BLASTX nr result

ID: Zingiber24_contig00013311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013311
         (325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    61   2e-07
gb|EXB67245.1| DEAD-box ATP-dependent RNA helicase 35 [Morus not...    59   5e-07
ref|XP_006858127.1| hypothetical protein AMTR_s00062p00113470 [A...    59   9e-07
ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   2e-06
ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citr...    58   2e-06
gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus pe...    57   2e-06
ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
ref|XP_004496330.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   4e-06
ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    55   7e-06

>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
           vinifera] gi|147861063|emb|CAN78736.1| hypothetical
           protein VITISV_003102 [Vitis vinifera]
           gi|297743544|emb|CBI36411.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/63 (53%), Positives = 41/63 (65%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           +PV KRRAMEA ++LQRK                  +  +AEAKPSLLVKASQLKR+LPE
Sbjct: 11  IPVKKRRAMEAQRILQRKGKSSALEDEAE-------KSKLAEAKPSLLVKASQLKRDLPE 63

Query: 316 VSP 324
           +SP
Sbjct: 64  ISP 66


>gb|EXB67245.1| DEAD-box ATP-dependent RNA helicase 35 [Morus notabilis]
          Length = 587

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/63 (57%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VPV KRRAMEA K+LQRK                  +   AEAKPSLLVKASQLKRE PE
Sbjct: 11  VPVAKRRAMEAQKILQRKGKSSALEEELE-------KSKQAEAKPSLLVKASQLKREAPE 63

Query: 316 VSP 324
           +SP
Sbjct: 64  ISP 66


>ref|XP_006858127.1| hypothetical protein AMTR_s00062p00113470 [Amborella trichopoda]
           gi|548862230|gb|ERN19594.1| hypothetical protein
           AMTR_s00062p00113470 [Amborella trichopoda]
          Length = 593

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/63 (53%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VPV KRR MEA K+LQRK                  +  + EAKPSLLVKASQLK+ELPE
Sbjct: 18  VPVKKRRMMEAQKILQRKGKSSALEDAE--------QAKLTEAKPSLLVKASQLKKELPE 69

Query: 316 VSP 324
           +SP
Sbjct: 70  ISP 72


>ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform X1
           [Citrus sinensis] gi|568878211|ref|XP_006492097.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
           isoform X2 [Citrus sinensis]
           gi|568878213|ref|XP_006492098.1| PREDICTED: DEAD-box
           ATP-dependent RNA helicase 35-like isoform X3 [Citrus
           sinensis]
          Length = 588

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/63 (52%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VP+ KRRAMEA K+LQRK                  +  +AE KPSLLVKASQLKR+ PE
Sbjct: 12  VPIAKRRAMEAQKILQRKGQASTLEDELE-------KSKLAEVKPSLLVKASQLKRDQPE 64

Query: 316 VSP 324
           +SP
Sbjct: 65  ISP 67


>ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citrus clementina]
           gi|557529439|gb|ESR40689.1| hypothetical protein
           CICLE_v10025231mg [Citrus clementina]
          Length = 588

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/63 (52%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VP+ KRRAMEA K+LQRK                  +  +AE KPSLLVKASQLKR+ PE
Sbjct: 12  VPIAKRRAMEAQKILQRKGQASTLEDELE-------KSKLAEVKPSLLVKASQLKRDQPE 64

Query: 316 VSP 324
           +SP
Sbjct: 65  ISP 67


>gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus persica]
          Length = 587

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/63 (53%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VPV KRRAMEA K+L RK                  +  +AEAKPSLLVKASQLKRE PE
Sbjct: 11  VPVAKRRAMEAQKILLRKGKSSGLEEDLE-------KSKLAEAKPSLLVKASQLKREAPE 63

Query: 316 VSP 324
           ++P
Sbjct: 64  ITP 66


>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/63 (53%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VPV KRRAMEA K+L RK                  +  +AEAKPSLLVKASQ+KR+ PE
Sbjct: 21  VPVAKRRAMEAQKILMRKGKASALEEELE-------KSRLAEAKPSLLVKASQMKRDQPE 73

Query: 316 VSP 324
           VSP
Sbjct: 74  VSP 76


>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/63 (53%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VPV KRRAMEA K+L RK                  +  +AEAKPSLLVKASQ+KR+ PE
Sbjct: 21  VPVAKRRAMEAQKILMRKGKASALEEELE-------KSRLAEAKPSLLVKASQMKRDQPE 73

Query: 316 VSP 324
           VSP
Sbjct: 74  VSP 76


>ref|XP_004496330.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cicer
           arietinum]
          Length = 588

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/62 (53%), Positives = 38/62 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VPV KRRA+EA K+LQRK                  + P+ E KPSLLVKASQLKRE PE
Sbjct: 11  VPVAKRRAIEAQKILQRKGKASAVTDDESE------KLPVVETKPSLLVKASQLKREQPE 64

Query: 316 VS 321
           +S
Sbjct: 65  IS 66


>ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform X1
           [Glycine max] gi|571446954|ref|XP_006577231.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
           isoform X2 [Glycine max]
          Length = 587

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/62 (53%), Positives = 38/62 (61%)
 Frame = +1

Query: 136 VPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXRPPIAEAKPSLLVKASQLKRELPE 315
           VPV KRRA+EA K+LQRK                  +  +AE KPSLLVKASQLKRE PE
Sbjct: 10  VPVAKRRALEAQKILQRKGKASAVTDDDLE------KQRVAETKPSLLVKASQLKREQPE 63

Query: 316 VS 321
           +S
Sbjct: 64  IS 65


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