.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea m...    59   9e-07
ref|XP_006662372.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...    56   4e-06
dbj|BAK02808.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   6e-06

>tpg|DAA49895.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea mays]
          Length = 810

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = -2

Query: 421 MMPPVPRNISELGMTSM-VGMGQRPPPGMRREETDTRKADTRHKREMDQISGRPSPSARR 245
           MMP VPR++SEL + +M + MG   PP M REE D RK + R +REMD+ + R     R 
Sbjct: 565 MMPGVPRDLSELAVNAMGINMG---PPVMSREEFDPRKPEHRRRREMDRFNDRERERDRS 621

Query: 244 RDMEHPRNKELS 209
           R+ E  R +E S
Sbjct: 622 RERERERERERS 633


>tpg|DAA49894.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea mays]
          Length = 1019

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = -2

Query: 421 MMPPVPRNISELGMTSM-VGMGQRPPPGMRREETDTRKADTRHKREMDQISGRPSPSARR 245
           MMP VPR++SEL + +M + MG   PP M REE D RK + R +REMD+ + R     R 
Sbjct: 613 MMPGVPRDLSELAVNAMGINMG---PPVMSREEFDPRKPEHRRRREMDRFNDRERERDRS 669

Query: 244 RDMEHPRNKELS 209
           R+ E  R +E S
Sbjct: 670 RERERERERERS 681


>ref|XP_006662372.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Oryza
           brachyantha]
          Length = 681

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/69 (44%), Positives = 41/69 (59%)
 Frame = -2

Query: 421 MMPPVPRNISELGMTSMVGMGQRPPPGMRREETDTRKADTRHKREMDQISGRPSPSARRR 242
           MMP VPRN+SEL + SM GM   PP  + R+E D RK D R +REM++ + R       R
Sbjct: 568 MMPGVPRNLSELAVNSM-GMNMGPPV-VSRDEFDLRKPDNRRRREMERFNEREREREHSR 625

Query: 241 DMEHPRNKE 215
           + E  R +E
Sbjct: 626 ERERERERE 634


>dbj|BAK02808.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 935

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = -2

Query: 421 MMPPVPRNISELGMTSMVGMGQRPPPGMRREETDTRKADTRHKREMDQISGRPSPSARRR 242
           MMP VPR++SEL + SM GM   PP  +RR+E + RK D R +REMD+ +GR     R R
Sbjct: 601 MMPTVPRDLSELAVNSM-GMNMGPPV-VRRDEFEPRKPDGR-RREMDRFNGRERD--RER 655

Query: 241 DMEHPRNKE 215
           + EH R +E
Sbjct: 656 EREHSRERE 664


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