BLASTX nr result
ID: Zingiber24_contig00014158
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00014158
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003564557.1| PREDICTED: ribosome assembly protein C18.05c... 68 1e-09
ref|XP_002457213.1| hypothetical protein SORBIDRAFT_03g003380 [S... 68 1e-09
gb|EMJ17998.1| hypothetical protein PRUPE_ppa023545mg, partial [... 67 2e-09
tpg|DAA53095.1| TPA: hypothetical protein ZEAMMB73_475859, parti... 67 3e-09
ref|NP_001158923.1| uncharacterized protein LOC100303822 [Zea ma... 67 3e-09
ref|XP_004302351.1| PREDICTED: uncharacterized protein LOC101297... 64 2e-08
dbj|BAJ95322.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-08
ref|XP_002517477.1| conserved hypothetical protein [Ricinus comm... 64 2e-08
ref|XP_004968486.1| PREDICTED: nuclear distribution protein nudF... 64 2e-08
gb|EOY03388.1| F-box family protein [Theobroma cacao] 63 5e-08
gb|EEE54011.1| hypothetical protein OsJ_00668 [Oryza sativa Japo... 62 1e-07
gb|EEC70075.1| hypothetical protein OsI_00688 [Oryza sativa Indi... 62 1e-07
ref|XP_006482547.1| PREDICTED: F-box/WD repeat-containing protei... 61 2e-07
ref|XP_006431092.1| hypothetical protein CICLE_v10011541mg [Citr... 61 2e-07
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c... 58 1e-06
emb|CBI22162.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_006855521.1| hypothetical protein AMTR_s00057p00209380 [A... 58 1e-06
gb|EXC32622.1| TAF5-like RNA polymerase II p300/CBP-associated f... 57 3e-06
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera] 57 3e-06
ref|XP_006338478.1| PREDICTED: uncharacterized protein LOC102593... 56 4e-06
>ref|XP_003564557.1| PREDICTED: ribosome assembly protein C18.05c-like [Brachypodium
distachyon]
Length = 490
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = -3
Query: 245 MADPPMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLF 66
M+ PP P+ RT AHC L RD+++L+M C+PL AY D VW RL+
Sbjct: 1 MSPPPPPS----GRTLVDLDGDVLAHCARHLGARDVASLAMACRPLHAAAYCDAVWYRLY 56
Query: 65 REKWSHCSVSSGAIGVREQYL 3
RE+W V GA+G+RE Y+
Sbjct: 57 REQWPFQQVPCGALGLRELYI 77
>ref|XP_002457213.1| hypothetical protein SORBIDRAFT_03g003380 [Sorghum bicolor]
gi|241929188|gb|EES02333.1| hypothetical protein
SORBIDRAFT_03g003380 [Sorghum bicolor]
Length = 487
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = -3
Query: 245 MADPPMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLF 66
M+ PP+ RT AHC G+L RD+++LSM C+PL AY D VW RLF
Sbjct: 1 MSAPPV-------RTLADLDGDVLAHCAGYLGARDVASLSMCCRPLRAAAYCDAVWYRLF 53
Query: 65 REKWSHCSVSSGAIGVREQYL 3
R++W V A+G+RE Y+
Sbjct: 54 RDQWPFEKVPCDALGIRELYI 74
>gb|EMJ17998.1| hypothetical protein PRUPE_ppa023545mg, partial [Prunus persica]
Length = 389
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = -3
Query: 257 SSGEMADPPMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVW 78
SS M++ P+ P S T C G+L +RD+SN+SMTC L +VAYSD +W
Sbjct: 7 SSSPMSENQRPSLPATSITDVNVDSLA--QCAGYLSLRDLSNMSMTCTYLKKVAYSDSIW 64
Query: 77 NRLFREKWSHCS--VSSGAIGVREQYL 3
R FRE W + +S GVRE YL
Sbjct: 65 QRWFRESWPRQTPPATSQTAGVREAYL 91
>tpg|DAA53095.1| TPA: hypothetical protein ZEAMMB73_475859, partial [Zea mays]
Length = 116
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 245 MADPPMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLF 66
M+ PP+ RT AHC G+L RD+++L+M C+PL AY D VW RLF
Sbjct: 1 MSAPPV-------RTLADLDGDVLAHCAGYLGARDVASLAMACRPLRAAAYCDAVWYRLF 53
Query: 65 REKWSHCSVSSGAIGVREQYL 3
R++W V A+G+RE Y+
Sbjct: 54 RDQWPFEKVPCDALGLRELYI 74
>ref|NP_001158923.1| uncharacterized protein LOC100303822 [Zea mays]
gi|194708122|gb|ACF88145.1| unknown [Zea mays]
Length = 486
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 245 MADPPMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLF 66
M+ PP+ RT AHC G+L RD+++L+M C+PL AY D VW RLF
Sbjct: 1 MSAPPV-------RTLADLDGDVLAHCAGYLGARDVASLAMACRPLRAAAYCDAVWYRLF 53
Query: 65 REKWSHCSVSSGAIGVREQYL 3
R++W V A+G+RE Y+
Sbjct: 54 RDQWPFEKVPCDALGLRELYI 74
>ref|XP_004302351.1| PREDICTED: uncharacterized protein LOC101297454 [Fragaria vesca
subsp. vesca]
Length = 504
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = -3
Query: 170 HCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWSH--CSVSSGAIGVREQYL 3
HC FL ++D+SN++MTCK L +VAYSD +W R F E W + +S A GVRE YL
Sbjct: 33 HCTSFLSLQDVSNMAMTCKYLQKVAYSDSIWRRNFSESWPQQTPAFASPASGVREAYL 90
>dbj|BAJ95322.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = -3
Query: 224 ACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWSHC 45
+ P RT AHC L RD+++L+M C+PL +AY D VW RL+R++W
Sbjct: 2 SAPLPGRTLVDLDGDVLAHCARHLGARDVASLAMACRPLHAIAYCDAVWYRLYRKQWPFQ 61
Query: 44 SVSSGAIGVREQYL 3
+ GA+G+RE Y+
Sbjct: 62 QMPYGALGIRELYI 75
>ref|XP_002517477.1| conserved hypothetical protein [Ricinus communis]
gi|223543488|gb|EEF45019.1| conserved hypothetical
protein [Ricinus communis]
Length = 209
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = -3
Query: 170 HCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWSHCSVSSGAIGVREQY 6
HC +L ++D+SNL++TCK L RVAYSD +W+R +RE+W V G + +RE Y
Sbjct: 18 HCANYLSLQDLSNLAITCKCLKRVAYSDSIWHRCYRERWP-LEVPGGLLSLREAY 71
>ref|XP_004968486.1| PREDICTED: nuclear distribution protein nudF 2-like [Setaria
italica]
Length = 482
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = -3
Query: 209 SRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWSHCSVSSG 30
+RT AHC G+L RD+++L+ C+PL AYSD VW RLFR++W + G
Sbjct: 6 ARTLADLDGDVLAHCAGYLGHRDVASLARACRPLRAAAYSDAVWYRLFRDQWPFEKI-RG 64
Query: 29 AIGVREQYL 3
A+G+RE Y+
Sbjct: 65 AVGLRELYI 73
>gb|EOY03388.1| F-box family protein [Theobroma cacao]
Length = 495
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -3
Query: 245 MADPPMPACPNNSRTXXXXXXXXXA-HCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRL 69
MA PP A P + T HC +L ++D+SNL++T K L +VAYSD +W
Sbjct: 1 MAAPP--ASPQQAATKITDLDEDSLAHCAAYLSLQDLSNLAITSKFLKKVAYSDSIWLHR 58
Query: 68 FREKWSHCSVSSGAIGVREQYL 3
FRE+W +SS ++GVR+ YL
Sbjct: 59 FRERWPLEMLSSSSLGVRKAYL 80
>gb|EEE54011.1| hypothetical protein OsJ_00668 [Oryza sativa Japonica Group]
Length = 512
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = -3
Query: 236 PPMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREK 57
PP PA R+ AHC L RD+++L++ C+PL AY D VW RLFR +
Sbjct: 5 PPPPA-----RSLADLDGDVLAHCARSLVARDVASLAVACRPLRASAYCDAVWYRLFRNQ 59
Query: 56 WSHCSVSSGAIGVREQYL 3
W V GA+G+RE Y+
Sbjct: 60 WPSQQVPRGALGLRELYI 77
>gb|EEC70075.1| hypothetical protein OsI_00688 [Oryza sativa Indica Group]
Length = 512
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = -3
Query: 236 PPMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREK 57
PP PA R+ AHC L RD+++L++ C+PL AY D VW RLFR +
Sbjct: 5 PPPPA-----RSLADLDGDVLAHCAHSLVARDVASLAVACRPLRASAYCDAVWYRLFRNQ 59
Query: 56 WSHCSVSSGAIGVREQYL 3
W V GA+G+RE Y+
Sbjct: 60 WPSQQVPRGALGLRELYI 77
>ref|XP_006482547.1| PREDICTED: F-box/WD repeat-containing protein sel-10-like [Citrus
sinensis]
Length = 501
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = -3
Query: 170 HCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWSHCSVSSG--AIGVREQYL 3
HC L ++DISN++M+CK VAYSD VW RLFRE+W VS + VRE YL
Sbjct: 30 HCALNLSLQDISNMAMSCKLFKHVAYSDSVWQRLFREQWPQVLVSGSLPTVRVREAYL 87
>ref|XP_006431092.1| hypothetical protein CICLE_v10011541mg [Citrus clementina]
gi|557533149|gb|ESR44332.1| hypothetical protein
CICLE_v10011541mg [Citrus clementina]
Length = 501
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = -3
Query: 170 HCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWSHCSVSSG--AIGVREQYL 3
HC L ++DISN++M+CK VAYSD VW RLFRE+W VS + VRE YL
Sbjct: 30 HCALNLSLQDISNMAMSCKLFKHVAYSDSVWQRLFREQWPQVLVSGSLPTVRVREAYL 87
>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
Length = 494
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = -3
Query: 167 CFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKW--SHCSVSSGAIGVREQYL 3
C +LD++D+SN++M+CK L VAYSD +W R F E W S S A GVRE YL
Sbjct: 18 CGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTFSQASGVRESYL 74
>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = -3
Query: 167 CFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKW--SHCSVSSGAIGVREQYL 3
C +LD++D+SN++M+CK L VAYSD +W R F E W S S A GVRE YL
Sbjct: 18 CGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTFSQASGVRESYL 74
>ref|XP_006855521.1| hypothetical protein AMTR_s00057p00209380 [Amborella trichopoda]
gi|548859287|gb|ERN16988.1| hypothetical protein
AMTR_s00057p00209380 [Amborella trichopoda]
Length = 491
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = -3
Query: 170 HCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWS-HC--SVSSGAIGVREQYL 3
HC L+++D++N+++TC+ VAYSD VWNR FRE+W C S +S G+RE YL
Sbjct: 21 HCTSSLNLQDLANMAVTCRRFRDVAYSDHVWNRRFRERWPVECTHSYNSKFGGIREAYL 79
>gb|EXC32622.1| TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L [Morus notabilis]
Length = 511
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -3
Query: 167 CFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKWSH--CSVSSGAIGVREQYL 3
C L ++D+SN++MTCK +VAYSD VW FRE W S+ S GVRE YL
Sbjct: 34 CASHLGLQDLSNMAMTCKYFKKVAYSDSVWFHWFREHWEKQATSICSQTSGVREAYL 90
>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
Length = 491
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = -3
Query: 158 FLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKW--SHCSVSSGAIGVREQYL 3
+LD++D+SN++M+CK L VAYSD +W R F E W S S A GVRE YL
Sbjct: 21 YLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTFSQASGVRESYL 74
>ref|XP_006338478.1| PREDICTED: uncharacterized protein LOC102593518 [Solanum tuberosum]
Length = 495
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -3
Query: 233 PMPACPNNSRTXXXXXXXXXAHCFGFLDIRDISNLSMTCKPLARVAYSDCVWNRLFREKW 54
P PA N+S + HC L+++D+SN++M+ K L + AYSD +W LFR++W
Sbjct: 6 PPPATGNSSTSLTDLDMDALVHCASHLNLQDVSNMAMSSKYLQKAAYSDPIWQSLFRQQW 65
Query: 53 S 51
S
Sbjct: 66 S 66