BLASTX nr result

ID: Zingiber24_contig00013636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013636
         (497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT17997.1| hypothetical protein F775_29712 [Aegilops tauschii]     64   3e-08
ref|NP_001147669.1| GATA transcription factor 9 [Zea mays] gi|19...    64   3e-08
ref|XP_006662592.1| PREDICTED: GATA transcription factor 2-like ...    61   1e-07
ref|XP_003574323.1| PREDICTED: GATA transcription factor 2-like ...    59   5e-07
gb|EXB37576.1| GATA transcription factor 2 [Morus notabilis]           59   7e-07
gb|AAK55449.1|AC069300_4 putative transcription factor [Oryza sa...    59   7e-07
gb|EAZ16946.1| hypothetical protein OsJ_32427 [Oryza sativa Japo...    59   7e-07
ref|XP_004983678.1| PREDICTED: GATA transcription factor 2-like ...    59   9e-07
gb|EMS50390.1| hypothetical protein TRIUR3_32323 [Triticum urartu]     59   9e-07
ref|XP_002464939.1| hypothetical protein SORBIDRAFT_01g029170 [S...    57   3e-06

>gb|EMT17997.1| hypothetical protein F775_29712 [Aegilops tauschii]
          Length = 237

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 62/187 (33%), Positives = 78/187 (41%), Gaps = 27/187 (14%)
 Frame = +2

Query: 2   AKEWEM-MDFTMGVGMXXXXXXXXXXXXXXXXXXXXY------LYGSIPPI-----VDEL 145
           A EWEM M   +G+GM                    Y       YG  P       VDEL
Sbjct: 2   ASEWEMAMGVELGMGMGSYHNASNVHAAPMGHQAGGYAAAAHHFYGMQPMRDANMRVDEL 61

Query: 146 LDLSPQQHEDCFPSMEGVAPGGATPYFSEFKPLQG------PKSSSSSF---------DL 280
           LD       D FP+    AP  A  +        G      P ++SS           + 
Sbjct: 62  LDFPTAGAHDFFPA----APDNALHHHHHLGAGVGELSATTPSATSSDHQTSMLSFADEF 117

Query: 281 YIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREATTPSRADHSTSVSAVW 460
           YIP  EEAAELEWLSKFVDDS+SD+P  +S   A +A A        S A   + V+A++
Sbjct: 118 YIPS-EEAAELEWLSKFVDDSYSDMPNYSSAAHAAMAAANAANNGGGSSAGQDSCVTALF 176

Query: 461 SSLVAPV 481
           S + A V
Sbjct: 177 SVVTALV 183


>ref|NP_001147669.1| GATA transcription factor 9 [Zea mays] gi|195612988|gb|ACG28324.1|
           GATA transcription factor 9 [Zea mays]
           gi|224033251|gb|ACN35701.1| unknown [Zea mays]
           gi|238014232|gb|ACR38151.1| unknown [Zea mays]
           gi|413955233|gb|AFW87882.1| putative GATA transcription
           factor family protein [Zea mays]
          Length = 373

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 53/139 (38%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
 Frame = +2

Query: 107 YLYGSIPPI-----VDELLDLSPQ---QHEDCFPSM-----EGVAPGGATPYFSEFKPLQ 247
           + YG +PP+     VD+LLDLS      HE  FP+      +G    GA    S      
Sbjct: 56  HYYGGMPPMGDAMRVDDLLDLSTPGAGAHE-FFPTAAPATDKGHHSSGAMGEPSPTANSS 114

Query: 248 GPKSSSSSF--DLYIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREATTP 421
             ++S+ SF  + YIP  EEAAELEWLSKFVDDS+SD+P  +S   A +A A    A   
Sbjct: 115 DHRTSALSFADEFYIPT-EEAAELEWLSKFVDDSYSDMPNYSSATHAAMAAAAAAAANAA 173

Query: 422 SRADHSTSVSAVWSSLVAP 478
                +TS         AP
Sbjct: 174 GNGGGTTSAGQDSGVAAAP 192


>ref|XP_006662592.1| PREDICTED: GATA transcription factor 2-like [Oryza brachyantha]
          Length = 228

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 47/107 (43%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
 Frame = +2

Query: 134 VDELLDLS--PQQHEDCFPSMEGVAPG-GATPYFSEFKPLQGPKSSSSSFD--------- 277
           VDELLDLS  P  H D FP+    A G G   +        G  S ++S D         
Sbjct: 65  VDELLDLSNTPGAH-DFFPAASAAAGGKGHNGHHHHHIGAMGEPSGATSSDHQTSMLSFA 123

Query: 278 --LYIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREA 412
              YIP  EEAAELEWLSKFVDDS+SD+P   S   A +A A    A
Sbjct: 124 DDFYIPT-EEAAELEWLSKFVDDSYSDLPNYQSSAHAAMAAAAAASA 169


>ref|XP_003574323.1| PREDICTED: GATA transcription factor 2-like [Brachypodium
           distachyon]
          Length = 361

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 53/177 (29%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
 Frame = +2

Query: 2   AKEWEM---MDFTMGVGMXXXXXXXXXXXXXXXXXXXXYLYGSIPPI--------VDELL 148
           A EWE+   ++  MG+G                     Y +  + P+        VDELL
Sbjct: 2   ASEWEIAMGVELGMGMGAYNTTSSAGAAAPMGHHAGGGYHFYGMQPMGAADPSMRVDELL 61

Query: 149 DLSPQQH--EDCFPSMEG---------VAPGGATPYFSEFKPLQGPKSSSSSF----DLY 283
           DLS       D FP+            + PG   P  +           +S      + Y
Sbjct: 62  DLSSAGAGAHDFFPAAAADNGHYHYHHLGPGVGEPSAATTPSATSSDHQTSMLSFADEFY 121

Query: 284 IPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREATTPSRADHSTSVSA 454
           IP  EEAAELEWLSKFVDDS+SD+P  +S   A +A A    + +P+   H + ++A
Sbjct: 122 IPS-EEAAELEWLSKFVDDSYSDMPNYSSAAHAAMAKAAAAASNSPA-GQHGSCITA 176


>gb|EXB37576.1| GATA transcription factor 2 [Morus notabilis]
          Length = 385

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
 Frame = +2

Query: 134 VDELLDLSPQQHEDCFPSMEGVAPGGATPYFSEFKPLQGPKSSSSSF------DLYIPQC 295
           +D+LLD S   ++D F S+   +      + +   PL    SSSS+       DL +P  
Sbjct: 14  IDDLLDFS---NDDLFSSISHSSDAADLHHHNHLPPLPPTASSSSTAPTDFTNDLCVPPS 70

Query: 296 EEAAELEWLSKFVDDSFSDVP 358
           ++AA+LEWLS+FVDDSFSD+P
Sbjct: 71  DDAADLEWLSRFVDDSFSDIP 91


>gb|AAK55449.1|AC069300_4 putative transcription factor [Oryza sativa Japonica Group]
           gi|31433473|gb|AAP54978.1| GATA zinc finger family
           protein, expressed [Oryza sativa Japonica Group]
           gi|125532920|gb|EAY79485.1| hypothetical protein
           OsI_34613 [Oryza sativa Indica Group]
          Length = 387

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 22/115 (19%)
 Frame = +2

Query: 134 VDELLDLS--PQQHEDCFPSMEGVA------------------PGGATPYFSEFKPLQGP 253
           VD+LLDLS  P  H D FP+    A                  P GATP  +        
Sbjct: 70  VDDLLDLSNTPGAH-DFFPASAAAAAAGDHGHHHHHHIGGMGEPSGATPSATS----SDH 124

Query: 254 KSSSSSF--DLYIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREA 412
           ++S  SF  D YIP  E+AAELEWLSKFVDDS+SD+P   S   A +A A    A
Sbjct: 125 QTSMLSFADDFYIPT-EDAAELEWLSKFVDDSYSDMPNYQSSAHAAMAAAAASAA 178


>gb|EAZ16946.1| hypothetical protein OsJ_32427 [Oryza sativa Japonica Group]
          Length = 388

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 22/115 (19%)
 Frame = +2

Query: 134 VDELLDLS--PQQHEDCFPSMEGVA------------------PGGATPYFSEFKPLQGP 253
           VD+LLDLS  P  H D FP+    A                  P GATP  +        
Sbjct: 70  VDDLLDLSNTPGAH-DFFPASAAAAAAGDHGHHHHHHIGGMGEPSGATPSATS----SDH 124

Query: 254 KSSSSSF--DLYIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREA 412
           ++S  SF  D YIP  E+AAELEWLSKFVDDS+SD+P   S   A +A A    A
Sbjct: 125 QTSMLSFADDFYIPT-EDAAELEWLSKFVDDSYSDMPNYQSSAHAAMAAAAASAA 178


>ref|XP_004983678.1| PREDICTED: GATA transcription factor 2-like [Setaria italica]
          Length = 367

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 45/109 (41%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
 Frame = +2

Query: 113 YGSIPPI-----VDELLDLSPQQH-EDCFPSMEGVAP---GGATPYFSEFKPLQGPKSSS 265
           Y  +PP+     VDELLDLS      D FP+  G A    G  +    E  P        
Sbjct: 52  YYGMPPMGDAMRVDELLDLSTGAGAHDFFPTAAGAAAADNGHHSGAMGEPSPTANSSDHQ 111

Query: 266 SSF-----DLYIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPA 397
           +S      + YIP  EEAAELEWLSKFVDDS+SD+P  +S      A A
Sbjct: 112 TSLLSFADEFYIPS-EEAAELEWLSKFVDDSYSDMPNYSSHAAMAAAAA 159


>gb|EMS50390.1| hypothetical protein TRIUR3_32323 [Triticum urartu]
          Length = 311

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 58/179 (32%), Positives = 72/179 (40%), Gaps = 27/179 (15%)
 Frame = +2

Query: 2   AKEWEM-MDFTMGVGMXXXXXXXXXXXXXXXXXXXXY------LYGSIPPI-----VDEL 145
           A EWEM M   +G+GM                    Y       YG  P       VDEL
Sbjct: 111 ASEWEMAMGVELGMGMGSYHNASNVHAAPMGHQAGGYSAAAHHFYGMQPMRDASMRVDEL 170

Query: 146 LDLSPQQHEDCFPSMEGVAPGGATPYFSEFKPLQG------PKSSSSSF---------DL 280
           LD       D FP+    AP     +        G      P ++SS           + 
Sbjct: 171 LDFPTAGAHDFFPA----APDNGLHHHHHLGAGVGELSATTPSATSSDHQTSMLSFADEF 226

Query: 281 YIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREATTPSRADHSTSVSAV 457
           YIP  EEAAELEWLSKFVDDS+SD+P  +S   A +A A        S A   + V+A+
Sbjct: 227 YIPS-EEAAELEWLSKFVDDSYSDMPNYSSAAHAAMAAANAANNGGGSSAGQDSCVTAL 284


>ref|XP_002464939.1| hypothetical protein SORBIDRAFT_01g029170 [Sorghum bicolor]
           gi|241918793|gb|EER91937.1| hypothetical protein
           SORBIDRAFT_01g029170 [Sorghum bicolor]
          Length = 384

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/117 (37%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
 Frame = +2

Query: 113 YGSIPPI------VDELLDLSPQQH---EDCFPSMEGVAPGGATPY---FSEFKPLQGPK 256
           Y  +PP+      VD+LLDLS        D FP+       G   +     E  P     
Sbjct: 54  YYGMPPMGGDAMRVDDLLDLSTGAGAGAHDFFPTAAAATDKGHQHHSGAMGEPSPTANSS 113

Query: 257 SSSSSF-----DLYIPQCEEAAELEWLSKFVDDSFSDVPYCNSGLGAVIAPATKREA 412
              +S      + YIP  EEAAELEWLSKFVDDS+SD+P  +S   A +A A    A
Sbjct: 114 DHQTSLLSFADEFYIPS-EEAAELEWLSKFVDDSYSDMPNYSSAAHAAMAAAAAANA 169


Top