BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013801
         (829 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB68160.1| DNA topoisomerase 2 [Morus notabilis]                  118   2e-24
dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japo...   115   2e-23
gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japo...   115   2e-23
gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indi...   115   2e-23
ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine...   106   9e-21
ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza b...   105   3e-20
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              103   6e-20
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   103   6e-20
ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus comm...   102   1e-19
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]        101   4e-19
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]        101   4e-19
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   100   5e-19
ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria...    98   3e-18
ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...    96   1e-17
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari...    96   1e-17
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...    95   3e-17
ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2-like [Brachyp...    95   3e-17
ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [S...    95   3e-17
ref|XP_002314046.2| DNA topoisomerase family protein [Populus tr...    94   6e-17
gb|EMT12025.1| hypothetical protein F775_52511 [Aegilops tauschii]     94   8e-17

>gb|EXB68160.1| DNA topoisomerase 2 [Morus notabilis]
          Length = 1451

 Score =  118 bits (296), Expect = 2e-24
 Identities = 86/216 (39%), Positives = 111/216 (51%), Gaps = 23/216 (10%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGAMETDTLVVDQEKPKKQPSRNAAAKKATYAVLSD----DEDD 662
            ALKDRLAAYNLDSSPD  + E DT       PKK P++ AAA+K T A +S+    D+DD
Sbjct: 1225 ALKDRLAAYNLDSSPDKSS-EMDTEAPQVPVPKKAPTKRAAAQKKTLATVSETVNLDDDD 1283

Query: 661  EPEHHLMPTIDELDNDDDFSINEEAPKSVKGK--GRKPRNET---------AATRKRGST 515
            +         DE+D D+DF +   AP     K  G+KP   T         AAT++RG+ 
Sbjct: 1284 D---------DEIDGDEDFELESTAPAKAAAKKGGKKPAVSTKAVSKAPAAAATKRRGAA 1334

Query: 514  QAASKANSQKPNTNV-QPATR--VSPEKKLRKMRASPFNKKSGSVLSRLT-----XXXXX 359
                +   QK  T++ +PA    +SPEKK+RKMRASPFNKKSGSVL R            
Sbjct: 1335 NKEPQVLGQKLLTDMLKPAENSGLSPEKKVRKMRASPFNKKSGSVLGRAVNIDDDDEATT 1394

Query: 358  XXXXXXSNXXXXXXXXXXXVTGRTRPKRDNRTKAIY 251
                   +              + RP+R NRT+A Y
Sbjct: 1395 ASQENSPSTSESVDDVVEVPASKARPQRANRTQARY 1430


>dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
          Length = 1525

 Score =  115 bits (287), Expect = 2e-23
 Identities = 81/161 (50%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGAMETDTLVVDQE--KPKKQPSRNAAAKKA--TYAVLSDDEDD 662
            ALKDRLAAYNLD   +  AMET+T     +  K +K+PS+  AAKKA  + AV+SDDE+D
Sbjct: 1301 ALKDRLAAYNLDDHSEDTAMETETTEEQAKGKKGRKEPSKRGAAKKAISSLAVISDDEED 1360

Query: 661  EPEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNET--AATRKRGSTQAASKANSQ 488
            E        IDE D++DDF++ E   K  KG+G+KP  E   AATRKR   Q  S     
Sbjct: 1361 ETV-----PIDE-DDEDDFAMEEVPVK--KGRGKKPAAEKPKAATRKRAPAQGKSMRQKV 1412

Query: 487  -----KPNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSR 380
                 KP T     +  SPEKK+RKMRASPF+KKSGSVL R
Sbjct: 1413 MEEMFKP-TEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQR 1452


>gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japonica Group]
          Length = 1487

 Score =  115 bits (287), Expect = 2e-23
 Identities = 81/161 (50%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGAMETDTLVVDQE--KPKKQPSRNAAAKKA--TYAVLSDDEDD 662
            ALKDRLAAYNLD   +  AMET+T     +  K +K+PS+  AAKKA  + AV+SDDE+D
Sbjct: 1263 ALKDRLAAYNLDDHSEDTAMETETTEEQAKGKKGRKEPSKRGAAKKAISSLAVISDDEED 1322

Query: 661  EPEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNET--AATRKRGSTQAASKANSQ 488
            E        IDE D++DDF++ E   K  KG+G+KP  E   AATRKR   Q  S     
Sbjct: 1323 ETV-----PIDE-DDEDDFAMEEVPVK--KGRGKKPAAEKPKAATRKRAPAQGKSMRQKV 1374

Query: 487  -----KPNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSR 380
                 KP T     +  SPEKK+RKMRASPF+KKSGSVL R
Sbjct: 1375 MEEMFKP-TEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQR 1414


>gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indica Group]
          Length = 1486

 Score =  115 bits (287), Expect = 2e-23
 Identities = 81/161 (50%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGAMETDTLVVDQE--KPKKQPSRNAAAKKA--TYAVLSDDEDD 662
            ALKDRLAAYNLD   +  AMET+T     +  K +K+PS+  AAKKA  + AV+SDDE+D
Sbjct: 1262 ALKDRLAAYNLDDHSEDTAMETETTEEQAKGKKGRKEPSKRGAAKKAISSLAVISDDEED 1321

Query: 661  EPEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNET--AATRKRGSTQAASKANSQ 488
            E        IDE D++DDF++ E   K  KG+G+KP  E   AATRKR   Q  S     
Sbjct: 1322 ETV-----PIDE-DDEDDFAMEEVPVK--KGRGKKPAAEKPKAATRKRAPAQGKSMRQKV 1373

Query: 487  -----KPNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSR 380
                 KP T     +  SPEKK+RKMRASPF+KKSGSVL R
Sbjct: 1374 MEEMFKP-TEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQR 1413


>ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine max]
          Length = 1484

 Score =  106 bits (265), Expect = 9e-21
 Identities = 69/158 (43%), Positives = 92/158 (58%), Gaps = 7/158 (4%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHG-AMETDTLVVDQEKPKKQPSRNAAAKKATYAVLSDDEDDEPE 653
            +L++RLAAYN  +S D    MET+      EK K+ P R  AAKK + A++ DD D + E
Sbjct: 1255 SLQERLAAYNFGASSDISEGMETEEPSAPAEK-KEGPKRRGAAKKKSSAIVLDDSDSDNE 1313

Query: 652  HHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNETA------ATRKRGSTQAASKANS 491
             H    +D+ D+D+DF I +      K  GRKP  + A      A RKR      S+   
Sbjct: 1314 VH---NVDDDDDDEDFEIMQPVAPGRKKGGRKPAAQNAKKAPAAAARKRNVGGKQSQFLG 1370

Query: 490  QKPNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSRL 377
            QK  T++  +T +SPEKK+RKMRASPFNKKS SVL R+
Sbjct: 1371 QKLITDMLESTGISPEKKVRKMRASPFNKKSSSVLGRV 1408


>ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza brachyantha]
          Length = 1506

 Score =  105 bits (261), Expect = 3e-20
 Identities = 76/161 (47%), Positives = 95/161 (59%), Gaps = 11/161 (6%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGAMETDTLV--VDQEKPKKQPSRNAAAKKA--TYAVLSDDEDD 662
            ALKDRLAAY LD + +  AMET+T       +K KK+PS+  AAKKA  + A LSDD++D
Sbjct: 1284 ALKDRLAAYKLDDNSEDTAMETETAEEQTKTKKGKKEPSKRGAAKKALSSLAELSDDDED 1343

Query: 661  EPEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNET--AATRKRGSTQAASKANSQ 488
              E      ID+ D ++DF++  +  K   G+GRKP  E   AATRKR   Q  S     
Sbjct: 1344 ATE-----PIDKED-EEDFAMEVQVKK---GRGRKPAAEKPKAATRKRAPAQGKSMRQKV 1394

Query: 487  -----KPNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSR 380
                 KP T     +  SPEKK+RKMR SPF+KKSGSVL R
Sbjct: 1395 MEEIFKP-TEDSSTSAPSPEKKVRKMRVSPFHKKSGSVLQR 1434


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  103 bits (258), Expect = 6e-20
 Identities = 85/216 (39%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPD-HGAMETDTLVVDQEKPKKQPSRNAAAKK---ATYAVLSDDEDDE 659
            LK+RLAAYNL+SSPD   AME +   V   + KK+PSR AAA+K   A++  +SDD++D 
Sbjct: 1232 LKERLAAYNLESSPDGSAAMEAEVPQVPAAR-KKEPSRRAAAQKKPLASFTEISDDDED- 1289

Query: 658  PEHHLMPTIDELDNDDDFSINEEAPKSVKGKG-RKPR-NETAATRKRGSTQAASK---AN 494
                          D+DF + E +   VK KG RKP  N  AA  K  +  A +K   AN
Sbjct: 1290 --------------DEDFEVEEVSASDVKKKGGRKPAANAKAAAAKPAAAAAKNKRGAAN 1335

Query: 493  SQKPNTNVQ--------PATR--VSPEKKLRKMRASPFNKKSGSVLSRL-----TXXXXX 359
             Q+P    Q        PA    +SPEKK+RKMRASPFNKKSGSVL        T     
Sbjct: 1336 KQQPQLLGQTLLTEIFKPAETLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDETAETEE 1395

Query: 358  XXXXXXSNXXXXXXXXXXXVTGRTRPKRDNRTKAIY 251
                  ++           +  RTRP+R+NR +  Y
Sbjct: 1396 NSGSASTSNSSGGESNEVVMPARTRPQRENRVQTRY 1431


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  103 bits (258), Expect = 6e-20
 Identities = 85/216 (39%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPD-HGAMETDTLVVDQEKPKKQPSRNAAAKK---ATYAVLSDDEDDE 659
            LK+RLAAYNL+SSPD   AME +   V   + KK+PSR AAA+K   A++  +SDD++D 
Sbjct: 1269 LKERLAAYNLESSPDGSAAMEAEVPQVPAAR-KKEPSRRAAAQKKPLASFTEISDDDED- 1326

Query: 658  PEHHLMPTIDELDNDDDFSINEEAPKSVKGKG-RKPR-NETAATRKRGSTQAASK---AN 494
                          D+DF + E +   VK KG RKP  N  AA  K  +  A +K   AN
Sbjct: 1327 --------------DEDFEVEEVSASDVKKKGGRKPAANAKAAAAKPAAAAAKNKRGAAN 1372

Query: 493  SQKPNTNVQ--------PATR--VSPEKKLRKMRASPFNKKSGSVLSRL-----TXXXXX 359
             Q+P    Q        PA    +SPEKK+RKMRASPFNKKSGSVL        T     
Sbjct: 1373 KQQPQLLGQTLLTEIFKPAETLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDETAETEE 1432

Query: 358  XXXXXXSNXXXXXXXXXXXVTGRTRPKRDNRTKAIY 251
                  ++           +  RTRP+R+NR +  Y
Sbjct: 1433 NSGSASTSNSSGGESNEVVMPARTRPQRENRVQTRY 1468


>ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
            gi|223543074|gb|EEF44609.1| DNA topoisomerase II,
            putative [Ricinus communis]
          Length = 1212

 Score =  102 bits (255), Expect = 1e-19
 Identities = 72/162 (44%), Positives = 95/162 (58%), Gaps = 11/162 (6%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGA-METDTLVVDQEKPKKQPSRNAAAKKATYAVLSDDEDDEPE 653
            ALKDRL AY LDSSP+    METD   + Q   +K+ S+ AAA+K   A +S+  + E  
Sbjct: 984  ALKDRLKAYRLDSSPEQSTTMETD---MPQVPARKETSKRAAAQKKPVATISELSESE-- 1038

Query: 652  HHLMPTIDELDNDDDFSINE-EAPKSVKGKGRKPRNET------AATRKRGSTQAASKAN 494
                   DE+D DD+  +     P++ K  GRKP   +      A T+KRG T+  S+  
Sbjct: 1039 -------DEVDLDDESDVEVVPVPEAKKKGGRKPAANSRAAKPPAGTKKRGPTKKESQGL 1091

Query: 493  SQKPNTNV-QPATR--VSPEKKLRKMRASPFNKKSGSVLSRL 377
             QK  T + +PA    +SPEKK+RKMRASPFNKKSGSVL R+
Sbjct: 1092 GQKLLTEMLKPAENPGISPEKKVRKMRASPFNKKSGSVLGRV 1133


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score =  101 bits (251), Expect = 4e-19
 Identities = 88/213 (41%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPDHGA-METDTLVVDQEKPKKQPS-RNAAAKKATYAVLSDDEDDEPE 653
            L++RLA YNLDSSPDH A MET+  V      KK+PS R AAA+K     LS+       
Sbjct: 1064 LRERLAKYNLDSSPDHSAAMETE--VPQVPAGKKEPSKRAAAARKKPATSLSE------- 1114

Query: 652  HHLMPTIDELD-NDDDFSINE----EAPKSVKGKGRKPRNET-------AATRKRGSTQA 509
              +  +I E+D ND+D  + E     AP   KG GRKP   +       AA +KRG   A
Sbjct: 1115 --ISESIGEIDINDEDLEVVEVAAAAAPAGKKG-GRKPAANSKAAAKPPAAAKKRGPAAA 1171

Query: 508  ASKANSQKPNTNV-QPA--TRVSPEKKLRKMRASPFNKKSGSVLSR----LTXXXXXXXX 350
              K+  QK  T + +PA  + +SPEKK+RKMRASPFNKKSGSVL R    L         
Sbjct: 1172 GKKSQQQKLLTEMLKPAEDSGISPEKKVRKMRASPFNKKSGSVLGRVGKELESTTDSEET 1231

Query: 349  XXXSNXXXXXXXXXXXVTGRTRPKRDNRTKAIY 251
               S+           V  R RP+R NR +  Y
Sbjct: 1232 FGSSSMSADTEEVTEIVPARPRPQRTNRKQTTY 1264


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score =  101 bits (251), Expect = 4e-19
 Identities = 88/213 (41%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPDHGA-METDTLVVDQEKPKKQPS-RNAAAKKATYAVLSDDEDDEPE 653
            L++RLA YNLDSSPDH A MET+  V      KK+PS R AAA+K     LS+       
Sbjct: 1252 LRERLAKYNLDSSPDHSAAMETE--VPQVPAGKKEPSKRAAAARKKPATSLSE------- 1302

Query: 652  HHLMPTIDELD-NDDDFSINE----EAPKSVKGKGRKPRNET-------AATRKRGSTQA 509
              +  +I E+D ND+D  + E     AP   KG GRKP   +       AA +KRG   A
Sbjct: 1303 --ISESIGEIDINDEDLEVVEVAAAAAPAGKKG-GRKPAANSKAAAKPPAAAKKRGPAAA 1359

Query: 508  ASKANSQKPNTNV-QPA--TRVSPEKKLRKMRASPFNKKSGSVLSR----LTXXXXXXXX 350
              K+  QK  T + +PA  + +SPEKK+RKMRASPFNKKSGSVL R    L         
Sbjct: 1360 GKKSQQQKLLTEMLKPAEDSGISPEKKVRKMRASPFNKKSGSVLGRVGKELESTTDSEET 1419

Query: 349  XXXSNXXXXXXXXXXXVTGRTRPKRDNRTKAIY 251
               S+           V  R RP+R NR +  Y
Sbjct: 1420 FGSSSMSADTEEVTEIVPARPRPQRTNRKQTTY 1452


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  100 bits (250), Expect = 5e-19
 Identities = 73/163 (44%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGA--METDTLVVDQEKPKKQPSRNAAAKKATYAVLSDDEDDEP 656
            ALKDRLAAYNL+SSPDH A  MET+      +  KK P+R AAAKK T   ++D  + E 
Sbjct: 1256 ALKDRLAAYNLNSSPDHSAEAMETEA----PKAQKKAPTRKAAAKKKTLPSIADVSEGED 1311

Query: 655  EHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNETAAT-------RKRGSTQAASKA 497
            E  +        +DDD S  E A    K  GRKP    AA        +KRG     +  
Sbjct: 1312 EIEI--------SDDDESEPEVAVGGKKKGGRKPATAKAAPAAAKQPPKKRGPANKQAVG 1363

Query: 496  NSQKPNTNV-QPATRV---SPEKKLRKMRASPFNKKSGSVLSR 380
              QK  T++ +PA      SPEKK+RKMRASPFN+KSG+VL +
Sbjct: 1364 IGQKLITSILKPAENTDNSSPEKKVRKMRASPFNEKSGAVLGK 1406


>ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria italica]
          Length = 1480

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 72/157 (45%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
 Frame = -1

Query: 826  LKDRLAAYNL-DSSPDHGAMETDTLVVD-QEKPKKQPSRNAAAKKAT--YAVLSDDEDDE 659
            LK+RLAA+NL DSSPD+ AMET+T       K KK  S+    KKA+   AV+ DDED+ 
Sbjct: 1270 LKERLAAFNLNDSSPDNSAMETETTEEQIGGKGKKGVSKRGGGKKASSSLAVIHDDEDE- 1328

Query: 658  PEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKP----RNETAATRKRGSTQAASKANS 491
                        D D    + EE     KG+GRKP    + +  ATRKR   Q   KA  
Sbjct: 1329 ------------DVDVSLEVPEEVQGPKKGRGRKPAAPVKPKATATRKRAPAQG--KAMM 1374

Query: 490  QKPNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSR 380
             KP T     +  SPEKK+RKMR SPFNKKSGS+L R
Sbjct: 1375 LKP-TEDSNTSAPSPEKKVRKMRESPFNKKSGSILQR 1410


>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 70/193 (36%), Positives = 99/193 (51%), Gaps = 43/193 (22%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPDHGAMETDTLVVDQEKPKKQPSRNAAAK-KATYAVLSDDE------ 668
            L  RLA YN++SSP+H  METD         +++PS+ A +K +  YA +SDDE      
Sbjct: 1260 LNARLAKYNIESSPEHADMETDL------PERREPSKRAVSKPQQVYADISDDESEHLEE 1313

Query: 667  ----------DDEPE---------------HHLMPTIDE--LDNDDDFSI----NEEAPK 581
                      D++P+                 +  + DE  + +D+D S+     E+AP 
Sbjct: 1314 IEEEKEEEQEDEDPKPAKGKKKQAPKPKEKKKMDGSSDEEFVISDEDLSVFDIETEDAPP 1373

Query: 580  SVKGKGRKPRNE-----TAATRKRGSTQAASKANSQKPNTNVQPATRVSPEKKLRKMRAS 416
              KG+ +KP +      T A +KRG+  +     +QK  T V     VSPEKK+RKMRAS
Sbjct: 1374 KPKGRAKKPLSNKPKAPTGAAKKRGAASSKQPILNQKLITEVLKPVGVSPEKKVRKMRAS 1433

Query: 415  PFNKKSGSVLSRL 377
            PFNKKSGSVL R+
Sbjct: 1434 PFNKKSGSVLGRI 1446


>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
          Length = 1469

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 71/168 (42%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPDHGAMETDTLVVDQEKPKKQPSRNAAAKKATYAVLSDDEDDEPEHH 647
            LKDRLAAYNLDSSPD           + E P K   +  A+KKAT   L DDEDD+    
Sbjct: 1269 LKDRLAAYNLDSSPDK----------ETEVPLKPAQKKEASKKAT---LKDDEDDD---- 1311

Query: 646  LMPTIDELDNDDDFSIN-EEAPKSVKGKGRKPRNET---------AATRKRGS-----TQ 512
                      DDDF +    AP +VK  GRKP              A +KRG+     TQ
Sbjct: 1312 ----------DDDFEVEIAAAPAAVKKGGRKPAGAAKAAAAAKPPVAAKKRGAAAKKDTQ 1361

Query: 511  AASKANSQKPNTNVQPATR---VSPEKKLRKMRASPFNKKSGSVLSRL 377
             +S +  +     ++PA     VSP+ K+RKMR SPFNKKSGSVLSR+
Sbjct: 1362 TSSSSGQKLLTDMLKPAAESSGVSPDPKVRKMRESPFNKKSGSVLSRV 1409


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 69/160 (43%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPDHG---AMETDTLVVDQEKPKK-QPSRNAAAKKATYAVLSDDEDDE 659
            LKDRLAAY ++SSP+     AMET+   V Q+  KK +PS+ A AKK T A  +      
Sbjct: 1239 LKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQI---- 1294

Query: 658  PEHHLMPTIDELDNDDDFSINEEAPKSVK---GKGRKPRNETAATRKRGSTQAASKANSQ 488
                   +I + DND DF I E  P + K   G+G   R   A   K     AA     Q
Sbjct: 1295 -------SISDDDNDGDFEIKEVDPPAAKKGGGRGGGGRKAAAGNSKTTKPPAAGAKLGQ 1347

Query: 487  KPNTNV-QPATR---VSPEKKLRKMRASPFNKKSGSVLSR 380
            K  T + +PA     +SPEKK+RK+RASPFNKKSGS+L R
Sbjct: 1348 KLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGR 1387


>ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2-like [Brachypodium distachyon]
          Length = 1494

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 71/161 (44%), Positives = 86/161 (53%), Gaps = 11/161 (6%)
 Frame = -1

Query: 826  LKDRLAAYNLDSSPDHGAMETDTLVVDQEKPKK---QPSRNAAAKKA--TYAVLSDDEDD 662
            LKDRLAA NLDSSP+H  MET+T     EK KK   +PS   AAKKA  + A  SD+ED 
Sbjct: 1277 LKDRLAASNLDSSPEHIDMETET-TEGPEKGKKGVDEPSNRGAAKKAMSSLADWSDEEDL 1335

Query: 661  EPEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNETAATRKRGSTQAASKANSQK- 485
                H        +++D+    EE     K +GRKP  E +    R    A SK   QK 
Sbjct: 1336 TAPIH--------ESEDEGFAMEEVQVEKKTRGRKPAAEKSKPAVRKRAPAQSKGMRQKV 1387

Query: 484  -----PNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSRL 377
                   T+    +  SP KK+RKMRASPFNKKSGSV  R+
Sbjct: 1388 MEEIFKPTDDSTTSAPSPVKKVRKMRASPFNKKSGSVFQRV 1428


>ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [Sorghum bicolor]
            gi|241932530|gb|EES05675.1| hypothetical protein
            SORBIDRAFT_04g030880 [Sorghum bicolor]
          Length = 1452

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 68/160 (42%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
 Frame = -1

Query: 829  ALKDRLAAYNL-DSSPDHGAMETDTLVVDQEK-PKKQPSRNAAAKKATYAVLSDDEDDEP 656
            ALKDRLA +N+ DSSPD+ AMET+      EK   K PS+    KKA  + L   + D  
Sbjct: 1240 ALKDRLADFNINDSSPDYSAMETEITEEQNEKLATKGPSKRGGGKKAVSSSLVMIQSD-- 1297

Query: 655  EHHLMPTIDELDNDDDFSINE--EAPKSVKGKGRKP----RNETAATRKRGSTQAASKAN 494
                       D DDDF++ E  E     KG+G+KP    + +  A RKR   Q   KA 
Sbjct: 1298 -----------DEDDDFTLEEVSEVQAQKKGRGKKPAAAVKPKAPAPRKRAPAQG--KAT 1344

Query: 493  SQKPNTNVQPA--TRVSPEKKLRKMRASPFNKKSGSVLSR 380
             +K +  +Q       SPEKK+RKMR SPFNKKSGS+L R
Sbjct: 1345 QKKIDEMLQGIEDNNTSPEKKVRKMRPSPFNKKSGSILQR 1384


>ref|XP_002314046.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550331162|gb|EEE88001.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1482

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 71/165 (43%), Positives = 92/165 (55%), Gaps = 14/165 (8%)
 Frame = -1

Query: 829  ALKDRLAAYNLDSSPDHGA-METDTLVVDQEKPKKQPSRNAAAKK---ATYAVLSDDEDD 662
            +LKDRL AY LDSSP+  A METD L V        P+R  AA+K   A  +V+SD ED+
Sbjct: 1271 SLKDRLNAYRLDSSPEQSADMETDVLQV--------PARRGAARKKPLANVSVISDSEDE 1322

Query: 661  EPEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPR-------NETAATRKRGSTQAAS 503
                        LD+D D  + +  P++ K  GRK            AAT++RG     S
Sbjct: 1323 P----------NLDDDADVEV-KALPETKKKGGRKAAAANDKAAKPPAATKRRGPASQQS 1371

Query: 502  KANSQKPNTNV-QPA--TRVSPEKKLRKMRASPFNKKSGSVLSRL 377
            +   QK  T + +PA    +SPEKK+RK+RASPFNKKSGSVL R+
Sbjct: 1372 QGLGQKLLTEMLKPAEGAGISPEKKVRKVRASPFNKKSGSVLGRI 1416


>gb|EMT12025.1| hypothetical protein F775_52511 [Aegilops tauschii]
          Length = 1498

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 71/163 (43%), Positives = 90/163 (55%), Gaps = 13/163 (7%)
 Frame = -1

Query: 826  LKDRLAAYNLDS--SPDHGAMETDTLVVDQEKPKKQ---PSRNAAAKKA--TYAVLSDDE 668
            LKDRLAAYN+DS  SP+  AMET+    +Q+K KK    PS+  AAKKA  + A +SD++
Sbjct: 1287 LKDRLAAYNIDSDNSPEPSAMETE----EQQKGKKGWNGPSKRGAAKKAMSSLAEISDED 1342

Query: 667  DDEPEHHLMPTIDELDNDDDFSINEEAPKSVKGKGRKPRNETAATRKRGSTQAASKANSQ 488
              EP+H            DD   + E  K  K KGRKP  E   T  R    A +K   Q
Sbjct: 1343 VAEPDHE----------SDDGGSSMEVEK--KTKGRKPAAEKLKTTIRKRAPAQTKGMRQ 1390

Query: 487  K------PNTNVQPATRVSPEKKLRKMRASPFNKKSGSVLSRL 377
            K        T+    +  SPEKK+R++R SPFNKKSGSVL R+
Sbjct: 1391 KVMEEIFKPTDDSTLSAPSPEKKVRRIRDSPFNKKSGSVLHRM 1433