BLASTX nr result
ID: Zingiber24_contig00013936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00013936
(581 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus nota... 198 1e-48
gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [... 196 4e-48
ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotei... 194 1e-47
ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citr... 194 1e-47
ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citr... 194 1e-47
ref|XP_006306229.1| hypothetical protein CARUB_v10012046mg [Caps... 194 1e-47
ref|XP_002892521.1| U2 small nuclear ribonucleoprotein A [Arabid... 194 1e-47
ref|XP_002466092.1| hypothetical protein SORBIDRAFT_01g001040 [S... 194 1e-47
ref|XP_004235867.1| PREDICTED: U2 small nuclear ribonucleoprotei... 193 2e-47
ref|NP_001274939.1| U2 small nuclear ribonucleoprotein A'-like [... 193 2e-47
gb|EPS58597.1| hypothetical protein M569_16216, partial [Genlise... 193 3e-47
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei... 193 3e-47
ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotei... 192 4e-47
tpg|DAA52522.1| TPA: U2 small nuclear ribonucleoprotein A [Zea m... 192 4e-47
ref|XP_002299368.1| U2 small nuclear ribonucleoprotein A' [Popul... 192 4e-47
gb|ACG39955.1| U2 small nuclear ribonucleoprotein A [Zea mays] 192 4e-47
ref|NP_001141036.1| uncharacterized protein LOC100273115 [Zea ma... 192 4e-47
emb|CAA48890.1| U2 small nuclear ribonucleoprotein A' [Arabidops... 192 4e-47
ref|NP_172447.1| U2 small nuclear ribonucleoprotein A' [Arabidop... 192 5e-47
gb|ESW25023.1| hypothetical protein PHAVU_003G001500g [Phaseolus... 192 7e-47
>gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus notabilis]
Length = 315
Score = 198 bits (503), Expect = 1e-48
Identities = 103/137 (75%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPKLHSLVLTNNRLVNLAEIDPLASLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVIH
Sbjct: 121 LDNNITKKPNYRLYVIH 137
>gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [Prunus persica]
Length = 285
Score = 196 bits (498), Expect = 4e-48
Identities = 101/137 (73%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADL+WKSPHFFN +KERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLVWKSPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEFLPKLHTLILTNNRLVNLVEIDPLESLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVIH
Sbjct: 121 LDNNITKKPNYRLYVIH 137
>ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Citrus
sinensis]
Length = 286
Score = 194 bits (493), Expect = 1e-47
Identities = 101/137 (73%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
P+LNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDN+ITKKPNYRLYVIH
Sbjct: 121 LDNSITKKPNYRLYVIH 137
>ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525808|gb|ESR37114.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 286
Score = 194 bits (493), Expect = 1e-47
Identities = 101/137 (73%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
P+LNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDN+ITKKPNYRLYVIH
Sbjct: 121 LDNSITKKPNYRLYVIH 137
>ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525807|gb|ESR37113.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 282
Score = 194 bits (493), Expect = 1e-47
Identities = 101/137 (73%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
P+LNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDN+ITKKPNYRLYVIH
Sbjct: 121 LDNSITKKPNYRLYVIH 137
>ref|XP_006306229.1| hypothetical protein CARUB_v10012046mg [Capsella rubella]
gi|482574940|gb|EOA39127.1| hypothetical protein
CARUB_v10012046mg [Capsella rubella]
Length = 263
Score = 194 bits (493), Expect = 1e-47
Identities = 99/137 (72%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MV+LTADLIWKSPHFFN IKERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKL+NF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLDNF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL S+PKLQ+LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVITNNRLVNLVEIDPLASIPKLQYLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVIH
Sbjct: 121 LDNNITKKPNYRLYVIH 137
>ref|XP_002892521.1| U2 small nuclear ribonucleoprotein A [Arabidopsis lyrata subsp.
lyrata] gi|297338363|gb|EFH68780.1| U2 small nuclear
ribonucleoprotein A [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 194 bits (493), Expect = 1e-47
Identities = 99/137 (72%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MV+LTADLIWKSPHFFN IKERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL S+PKLQ+L+L
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLTL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVIH
Sbjct: 121 LDNNITKKPNYRLYVIH 137
>ref|XP_002466092.1| hypothetical protein SORBIDRAFT_01g001040 [Sorghum bicolor]
gi|241919946|gb|EER93090.1| hypothetical protein
SORBIDRAFT_01g001040 [Sorghum bicolor]
Length = 283
Score = 194 bits (493), Expect = 1e-47
Identities = 100/137 (72%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDN +TK+P+YRLYVIH
Sbjct: 121 LDNTVTKQPDYRLYVIH 137
>ref|XP_004235867.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Solanum
lycopersicum]
Length = 286
Score = 193 bits (491), Expect = 2e-47
Identities = 102/154 (66%), Positives = 106/154 (68%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN I+ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKL+FLSL
Sbjct: 61 PYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSL 120
Query: 479 LDNNITKKPNYRLYVIHXXXXXXXXXXXXXXQKE 580
L+NNITK+PNYRLYVIH QKE
Sbjct: 121 LENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKE 154
>ref|NP_001274939.1| U2 small nuclear ribonucleoprotein A'-like [Solanum tuberosum]
gi|77416949|gb|ABA81870.1| unknown [Solanum tuberosum]
Length = 286
Score = 193 bits (491), Expect = 2e-47
Identities = 102/154 (66%), Positives = 106/154 (68%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN I+ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKL+FLSL
Sbjct: 61 PYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSL 120
Query: 479 LDNNITKKPNYRLYVIHXXXXXXXXXXXXXXQKE 580
L+NNITK+PNYRLYVIH QKE
Sbjct: 121 LENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKE 154
>gb|EPS58597.1| hypothetical protein M569_16216, partial [Genlisea aurea]
Length = 240
Score = 193 bits (490), Expect = 3e-47
Identities = 102/154 (66%), Positives = 105/154 (68%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN + ERELDLRGNKI VIEN+GATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAVSERELDLRGNKIPVIENVGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
P +NRLG GEFLPK EIDPLVSLPKLQFLSL
Sbjct: 61 PLMNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLIEIDPLVSLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIHXXXXXXXXXXXXXXQKE 580
LDNNITKKPNYRLYVIH QKE
Sbjct: 121 LDNNITKKPNYRLYVIHKLKPLRVLDFRKVKQKE 154
>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
gi|296085571|emb|CBI29303.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 193 bits (490), Expect = 3e-47
Identities = 99/137 (72%), Positives = 102/137 (74%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN I+ERELDLRGNK+AVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GE+LPK EIDPL S PKLQFLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVIH
Sbjct: 121 LDNNITKKPNYRLYVIH 137
>ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1
[Cicer arietinum]
Length = 280
Score = 192 bits (489), Expect = 4e-47
Identities = 100/137 (72%), Positives = 102/137 (74%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN IKERELDLRGNKI+VIEN+GATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKISVIENIGATEDQFDTIDLSDNEIVKLENL 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKK NYRLYVIH
Sbjct: 121 LDNNITKKVNYRLYVIH 137
>tpg|DAA52522.1| TPA: U2 small nuclear ribonucleoprotein A [Zea mays]
Length = 284
Score = 192 bits (489), Expect = 4e-47
Identities = 98/137 (71%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN +KERELDLRGNKIAVIEN+GATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDN +TK+P+YRLYVIH
Sbjct: 121 LDNTVTKQPDYRLYVIH 137
>ref|XP_002299368.1| U2 small nuclear ribonucleoprotein A' [Populus trichocarpa]
gi|222846626|gb|EEE84173.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
Length = 284
Score = 192 bits (489), Expect = 4e-47
Identities = 99/137 (72%), Positives = 101/137 (73%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADL+WKSPHFFN IKERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLVWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GE+LPK EIDPL SLPKL FLSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLINNRLVNLAEIDPLASLPKLHFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVIH
Sbjct: 121 LDNNITKKPNYRLYVIH 137
>gb|ACG39955.1| U2 small nuclear ribonucleoprotein A [Zea mays]
Length = 286
Score = 192 bits (489), Expect = 4e-47
Identities = 98/137 (71%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN +KERELDLRGNKIAVIEN+GATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDN +TK+P+YRLYVIH
Sbjct: 121 LDNTVTKQPDYRLYVIH 137
>ref|NP_001141036.1| uncharacterized protein LOC100273115 [Zea mays]
gi|194702320|gb|ACF85244.1| unknown [Zea mays]
gi|414873964|tpg|DAA52521.1| TPA: hypothetical protein
ZEAMMB73_675808 [Zea mays]
Length = 261
Score = 192 bits (489), Expect = 4e-47
Identities = 98/137 (71%), Positives = 103/137 (75%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADLIWKSPHFFN +KERELDLRGNKIAVIEN+GATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL SLPKLQFLSL
Sbjct: 61 PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDN +TK+P+YRLYVIH
Sbjct: 121 LDNTVTKQPDYRLYVIH 137
>emb|CAA48890.1| U2 small nuclear ribonucleoprotein A' [Arabidopsis thaliana]
Length = 249
Score = 192 bits (489), Expect = 4e-47
Identities = 99/137 (72%), Positives = 102/137 (74%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MV+LTADLIWKSPHFFN IKERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EI PL S+PKLQ+LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIHPLASIPKLQYLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVIH
Sbjct: 121 LDNNITKKPNYRLYVIH 137
>ref|NP_172447.1| U2 small nuclear ribonucleoprotein A' [Arabidopsis thaliana]
gi|19884091|sp|P43333.2|RU2A_ARATH RecName: Full=U2
small nuclear ribonucleoprotein A'; Short=U2 snRNP A'
gi|2160183|gb|AAB60746.1| Identical to A. thaliana U2
SnRNP-specific A' protein (gb|X69137). ESTs gb|ATTS0705,
gb|ATTS0339 come from this gene [Arabidopsis thaliana]
gi|16649065|gb|AAL24384.1| SnRNP-specific A protein
[Arabidopsis thaliana] gi|23197870|gb|AAN15462.1|
SnRNP-specific A protein [Arabidopsis thaliana]
gi|332190368|gb|AEE28489.1| U2 small nuclear
ribonucleoprotein A' [Arabidopsis thaliana]
Length = 249
Score = 192 bits (488), Expect = 5e-47
Identities = 99/137 (72%), Positives = 102/137 (74%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MV+LTADLIWKSPHFFN IKERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLPK EIDPL S+PKLQ+LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKK NYRLYVIH
Sbjct: 121 LDNNITKKANYRLYVIH 137
>gb|ESW25023.1| hypothetical protein PHAVU_003G001500g [Phaseolus vulgaris]
Length = 230
Score = 192 bits (487), Expect = 7e-47
Identities = 99/137 (72%), Positives = 102/137 (74%)
Frame = +2
Query: 119 MVRLTADLIWKSPHFFNVIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 298
MVRLTADL+WKSPHFFN IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLVWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60
Query: 299 PYLNRLGXXXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXXEIDPLVSLPKLQFLSL 478
PYLNRLG GEFLP EIDPL S+PKLQFLSL
Sbjct: 61 PYLNRLGTIIINNNRITRINPSIGEFLPNLHTLVLTNNRIVNLVEIDPLASIPKLQFLSL 120
Query: 479 LDNNITKKPNYRLYVIH 529
LDNNITKKPNYRLYVI+
Sbjct: 121 LDNNITKKPNYRLYVIN 137