BLASTX nr result

ID: Zingiber24_contig00013459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013459
         (1025 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310972.1| hypothetical protein POPTR_0008s01440g [Popu...    60   2e-06
ref|XP_004499609.1| PREDICTED: DNA ligase 1-like [Cicer arietinum]     58   7e-06
ref|XP_006582405.1| PREDICTED: hepatoma-derived growth factor-re...    57   9e-06
ref|XP_003523936.1| PREDICTED: titin-like [Glycine max]                57   9e-06

>ref|XP_002310972.1| hypothetical protein POPTR_0008s01440g [Populus trichocarpa]
           gi|222850792|gb|EEE88339.1| hypothetical protein
           POPTR_0008s01440g [Populus trichocarpa]
          Length = 370

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 31/93 (33%), Positives = 51/93 (54%)
 Frame = +3

Query: 69  YQDISPLTEHTETVESHVLRVHLPDFSSKDIRVRIDKNSTKLLVWCRKPLAQTTIARVEL 248
           Y+D  P +E  E    +VLR+HLPDF  + +++    +S  + V   +PL+    +R   
Sbjct: 15  YEDCQPKSEWKEEEGENVLRIHLPDFLKEQLKITYVHSSRIVRVTGERPLSYNKWSRFNQ 74

Query: 249 ELDVPKDADVGQIRWGFEQGWLSLSMPKKRITQ 347
              VP++ +V +I+  F  G LS++MPK  I Q
Sbjct: 75  TFPVPQNCEVNKIQGKFHDGILSITMPKATIKQ 107


>ref|XP_004499609.1| PREDICTED: DNA ligase 1-like [Cicer arietinum]
          Length = 415

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +3

Query: 66  IYQDISPLTEHTETVESHVLRVHLPD-FSSKDIRVRIDKNSTKLLVWCRKPLAQTTIARV 242
           IY+D+ P  E  +T ESH+L VH+PD F   DI  R++ +  ++ V+  K +    + R 
Sbjct: 9   IYKDLQPKIEIKDTPESHLLLVHIPDGFERGDIGARVEYDFGRVRVFGEKSIGSNKMIRF 68

Query: 243 ELELDVPKDADVGQIRWGFEQGWLSLSMPK 332
             +  VP   D+G+I+  F+   ++++MPK
Sbjct: 69  IEKYQVPSHCDIGKIKGKFDGKIVTITMPK 98


>ref|XP_006582405.1| PREDICTED: hepatoma-derived growth factor-related protein 2-like
           [Glycine max]
          Length = 385

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 30/99 (30%), Positives = 54/99 (54%)
 Frame = +3

Query: 45  RGQPKQVIYQDISPLTEHTETVESHVLRVHLPDFSSKDIRVRIDKNSTKLLVWCRKPLAQ 224
           RG   + +Y+   P +E  E  E++ L ++LP F  + I++    +S  + V   +PL  
Sbjct: 15  RGPSIRPVYETFEPKSEMKEKEEAYFLHIYLPGFVKEKIKINFVGSSRVVRVAGERPLGG 74

Query: 225 TTIARVELELDVPKDADVGQIRWGFEQGWLSLSMPKKRI 341
             I+  E    VP++ +VG+++  +E G L ++MPKK I
Sbjct: 75  NRISNFEQAYPVPENCEVGKLQGKYELGTLIITMPKKPI 113


>ref|XP_003523936.1| PREDICTED: titin-like [Glycine max]
          Length = 372

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 29/99 (29%), Positives = 55/99 (55%)
 Frame = +3

Query: 45  RGQPKQVIYQDISPLTEHTETVESHVLRVHLPDFSSKDIRVRIDKNSTKLLVWCRKPLAQ 224
           RG   + +Y+   P++E  E  E++ L ++LP F  + I++   ++S  + V   +PL  
Sbjct: 15  RGPSIRPVYETFEPMSEMKEKEEAYFLHIYLPGFVKEKIKINFVRSSRVVRVVGERPLGG 74

Query: 225 TTIARVELELDVPKDADVGQIRWGFEQGWLSLSMPKKRI 341
             I+  E    VP++ +V +++  +E G L ++MPKK I
Sbjct: 75  NRISNFEQTYPVPENCEVEKLQGKYELGTLIITMPKKPI 113


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