BLASTX nr result

ID: Zingiber24_contig00013893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013893
         (290 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307380.1| hypothetical protein POPTR_0005s17080g [Popu...    74   2e-11
gb|AFW73493.1| putative MYB DNA-binding domain superfamily prote...    73   4e-11
ref|NP_001170417.1| uncharacterized protein LOC100384404 [Zea ma...    73   4e-11
ref|XP_004953959.1| PREDICTED: transcription factor MYB39-like [...    72   8e-11
ref|XP_002452535.1| hypothetical protein SORBIDRAFT_04g027540 [S...    71   1e-10
gb|EMT13107.1| Transcription factor MYB39 [Aegilops tauschii]          70   2e-10
ref|XP_002307080.2| hypothetical protein POPTR_0005s07590g [Popu...    69   6e-10
ref|XP_002310560.2| hypothetical protein POPTR_0007s05360g [Popu...    69   6e-10
gb|EOY16000.1| Myb domain protein 93 [Theobroma cacao]                 68   1e-09
gb|EMS50780.1| Transcription factor MYB39 [Triticum urartu]            68   1e-09
ref|XP_003560902.1| PREDICTED: uncharacterized protein LOC100842...    68   1e-09
ref|XP_003570617.1| PREDICTED: uncharacterized protein LOC100822...    67   2e-09
dbj|BAJ96650.1| predicted protein [Hordeum vulgare subsp. vulgare]     67   3e-09
gb|EOX92094.1| Myb domain protein 93 [Theobroma cacao]                 66   4e-09
ref|XP_002301053.1| hypothetical protein POPTR_0002s09720g [Popu...    66   4e-09
gb|EMT11444.1| Transcription factor MYB39 [Aegilops tauschii]          64   2e-08
gb|EMS67303.1| Transcription factor MYB39 [Triticum urartu]            64   2e-08
ref|XP_002532837.1| DNA binding protein, putative [Ricinus commu...    64   3e-08
gb|EEC80245.1| hypothetical protein OsI_22196 [Oryza sativa Indi...    64   3e-08
ref|NP_001057174.1| Os06g0221000 [Oryza sativa Japonica Group] g...    63   3e-08

>ref|XP_002307380.1| hypothetical protein POPTR_0005s17080g [Populus trichocarpa]
           gi|222856829|gb|EEE94376.1| hypothetical protein
           POPTR_0005s17080g [Populus trichocarpa]
          Length = 337

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/83 (50%), Positives = 50/83 (60%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQXXXXXXX 182
           QPRTDFF +LPQLIALANL + ++  P D HA R Q EAVQ  KLQYLQ+LLQ       
Sbjct: 127 QPRTDFFDSLPQLIALANLRDLMEHRPLDEHAMRLQEEAVQLAKLQYLQYLLQ---SAAS 183

Query: 183 XXXXXXXXXXXXXDLETMSLLNS 251
                        D+E ++LLNS
Sbjct: 184 IPSTNSYGQNGITDMEVLNLLNS 206


>gb|AFW73493.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 322

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTDFF+ALPQLIALANL + V+  P D+HAAR Q EAVQA KLQ LQ LLQ
Sbjct: 127 RPRTDFFAALPQLIALANLRQLVEQRPWDDHAARIQVEAVQAAKLQCLQNLLQ 179


>ref|NP_001170417.1| uncharacterized protein LOC100384404 [Zea mays]
           gi|224035733|gb|ACN36942.1| unknown [Zea mays]
          Length = 297

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTDFF+ALPQLIALANL + V+  P D+HAAR Q EAVQA KLQ LQ LLQ
Sbjct: 102 RPRTDFFAALPQLIALANLRQLVEQRPWDDHAARIQVEAVQAAKLQCLQNLLQ 154


>ref|XP_004953959.1| PREDICTED: transcription factor MYB39-like [Setaria italica]
          Length = 325

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/53 (69%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTDFF+ALPQLIALANL + V+  P D+HAAR Q EAVQA KLQ LQ L+Q
Sbjct: 127 RPRTDFFAALPQLIALANLRQLVEQRPWDDHAARLQVEAVQAAKLQCLQNLIQ 179


>ref|XP_002452535.1| hypothetical protein SORBIDRAFT_04g027540 [Sorghum bicolor]
           gi|241932366|gb|EES05511.1| hypothetical protein
           SORBIDRAFT_04g027540 [Sorghum bicolor]
          Length = 330

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/53 (69%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTDFF+ALPQLIALANL + V+  P D+H AR Q EAVQA KLQ LQ LLQ
Sbjct: 127 RPRTDFFAALPQLIALANLRQLVEQRPWDDHTARIQVEAVQAAKLQCLQNLLQ 179


>gb|EMT13107.1| Transcription factor MYB39 [Aegilops tauschii]
          Length = 324

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQXXXXXXX 182
           +PRTDFF+ALPQLIALANL +F+   P D+H AR Q +  QA  LQY+Q LL        
Sbjct: 127 RPRTDFFAALPQLIALANLRQFITQQPLDDHTARLQAQTAQAANLQYVQSLLHSAASVAA 186

Query: 183 XXXXXXXXXXXXXDLETMSLLN-SQMTSP 266
                        DLE ++ L+  QM SP
Sbjct: 187 SPTTSSSLNSLTMDLEQINFLSPPQMLSP 215


>ref|XP_002307080.2| hypothetical protein POPTR_0005s07590g [Populus trichocarpa]
           gi|550338337|gb|EEE94076.2| hypothetical protein
           POPTR_0005s07590g [Populus trichocarpa]
          Length = 341

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTD FS+LP LIALANL E +D    + HA R QTEA Q  KLQYLQ+LLQ
Sbjct: 127 RPRTDIFSSLPHLIALANLKELIDHHSLEEHALRLQTEAAQMAKLQYLQYLLQ 179


>ref|XP_002310560.2| hypothetical protein POPTR_0007s05360g [Populus trichocarpa]
           gi|550334175|gb|EEE91010.2| hypothetical protein
           POPTR_0007s05360g [Populus trichocarpa]
          Length = 341

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTD FS+LP LIALANL E +D    + HA R QTEA Q  KLQYLQ+LLQ
Sbjct: 127 RPRTDIFSSLPHLIALANLKELIDHHSLEEHALRLQTEAAQMAKLQYLQYLLQ 179


>gb|EOY16000.1| Myb domain protein 93 [Theobroma cacao]
          Length = 336

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGW-PKDNHAARFQTEAVQATKLQYLQFLLQXXXXXX 179
           QPRTD F++LPQLIALANL + V+   P D+H  R Q EAVQ  +LQYLQFL+Q      
Sbjct: 127 QPRTDIFASLPQLIALANLRDLVESTNPLDDHTVRLQAEAVQLARLQYLQFLVQ----SA 182

Query: 180 XXXXXXXXXXXXXXDLETMSLLNSQM 257
                         D+E  +LLNS +
Sbjct: 183 ASMTNNSYSQNGIADMEAFNLLNSSV 208


>gb|EMS50780.1| Transcription factor MYB39 [Triticum urartu]
          Length = 324

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQXXXXXXX 182
           +PRTDFF+ALPQLIALANL +F++  P D+H A  Q +  QA  LQY+Q LL        
Sbjct: 127 RPRTDFFAALPQLIALANLRQFINQQPWDDHTAGLQAQTAQAANLQYVQSLLHSAASIAA 186

Query: 183 XXXXXXXXXXXXXDLETMSLLN-SQMTSP 266
                        DLE ++ L+  QM SP
Sbjct: 187 SPTTSSSLNGLTMDLEQINFLSPPQMLSP 215


>ref|XP_003560902.1| PREDICTED: uncharacterized protein LOC100842092 [Brachypodium
           distachyon]
          Length = 319

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/52 (65%), Positives = 41/52 (78%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLL 158
           +PRTDFFSALPQLIALAN  +F++  P D+  A  Q+EAVQA KLQY+Q LL
Sbjct: 127 RPRTDFFSALPQLIALANFRQFLEQQPLDDQTAWLQSEAVQAAKLQYMQSLL 178


>ref|XP_003570617.1| PREDICTED: uncharacterized protein LOC100822645 [Brachypodium
           distachyon]
          Length = 329

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/54 (66%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAA-RFQTEAVQATKLQYLQFLLQ 161
           +PRTDFF+ALPQLIALANL + V+  P D H   + QTEAVQA KL+YLQ LLQ
Sbjct: 127 RPRTDFFAALPQLIALANLRQLVEQRPWDEHTPNQLQTEAVQAAKLEYLQCLLQ 180


>dbj|BAJ96650.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 324

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQXXXXXXX 182
           +PRTDFF+ALPQLIALANL +F++  P D+H A  Q +  QA  LQY+Q LL        
Sbjct: 127 RPRTDFFAALPQLIALANLRQFINQQPWDDHTAGLQEQTAQAANLQYMQSLLHSAASIAA 186

Query: 183 XXXXXXXXXXXXXDLETMSLLN-SQMTSP 266
                        DLE ++ L+  Q+ SP
Sbjct: 187 SPTTTSSLNSLNMDLEQINFLSPPQILSP 215


>gb|EOX92094.1| Myb domain protein 93 [Theobroma cacao]
          Length = 318

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/83 (46%), Positives = 47/83 (56%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQXXXXXXX 182
           +PRTD FS+LP LIALANL E +D  P + HA R Q EAVQ  KLQ LQ+L Q       
Sbjct: 127 RPRTDIFSSLPHLIALANLKELMDHQPWEEHAVRLQAEAVQMAKLQCLQYLFQ---TPAS 183

Query: 183 XXXXXXXXXXXXXDLETMSLLNS 251
                        D+ET++L NS
Sbjct: 184 ISAGSNNINNTFTDMETINLSNS 206


>ref|XP_002301053.1| hypothetical protein POPTR_0002s09720g [Populus trichocarpa]
           gi|222842779|gb|EEE80326.1| hypothetical protein
           POPTR_0002s09720g [Populus trichocarpa]
          Length = 336

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/83 (48%), Positives = 48/83 (57%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQXXXXXXX 182
           QP TDFF++LPQL+ALANL E ++  P D HA   Q EA+Q  KLQYLQ LLQ       
Sbjct: 127 QPLTDFFASLPQLMALANLREPMEHHPLDEHAMGLQAEALQLAKLQYLQCLLQ--SAASL 184

Query: 183 XXXXXXXXXXXXXDLETMSLLNS 251
                        DLE ++LLNS
Sbjct: 185 IPSANSYDQNGITDLEVLNLLNS 207


>gb|EMT11444.1| Transcription factor MYB39 [Aegilops tauschii]
          Length = 363

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAA-RFQTEAVQATKLQYLQFLLQ 161
           +PRTDFF+ALPQLIALANL + V+  P D+ +A + Q +AVQA KL+YLQ LLQ
Sbjct: 159 RPRTDFFAALPQLIALANLRQLVEQRPWDDQSANQLQADAVQAAKLEYLQCLLQ 212


>gb|EMS67303.1| Transcription factor MYB39 [Triticum urartu]
          Length = 331

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWP-KDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTDFF+ALPQLIALANL + V+  P  D  A++ Q +AVQA KL+YLQ LLQ
Sbjct: 127 RPRTDFFAALPQLIALANLRQLVEQRPWDDQSASQLQADAVQAAKLEYLQCLLQ 180


>ref|XP_002532837.1| DNA binding protein, putative [Ricinus communis]
           gi|223527404|gb|EEF29544.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 232

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/53 (58%), Positives = 37/53 (69%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLLQ 161
           +PRTD FS+LP LIALANL E +D    + HA R Q E  Q  KLQ+LQ+LLQ
Sbjct: 9   RPRTDIFSSLPHLIALANLKELIDHRSLEEHAVRLQAEVAQMAKLQHLQYLLQ 61


>gb|EEC80245.1| hypothetical protein OsI_22196 [Oryza sativa Indica Group]
          Length = 274

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +3

Query: 3   QPRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLL 158
           +PRTDFF +LPQLIALANL + ++  P D H    QT AVQA KL+Y+Q LL
Sbjct: 81  RPRTDFFQSLPQLIALANLRQIIERQPWDGHIEGLQTVAVQAAKLEYMQSLL 132


>ref|NP_001057174.1| Os06g0221000 [Oryza sativa Japonica Group]
           gi|51535086|dbj|BAD37675.1| putative MYB family
           transcription factor [Oryza sativa Japonica Group]
           gi|113595214|dbj|BAF19088.1| Os06g0221000 [Oryza sativa
           Japonica Group]
          Length = 322

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 31/51 (60%), Positives = 37/51 (72%)
 Frame = +3

Query: 6   PRTDFFSALPQLIALANLCEFVDGWPKDNHAARFQTEAVQATKLQYLQFLL 158
           PRTDFF +LPQLIALANL + ++  P D H    QT AVQA KL+Y+Q LL
Sbjct: 128 PRTDFFQSLPQLIALANLRQIIERQPWDGHIEGLQTVAVQAAKLEYMQSLL 178


Top