BLASTX nr result

ID: Zingiber24_contig00013310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013310
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   5e-08
gb|EXB67245.1| DEAD-box ATP-dependent RNA helicase 35 [Morus not...    61   1e-07
ref|XP_006858127.1| hypothetical protein AMTR_s00062p00113470 [A...    60   3e-07
ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   7e-07
ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citr...    59   7e-07
gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus pe...    59   9e-07
ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   9e-07
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   9e-07
ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
gb|ESW19032.1| hypothetical protein PHAVU_006G090900g [Phaseolus...    56   4e-06
ref|XP_006389799.1| hypothetical protein EUTSA_v10018325mg [Eutr...    55   1e-05
ref|XP_004496330.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    55   1e-05
ref|XP_006302054.1| hypothetical protein CARUB_v10020038mg [Caps...    55   1e-05
ref|XP_004241688.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    55   1e-05
ref|XP_003553901.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    55   1e-05

>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
           vinifera] gi|147861063|emb|CAN78736.1| hypothetical
           protein VITISV_003102 [Vitis vinifera]
           gi|297743544|emb|CBI36411.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/64 (56%), Positives = 41/64 (64%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           YIPV KRRAMEA ++LQRK                     +AEAKPSLLVKASQLKR+LP
Sbjct: 10  YIPVKKRRAMEAQRILQRKGKSSALEDEAEKSK-------LAEAKPSLLVKASQLKRDLP 62

Query: 346 EVSP 357
           E+SP
Sbjct: 63  EISP 66


>gb|EXB67245.1| DEAD-box ATP-dependent RNA helicase 35 [Morus notabilis]
          Length = 587

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/64 (56%), Positives = 39/64 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRAMEA K+LQRK                      AEAKPSLLVKASQLKRE P
Sbjct: 10  YVPVAKRRAMEAQKILQRKGKSSALEEELEKSKQ-------AEAKPSLLVKASQLKREAP 62

Query: 346 EVSP 357
           E+SP
Sbjct: 63  EISP 66


>ref|XP_006858127.1| hypothetical protein AMTR_s00062p00113470 [Amborella trichopoda]
           gi|548862230|gb|ERN19594.1| hypothetical protein
           AMTR_s00062p00113470 [Amborella trichopoda]
          Length = 593

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/64 (53%), Positives = 39/64 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRR MEA K+LQRK                     + EAKPSLLVKASQLK+ELP
Sbjct: 17  YVPVKKRRMMEAQKILQRKGKSSALEDAEQAK--------LTEAKPSLLVKASQLKKELP 68

Query: 346 EVSP 357
           E+SP
Sbjct: 69  EISP 72


>ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform X1
           [Citrus sinensis] gi|568878211|ref|XP_006492097.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
           isoform X2 [Citrus sinensis]
           gi|568878213|ref|XP_006492098.1| PREDICTED: DEAD-box
           ATP-dependent RNA helicase 35-like isoform X3 [Citrus
           sinensis]
          Length = 588

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/64 (51%), Positives = 39/64 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+P+ KRRAMEA K+LQRK                     +AE KPSLLVKASQLKR+ P
Sbjct: 11  YVPIAKRRAMEAQKILQRKGQASTLEDELEKSK-------LAEVKPSLLVKASQLKRDQP 63

Query: 346 EVSP 357
           E+SP
Sbjct: 64  EISP 67


>ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citrus clementina]
           gi|557529439|gb|ESR40689.1| hypothetical protein
           CICLE_v10025231mg [Citrus clementina]
          Length = 588

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/64 (51%), Positives = 39/64 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+P+ KRRAMEA K+LQRK                     +AE KPSLLVKASQLKR+ P
Sbjct: 11  YVPIAKRRAMEAQKILQRKGQASTLEDELEKSK-------LAEVKPSLLVKASQLKRDQP 63

Query: 346 EVSP 357
           E+SP
Sbjct: 64  EISP 67


>gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus persica]
          Length = 587

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/64 (53%), Positives = 39/64 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRAMEA K+L RK                     +AEAKPSLLVKASQLKRE P
Sbjct: 10  YVPVAKRRAMEAQKILLRKGKSSGLEEDLEKSK-------LAEAKPSLLVKASQLKREAP 62

Query: 346 EVSP 357
           E++P
Sbjct: 63  EITP 66


>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/64 (53%), Positives = 39/64 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRAMEA K+L RK                     +AEAKPSLLVKASQ+KR+ P
Sbjct: 20  YVPVAKRRAMEAQKILMRKGKASALEEELEKSR-------LAEAKPSLLVKASQMKRDQP 72

Query: 346 EVSP 357
           EVSP
Sbjct: 73  EVSP 76


>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/64 (53%), Positives = 39/64 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRAMEA K+L RK                     +AEAKPSLLVKASQ+KR+ P
Sbjct: 20  YVPVAKRRAMEAQKILMRKGKASALEEELEKSR-------LAEAKPSLLVKASQMKRDQP 72

Query: 346 EVSP 357
           EVSP
Sbjct: 73  EVSP 76


>ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform X1
           [Glycine max] gi|571446954|ref|XP_006577231.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
           isoform X2 [Glycine max]
          Length = 587

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/63 (52%), Positives = 38/63 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRA+EA K+LQRK                     +AE KPSLLVKASQLKRE P
Sbjct: 9   YVPVAKRRALEAQKILQRKGKASAVTDDDLEKQR------VAETKPSLLVKASQLKREQP 62

Query: 346 EVS 354
           E+S
Sbjct: 63  EIS 65


>gb|ESW19032.1| hypothetical protein PHAVU_006G090900g [Phaseolus vulgaris]
          Length = 588

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/63 (50%), Positives = 39/63 (61%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRA+EA K+LQRK                     +AE+KPSLLVKASQ+KRE P
Sbjct: 10  YVPVAKRRAIEAQKILQRKGKALIATDDELEKMR------VAESKPSLLVKASQMKREQP 63

Query: 346 EVS 354
           E+S
Sbjct: 64  EIS 66


>ref|XP_006389799.1| hypothetical protein EUTSA_v10018325mg [Eutrema salsugineum]
           gi|557086233|gb|ESQ27085.1| hypothetical protein
           EUTSA_v10018325mg [Eutrema salsugineum]
          Length = 587

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/63 (50%), Positives = 39/63 (61%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRAME  K+LQRK                     +AEAKPSLLV+A+QLKR++P
Sbjct: 10  YVPVAKRRAMEEQKILQRKGKVPELEEEADKDK-------LAEAKPSLLVQATQLKRDVP 62

Query: 346 EVS 354
           EVS
Sbjct: 63  EVS 65


>ref|XP_004496330.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cicer
           arietinum]
          Length = 588

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/63 (50%), Positives = 37/63 (58%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRA+EA K+LQRK                     + E KPSLLVKASQLKRE P
Sbjct: 10  YVPVAKRRAIEAQKILQRKGKASAVTDDESEKLP------VVETKPSLLVKASQLKREQP 63

Query: 346 EVS 354
           E+S
Sbjct: 64  EIS 66


>ref|XP_006302054.1| hypothetical protein CARUB_v10020038mg [Capsella rubella]
           gi|482570764|gb|EOA34952.1| hypothetical protein
           CARUB_v10020038mg [Capsella rubella]
          Length = 587

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/63 (50%), Positives = 39/63 (61%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRAME  K+LQRK                     +AEAKPSLLV+A+QLKR++P
Sbjct: 10  YVPVAKRRAMEEQKILQRKGKASELEEEADKEK-------LAEAKPSLLVQATQLKRDVP 62

Query: 346 EVS 354
           EVS
Sbjct: 63  EVS 65


>ref|XP_004241688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
           lycopersicum]
          Length = 595

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/63 (50%), Positives = 38/63 (60%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRA+EA K+LQRK                     + EAKPSLLVKASQLK+E P
Sbjct: 18  YVPVAKRRAIEAQKILQRKGKSEAFEEEEEKIK-------LVEAKPSLLVKASQLKKEQP 70

Query: 346 EVS 354
           E+S
Sbjct: 71  EIS 73


>ref|XP_003553901.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoformX2
           [Glycine max] gi|571555468|ref|XP_006604118.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
           isoform X3 [Glycine max]
          Length = 588

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/63 (50%), Positives = 37/63 (58%)
 Frame = +1

Query: 166 YIPVHKRRAMEALKVLQRKXXXXXXXXXXXXXXXXXXXXXIAEAKPSLLVKASQLKRELP 345
           Y+PV KRRA+EA  +LQRK                     +AE KPSLLVKASQLKRE P
Sbjct: 10  YVPVAKRRALEAQNILQRKGKASAATDDDLEKQR------VAETKPSLLVKASQLKREQP 63

Query: 346 EVS 354
           E+S
Sbjct: 64  EIS 66


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