BLASTX nr result
ID: Zingiber24_contig00013171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00013171
(233 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003567494.1| PREDICTED: U-box domain-containing protein 4... 72 8e-11
dbj|BAJ95625.1| predicted protein [Hordeum vulgare subsp. vulgare] 71 1e-10
ref|XP_004971311.1| PREDICTED: U-box domain-containing protein 4... 69 9e-10
tpg|DAA55770.1| TPA: hypothetical protein ZEAMMB73_808749 [Zea m... 68 1e-09
gb|EAY77280.1| hypothetical protein OsI_05255 [Oryza sativa Indi... 64 2e-08
ref|NP_001172750.1| Os01g0956075 [Oryza sativa Japonica Group] g... 64 2e-08
ref|XP_003627885.1| U-box domain-containing protein [Medicago tr... 60 2e-07
ref|XP_002459121.1| hypothetical protein SORBIDRAFT_03g046280 [S... 60 2e-07
ref|XP_004308580.1| PREDICTED: U-box domain-containing protein 4... 58 2e-06
ref|XP_004511041.1| PREDICTED: U-box domain-containing protein 4... 56 6e-06
ref|XP_006347659.1| PREDICTED: U-box domain-containing protein 4... 55 1e-05
emb|CBI35119.3| unnamed protein product [Vitis vinifera] 55 1e-05
ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4... 55 1e-05
>ref|XP_003567494.1| PREDICTED: U-box domain-containing protein 4-like [Brachypodium
distachyon]
Length = 348
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/75 (57%), Positives = 50/75 (66%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ESV AF VAGV ILV+LVD A A+GRARE LVM+GG+ AV +++
Sbjct: 218 VAGCAESVAAFAAVAGVRILVDLVDGAA-ATGRARENAASALLNLVMAGGESAVEEVLAV 276
Query: 53 EGAESLVRELAEGVG 9
GAE VRELAE G
Sbjct: 277 GGAEEAVRELAEDQG 291
>dbj|BAJ95625.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 346
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES++AF V+GV IL +LV+ A+GRARE LVM+GG++AV ++++
Sbjct: 207 VAGCAESLDAFAAVSGVRILADLVEPGGAATGRARENAAAALLNLVMAGGERAVAEVLDV 266
Query: 53 EGAESLVRELAE 18
GAE VRELAE
Sbjct: 267 GGAEEAVRELAE 278
>ref|XP_004971311.1| PREDICTED: U-box domain-containing protein 4-like [Setaria italica]
Length = 381
Score = 68.6 bits (166), Expect = 9e-10
Identities = 38/72 (52%), Positives = 49/72 (68%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES+EAFR V+GV IL++LV+ A+ RARE LV++GGD AV +++
Sbjct: 253 VAGCAESLEAFRWVSGVRILLDLVEQGGAATARARENAAAALLNLVVAGGDPAVEEVVAV 312
Query: 53 EGAESLVRELAE 18
GAE VRELAE
Sbjct: 313 GGAEETVRELAE 324
>tpg|DAA55770.1| TPA: hypothetical protein ZEAMMB73_808749 [Zea mays]
Length = 331
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES+EAFR V+GV IL++LV++ A+ RARE LV++GG+ A D++
Sbjct: 205 VAGCAESLEAFRWVSGVRILLDLVESGGAATPRARENAAAALLNLVVAGGEAAAADVVAV 264
Query: 53 EGAESLVRELAE 18
GAE VRELAE
Sbjct: 265 GGAEETVRELAE 276
>gb|EAY77280.1| hypothetical protein OsI_05255 [Oryza sativa Indica Group]
Length = 329
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES++AF R++G+ ILV+LV+ ++ R RE LV++GG++AV +++
Sbjct: 203 VAGCAESLDAFTRMSGLRILVDLVEQGGASTPRTRENAAAALLNLVVAGGERAVAEVIAV 262
Query: 53 EGAESLVRELAE 18
GAE VRELAE
Sbjct: 263 GGAEDAVRELAE 274
>ref|NP_001172750.1| Os01g0956075 [Oryza sativa Japonica Group]
gi|57900187|dbj|BAD88272.1| armadillo/beta-catenin
repeat-like [Oryza sativa Japonica Group]
gi|255674086|dbj|BAH91480.1| Os01g0956075 [Oryza sativa
Japonica Group]
Length = 329
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES++AF R++G+ ILV+LV+ ++ R RE LV++GG++AV +++
Sbjct: 203 VAGCAESLDAFTRMSGLRILVDLVEQGGASTPRTRENAAAALLNLVVAGGERAVAEVIAV 262
Query: 53 EGAESLVRELAE 18
GAE VRELAE
Sbjct: 263 GGAEDAVRELAE 274
>ref|XP_003627885.1| U-box domain-containing protein [Medicago truncatula]
gi|355521907|gb|AET02361.1| U-box domain-containing
protein [Medicago truncatula]
Length = 372
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ESVEAF++V+GV +L +L+D ATG+S R RE LV GGD GD+ ++
Sbjct: 240 VAGCEESVEAFKKVSGVGVLADLLDLATGSSMRTRENAVSALLNLVRCGGDVVAGDVRDA 299
>ref|XP_002459121.1| hypothetical protein SORBIDRAFT_03g046280 [Sorghum bicolor]
gi|241931096|gb|EES04241.1| hypothetical protein
SORBIDRAFT_03g046280 [Sorghum bicolor]
Length = 335
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES+EAFR V+GV IL++ V+ A+ R RE LV++GG+ A +++
Sbjct: 207 VAGCAESLEAFRWVSGVRILLDFVEPGGAATPRQRENAAAALLNLVVAGGEAAAAEVVAV 266
Query: 53 EGAESLVRELAE 18
GAE VRE AE
Sbjct: 267 GGAEETVREFAE 278
>ref|XP_004308580.1| PREDICTED: U-box domain-containing protein 4-like [Fragaria vesca
subsp. vesca]
Length = 321
Score = 57.8 bits (138), Expect = 2e-06
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES +AFRRVAGV +L +L+D +TG+S R+RE L GG++AV ++ E
Sbjct: 206 VAGCEESADAFRRVAGVRVLADLLDFSTGSSLRSRENAVSALLNLTRCGGERAVVEVREE 265
Query: 53 E-GAESLVRELAEGVG 9
G + ++AE G
Sbjct: 266 GLGVVDGIADVAENGG 281
>ref|XP_004511041.1| PREDICTED: U-box domain-containing protein 4-like [Cicer arietinum]
Length = 325
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
VAGC ES EAFR+++G+ +L +L+D TG+S R RE LV GD GD+ ++
Sbjct: 207 VAGCEESAEAFRKISGIGVLADLLDLTTGSSMRTRENAVSALLNLVRCSGDAVTGDVRDA 266
>ref|XP_006347659.1| PREDICTED: U-box domain-containing protein 4-like isoform X1
[Solanum tuberosum] gi|565361838|ref|XP_006347660.1|
PREDICTED: U-box domain-containing protein 4-like
isoform X2 [Solanum tuberosum]
gi|565361840|ref|XP_006347661.1| PREDICTED: U-box
domain-containing protein 4-like isoform X3 [Solanum
tuberosum] gi|565361842|ref|XP_006347662.1| PREDICTED:
U-box domain-containing protein 4-like isoform X4
[Solanum tuberosum]
Length = 311
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDI 63
+AGC ES EAFR+++GV +LV+++D++TG+S R +E LV GG++ V I
Sbjct: 202 IAGCEESWEAFRKISGVGVLVDMLDSSTGSSNRTKENAISALLNLVQCGGEETVNSI 258
>emb|CBI35119.3| unnamed protein product [Vitis vinifera]
Length = 311
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
+AGC E +AFR+V+G+ ILV+L+D +TG+S R +E LV GG++ GD+ E+
Sbjct: 203 IAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENAVSALLNLVQCGGERIAGDMREA 262
>ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
Length = 309
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = -1
Query: 233 VAGCYESVEAFRRVAGVAILVELVDAATGASGRAREXXXXXXXXLVMSGGDKAVGDIMES 54
+AGC E +AFR+V+G+ ILV+L+D +TG+S R +E LV GG++ GD+ E+
Sbjct: 203 IAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENAVSALLNLVQCGGERIAGDMREA 262