BLASTX nr result

ID: Zingiber24_contig00013883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013883
         (275 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT07953.1| hypothetical protein F775_21580 [Aegilops tauschii]     58   1e-06
dbj|BAL02998.1| CO-like protein [Hordeum vulgare subsp. vulgare]       57   3e-06
dbj|BAJ89184.1| predicted protein [Hordeum vulgare subsp. vulgar...    57   3e-06
gb|AAL99271.1| CONSTANS-like protein CO9, partial [Hordeum vulga...    57   3e-06
gb|EMS68596.1| Zinc finger protein CONSTANS-LIKE 4 [Triticum ura...    57   3e-06
gb|ACI00358.1| ZCCT2-D2 [Aegilops tauschii]                            55   1e-05

>gb|EMT07953.1| hypothetical protein F775_21580 [Aegilops tauschii]
          Length = 289

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/57 (56%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
 Frame = -3

Query: 231 QIRYASRKAYAEMRPRVKGRFAKTMESTE-------SQPVEQQPYEPHDRNAFSWFQ 82
           QIRYASRKAYAEMRPRVKGRFAK  + +E        QP +   YEP  R    WF+
Sbjct: 233 QIRYASRKAYAEMRPRVKGRFAKVPDGSEGAAPSPPQQPTQAAGYEP-GRLDLGWFR 288


>dbj|BAL02998.1| CO-like protein [Hordeum vulgare subsp. vulgare]
          Length = 295

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
 Frame = -3

Query: 231 QIRYASRKAYAEMRPRVKGRFAKTMESTE-------SQPVEQQPYEPHDRNAFSWFQ 82
           QIRYASRKAYAEMRPRVKGRFAK  +  E        QP +   YEP  R    WF+
Sbjct: 239 QIRYASRKAYAEMRPRVKGRFAKVPDGGEGAAPSPPQQPTQAAGYEP-SRLDLGWFR 294


>dbj|BAJ89184.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|349500576|dbj|BAL02999.1| CO-like protein [Hordeum
           vulgare subsp. vulgare]
          Length = 295

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
 Frame = -3

Query: 231 QIRYASRKAYAEMRPRVKGRFAKTMESTE-------SQPVEQQPYEPHDRNAFSWFQ 82
           QIRYASRKAYAEMRPRVKGRFAK  +  E        QP +   YEP  R    WF+
Sbjct: 239 QIRYASRKAYAEMRPRVKGRFAKVPDGGEGAAPSPPQQPTQAAGYEP-SRLDLGWFR 294


>gb|AAL99271.1| CONSTANS-like protein CO9, partial [Hordeum vulgare subsp. vulgare]
          Length = 76

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
 Frame = -3

Query: 231 QIRYASRKAYAEMRPRVKGRFAKTMESTE-------SQPVEQQPYEPHDRNAFSWFQ 82
           QIRYASRKAYAEMRPRVKGRFAK  +  E        QP +   YEP  R    WF+
Sbjct: 20  QIRYASRKAYAEMRPRVKGRFAKVPDGGEGAAPSPPQQPTQAAGYEP-SRLDLGWFR 75


>gb|EMS68596.1| Zinc finger protein CONSTANS-LIKE 4 [Triticum urartu]
          Length = 135

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/59 (54%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
 Frame = -3

Query: 231 QIRYASRKAYAEMRPRVKGRFAKTMESTE---------SQPVEQQPYEPHDRNAFSWFQ 82
           QIRYASRKAYAEMRPRVKGRFAK  +  E          QP +   YEP  R    WF+
Sbjct: 77  QIRYASRKAYAEMRPRVKGRFAKVPDGVEGAAPSPSPPQQPTQAAGYEP-GRLDLGWFR 134


>gb|ACI00358.1| ZCCT2-D2 [Aegilops tauschii]
          Length = 213

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -3

Query: 231 QIRYASRKAYAEMRPRVKGRFAKTMESTESQPVEQQPYEPHDRNAFSWFQ 82
           QIRY SRKAYAE+RPRV GRF K  E+T S      PY+P  +    WF+
Sbjct: 165 QIRYESRKAYAELRPRVNGRFVKVPEATASPSPPTSPYDP-SKLHLGWFR 213


Top