BLASTX nr result
ID: Zingiber24_contig00014343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00014343
(248 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB28864.1| hypothetical protein L484_015797 [Morus notabilis] 67 3e-09
emb|CAE03548.2| OSJNBa0060D06.14 [Oryza sativa Japonica Group] 64 2e-08
dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Grou... 62 6e-08
gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subc... 62 6e-08
gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subc... 62 6e-08
gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japo... 62 6e-08
gb|AAL86492.1|AC077693_31 putative polyprotein [Oryza sativa Jap... 62 6e-08
emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group] gi... 62 6e-08
gb|AAP55099.2| retrotransposon protein, putative, Ty3-gypsy subc... 62 6e-08
gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subc... 62 6e-08
gb|ABA93974.2| retrotransposon protein, putative, Ty3-gypsy subc... 62 6e-08
gb|ABA97778.2| retrotransposon protein, putative, Ty3-gypsy subc... 62 6e-08
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc... 62 6e-08
gb|AAX95471.1| Retrotransposon gag protein, putative [Oryza sati... 62 6e-08
gb|AAX95470.1| Retrotransposon gag protein, putative [Oryza sati... 62 6e-08
gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group] 62 6e-08
gb|AAT69650.1| putative polyprotein [Oryza sativa Japonica Group] 62 6e-08
gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group] 62 6e-08
emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group] 62 6e-08
emb|CAE04628.3| OSJNBa0028I23.10 [Oryza sativa Japonica Group] 62 6e-08
>gb|EXB28864.1| hypothetical protein L484_015797 [Morus notabilis]
Length = 406
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +2
Query: 26 EAYLIQWQ------RVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLT 187
+AY I W+ R P F G+++P +A+ W +L+ I++ +D EQEKV CAS+ L
Sbjct: 272 DAYFIFWRGLTEELRTMPLEFEGSTDPLEAEEWLTSLQTILDFMDLTEQEKVICASYVLK 331
Query: 188 GDASMWWERVRAKRPVNQMS 247
DA WWE V +R V M+
Sbjct: 332 KDARYWWETVVMRRNVATMT 351
>emb|CAE03548.2| OSJNBa0060D06.14 [Oryza sativa Japonica Group]
Length = 1458
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL + EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQYNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Group]
gi|20804440|dbj|BAB92137.1| putative polyprotein [Oryza
sativa Japonica Group] gi|52353682|gb|AAU44248.1|
putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1406
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 137 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 196
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 197 SIWWDNYMVTRP 208
>gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1360
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 118 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 177
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 178 SIWWDNYMVTRP 189
>gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>gb|AAL86492.1|AC077693_31 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SVWWDNYMVTRP 158
>emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group]
gi|38347085|emb|CAE05109.2| OSJNBa0001M07.5 [Oryza
sativa Japonica Group]
Length = 1471
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 61 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 120
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 121 SVWWDNYMVTRP 132
>gb|AAP55099.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1565
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 128 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 187
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 188 SVWWDNYMVTRP 199
>gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1595
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 158 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 217
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 218 SIWWDNYMVTRP 229
>gb|ABA93974.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1343
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SVWWDNYMVTRP 158
>gb|ABA97778.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1557
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 158 PPHQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 217
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 218 SVWWDNYMVTRP 229
>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1548
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 125 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 184
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 185 SIWWDNYMVTRP 196
>gb|AAX95471.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864031|gb|ABG22378.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1441
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>gb|AAX95470.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864030|gb|ABA91610.2| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1441
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>gb|AAT69650.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1458
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group]
Length = 1525
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SIWWDNYMVTRP 158
>emb|CAE04628.3| OSJNBa0028I23.10 [Oryza sativa Japonica Group]
Length = 1462
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 17 PRKEAYLIQWQRVKPENFSGTSEPWDAQAWFKTLERIMELLDWPEQEKVKCASFCLTGDA 196
P ++ L+++ RVKP FS T+ P +A W +E+ + LL EQEKV A+ L G A
Sbjct: 87 PPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPA 146
Query: 197 SMWWERVRAKRP 232
S+WW+ RP
Sbjct: 147 SVWWDNYMVTRP 158