BLASTX nr result
ID: Zingiber24_contig00013133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00013133
(2933 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 893 0.0
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 890 0.0
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 863 0.0
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 863 0.0
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 848 0.0
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 848 0.0
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 830 0.0
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 823 0.0
gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japo... 798 0.0
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 788 0.0
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 786 0.0
ref|XP_006645606.1| PREDICTED: probable RNA-dependent RNA polyme... 782 0.0
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 781 0.0
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 778 0.0
sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 776 0.0
sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 776 0.0
ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 776 0.0
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 776 0.0
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 773 0.0
gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indi... 769 0.0
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 893 bits (2307), Expect = 0.0
Identities = 474/867 (54%), Positives = 609/867 (70%), Gaps = 3/867 (0%)
Frame = -3
Query: 2925 QSISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRS 2746
Q+ SPQL+ALG+LEFR+AFLILSY+G + E+ +S E I +++ L M FE+ VW L
Sbjct: 96 QASSPQLVALGELEFRKAFLILSYIGDKRPEDLLSAEEILKLKNLPMGVFETEVWNNLGR 155
Query: 2745 KCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKF 2566
K I K HIYHCHV +G FKGPYL RTH+QRVLGD+N+LLVKF
Sbjct: 156 KFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKF 215
Query: 2565 AEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXSPVKCYF 2386
AE++ + + Y+K+A+EGI VGLR+Y+FFV+KDGG S VKCYF
Sbjct: 216 AEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNPTSSVKCYF 275
Query: 2385 VRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLA 2206
V MES+ LS K +HE+R +FMH H VSS++KYMARFSLILSKT+KLD+DL+
Sbjct: 276 VFMESS---------ALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLS 326
Query: 2205 SVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMSN 2026
+V+++ IDD D+DG++ YDE+ +PLI TDGTGFISED+AL+CP+++ +GK M+N
Sbjct: 327 TVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKY---MNN 383
Query: 2025 QFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPSMR 1846
D PLLIQ RLFN G A KGTLLLN+ LPPRTIQ+RPSM
Sbjct: 384 GNSD-------------------PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMI 424
Query: 1845 KVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDA 1666
KV++D S Q+ NS+EI TSN+P+R+ LS+YLIALL YGGVPNEYF+ LLK+AL+DA
Sbjct: 425 KVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDA 484
Query: 1665 QNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKL 1486
+ + +K AA+RVSL++G+MDD +V+RMIL GIP++EP++ LS ++ EERKGL+ GKL
Sbjct: 485 PSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKL 544
Query: 1485 PVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIKEL 1306
PV DC+YLMGT DPTG LK +EVC++L++GQ+ G VLVYKHPGLHFGDIHVL+A Y++ L
Sbjct: 545 PVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEAL 604
Query: 1305 ELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSSTA 1126
E FVG++KYAIFFPIKG RSLADEMANSDFDGDMYWVSRN QLL+YFR+S+PW+ ST
Sbjct: 605 EEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTR 664
Query: 1125 GVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXXX 946
V K P D + ELE +LF FL RF+ S I +AAD WL +MDRLLTL DDC+
Sbjct: 665 HVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKE 724
Query: 945 XXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGLIFN 766
L DIYYDA+DAPKSG+KV+V ELKA+K+PH+M + SY STSILG I++
Sbjct: 725 CLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMG--RESSYHSTSILGQIYD 782
Query: 765 KAGSVQTEDNQFNGISKLSCFS--RYSESGLSLWKPRYTNYLSEMAQALEHEIEEFKEEM 592
S Q E+ I +L F+ ++ L WK RY Y SEMA AL+H E K+E
Sbjct: 783 AVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHG-GETKDEY 841
Query: 591 ADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQMGG-VGRCSFAWNVAG 415
A ++I KYK +LY AAEFE+SPR +DIF+EALAIY++ Y++ G V C+F W VAG
Sbjct: 842 AAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAG 901
Query: 414 RALCMLHASKQDDKSLIPCSRSVLTEI 334
RALC L+ K +KS++ C SVL ++
Sbjct: 902 RALCKLYTVKLGEKSMV-CVPSVLRQV 927
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 890 bits (2299), Expect = 0.0
Identities = 473/875 (54%), Positives = 609/875 (69%), Gaps = 11/875 (1%)
Frame = -3
Query: 2925 QSISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRS 2746
Q+ SPQL+ALG+LEFR+AFLILSY+G + E+ +S E I +++ L M FE+ VW L
Sbjct: 96 QASSPQLVALGELEFRKAFLILSYIGELRPEDLLSAEEILKLKNLPMGVFETEVWNNLGR 155
Query: 2745 KCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHLIFK--------GPYLQLQRTHMQRVLGD 2590
K I K HIYHCHV +G FK GPYL RTH+QRVLGD
Sbjct: 156 KFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVLGD 215
Query: 2589 DNVLLVKFAEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXX 2410
+N+LLVKFAE++ + + Y+K+A+EGI VGLR+Y+FFV+KDGG
Sbjct: 216 ENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNP 275
Query: 2409 XSPVKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKT 2230
S VKCYFV MES+ LS K +HE+R +FMH H VSS++KYMARFSLILSKT
Sbjct: 276 TSSVKCYFVFMESS---------ALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKT 326
Query: 2229 MKLDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKG 2050
+KLD+DL++V+++ IDD D+DG++ YDE+ +PLI TDGTGFISED+AL+CP+++ +G
Sbjct: 327 VKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRG 386
Query: 2049 KCSTPMSNQFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRT 1870
K ++ D S PLLIQ RLFN G A KGTLLLN+ LPPRT
Sbjct: 387 KYMNNGNSDVCD----------------SRYPLLIQCRLFNNGCAVKGTLLLNRKLPPRT 430
Query: 1869 IQVRPSMRKVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLEL 1690
IQ+RPSM KV++D S Q+ NS+EI TSN+P+R+ LS+YLIALL YGGVPNEYF+ L
Sbjct: 431 IQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNL 490
Query: 1689 LKNALDDAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEER 1510
LK+AL+DA + + +K AA+RVSL++G+MDD +V+RMIL GIP++EP++ LS ++ EER
Sbjct: 491 LKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEER 550
Query: 1509 KGLKAGKLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVL 1330
KGL+ GKLPV DC+YLMGT DPTG LK +EVC++L++GQ+ G VLVYKHPGLHFGDIHVL
Sbjct: 551 KGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVL 610
Query: 1329 SARYIKELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKP 1150
+A Y++ LE FVG++KYAIFFPIKG RSLADEMANSDFDGDMYWVSRN QLL+YFR+S+P
Sbjct: 611 NATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEP 670
Query: 1149 WVPMSSTAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLS 970
W+ ST V K P D + ELE +LF FL RF+ S I +AAD WL +MDRLLTL
Sbjct: 671 WMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLR 730
Query: 969 DDCAXXXXXXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTST 790
DDC+ L DIYYDA+DAPKSG+KV+V ELKA+K+PH+M + SY ST
Sbjct: 731 DDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMG--RESSYHST 788
Query: 789 SILGLIFNKAGSVQTEDNQFNGISKLSCFS--RYSESGLSLWKPRYTNYLSEMAQALEHE 616
SILG I++ S Q E+ I +L F+ ++ L WK RY Y SEMA AL+H
Sbjct: 789 SILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHG 848
Query: 615 IEEFKEEMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQMGG-VGRC 439
E K+E A ++I KYK +LY AAEFE+SPR +DIF+EALAIY++ Y++ G V C
Sbjct: 849 -GETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYC 907
Query: 438 SFAWNVAGRALCMLHASKQDDKSLIPCSRSVLTEI 334
+F W VAGRALC L+ K +KS++ C SVL ++
Sbjct: 908 NFPWRVAGRALCKLYTVKLGEKSMV-CVPSVLRQV 941
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 863 bits (2229), Expect = 0.0
Identities = 469/871 (53%), Positives = 605/871 (69%), Gaps = 9/871 (1%)
Frame = -3
Query: 2913 PQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSKCIP 2734
PQ +ALG+LEFR+AFLILSY+G LEE I+ + I+ ++ L M +FES VWE+L K I
Sbjct: 147 PQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFESEVWEKLGRKNIS 206
Query: 2733 LLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFAEEM 2554
K H+YHCH+ +G+ FKGPYL RTH+QR LGDDN+LLVKF EE+
Sbjct: 207 QEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEEL 266
Query: 2553 NIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS-PVKCYFVRM 2377
+ S+ + S Y+++A+EGILVGLR Y FFV+KDGG + PVKCYFVRM
Sbjct: 267 GGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPSTSPVKCYFVRM 326
Query: 2376 ESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLASVH 2197
ES+ D YILS K +HE+R +FMHV TVSS++ YM+R SLILSKTMKL++D + ++
Sbjct: 327 ESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRIN 386
Query: 2196 VEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMSNQ-F 2020
+E I+D C D DGN+ Y ++GE LIHTDGTGFISED+ALKCP +++K KC+ S +
Sbjct: 387 IERIEDEPCRDKDGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERS 445
Query: 2019 LDGSEIAEEPLNI--TKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPSMR 1846
+D E+ ++ T+S E PLL+Q RLF G A KGTLLLNK LPP+TIQ+RPSM
Sbjct: 446 IDRKELEANFSDVARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMI 505
Query: 1845 KVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDA 1666
KVK+D S Q+ NSLE+V TSN+P++T LSR LIALL YGGVP +FL++L+NALDDA
Sbjct: 506 KVKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDA 565
Query: 1665 QNARYTKLAAIRVSLKYGDMD-DFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGK 1489
+ K A++VS YG MD DF +RMIL GI L+EPY+Q RLS+LMKEE+K L+AGK
Sbjct: 566 RGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGK 625
Query: 1488 LPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGD-VLVYKHPGLHFGDIHVLSARYIK 1312
LPVT+ YYLMGTVDPTG+LK NEVC++L++GQ+S + VLVY++PGLHFGDIHVL A Y+K
Sbjct: 626 LPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVK 685
Query: 1311 ELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSS 1132
ELE FVG SKYAIFFP G RSLADE+A DFDGDMY+VSRN +LL++F+ S+ W+ S
Sbjct: 686 ELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELLKHFKESERWMSTSK 745
Query: 1131 TAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXX 952
K P+D + ELE +LF FL RF PS S+AADCW + MDR LTL D+ A
Sbjct: 746 NLSA-NKRPIDFSLEELESELFKLFLNTRFCPSNAKSLAADCWQAVMDRFLTLGDESAEE 804
Query: 951 XXXXXXXXXXLVDIYYDAVDAP-KSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGL 775
L++IYYDA+DAP KSG+KV+VP +LK +K+P YM + +S S+ STS+LG
Sbjct: 805 KAAMKENMLRLINIYYDALDAPKKSGIKVEVPEDLKVEKFPCYMRRDESVSFESTSVLGT 864
Query: 774 IFNKAGSVQTEDNQFNGISKLSCF-SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEFKE 598
I+N S + D I KL CF E+ ++ WK Y Y EM +A++ E +E
Sbjct: 865 IYNTVKSYEAVDRSVTEIWKLPCFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVE-RE 923
Query: 597 EMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDY-AQMGGVGRCSFAWNV 421
E A+ +I+KYK +LY AAEFE S R ++I+ EALAIYN+ YD A V CSFAW V
Sbjct: 924 EAAELVIEKYKQILYGAAEFEQSTRTLEEIYNEALAIYNITYDLAASRRQVSYCSFAWRV 983
Query: 420 AGRALCMLHASKQDDKSLIPCSRSVLTEILG 328
AG AL +A +Q D+S++ CS SVL EI G
Sbjct: 984 AGSALRKFYARRQGDRSML-CSASVLREICG 1013
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 863 bits (2229), Expect = 0.0
Identities = 469/871 (53%), Positives = 605/871 (69%), Gaps = 9/871 (1%)
Frame = -3
Query: 2913 PQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSKCIP 2734
PQ +ALG+LEFR+AFLILSY+G LEE I+ + I+ ++ L M +FES VWE+L K I
Sbjct: 149 PQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFESEVWEKLGRKNIS 208
Query: 2733 LLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFAEEM 2554
K H+YHCH+ +G+ FKGPYL RTH+QR LGDDN+LLVKF EE+
Sbjct: 209 QEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEEL 268
Query: 2553 NIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS-PVKCYFVRM 2377
+ S+ + S Y+++A+EGILVGLR Y FFV+KDGG + PVKCYFVRM
Sbjct: 269 GGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPSTSPVKCYFVRM 328
Query: 2376 ESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLASVH 2197
ES+ D YILS K +HE+R +FMHV TVSS++ YM+R SLILSKTMKL++D + ++
Sbjct: 329 ESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRIN 388
Query: 2196 VEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMSNQ-F 2020
+E I+D C D DGN+ Y ++GE LIHTDGTGFISED+ALKCP +++K KC+ S +
Sbjct: 389 IERIEDEPCRDKDGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERS 447
Query: 2019 LDGSEIAEEPLNI--TKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPSMR 1846
+D E+ ++ T+S E PLL+Q RLF G A KGTLLLNK LPP+TIQ+RPSM
Sbjct: 448 IDRKELEANFSDVARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMI 507
Query: 1845 KVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDA 1666
KVK+D S Q+ NSLE+V TSN+P++T LSR LIALL YGGVP +FL++L+NALDDA
Sbjct: 508 KVKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDA 567
Query: 1665 QNARYTKLAAIRVSLKYGDMD-DFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGK 1489
+ K A++VS YG MD DF +RMIL GI L+EPY+Q RLS+LMKEE+K L+AGK
Sbjct: 568 RGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGK 627
Query: 1488 LPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGD-VLVYKHPGLHFGDIHVLSARYIK 1312
LPVT+ YYLMGTVDPTG+LK NEVC++L++GQ+S + VLVY++PGLHFGDIHVL A Y+K
Sbjct: 628 LPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVK 687
Query: 1311 ELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSS 1132
ELE FVG SKYAIFFP G RSLADE+A DFDGDMY+VSRN +LL++F+ S+ W+ S
Sbjct: 688 ELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELLKHFKESERWMSTSK 747
Query: 1131 TAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXX 952
K P+D + ELE +LF FL RF PS S+AADCW + MDR LTL D+ A
Sbjct: 748 NLSA-NKRPIDFSLEELESELFKLFLNTRFCPSNAKSLAADCWQAVMDRFLTLGDESAEE 806
Query: 951 XXXXXXXXXXLVDIYYDAVDAP-KSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGL 775
L++IYYDA+DAP KSG+KV+VP +LK +K+P YM + +S S+ STS+LG
Sbjct: 807 KAAMKENMLRLINIYYDALDAPKKSGIKVEVPEDLKVEKFPCYMRRDESVSFESTSVLGT 866
Query: 774 IFNKAGSVQTEDNQFNGISKLSCF-SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEFKE 598
I+N S + D I KL CF E+ ++ WK Y Y EM +A++ E +E
Sbjct: 867 IYNTVKSYEAVDRSVTEIWKLPCFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVE-RE 925
Query: 597 EMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDY-AQMGGVGRCSFAWNV 421
E A+ +I+KYK +LY AAEFE S R ++I+ EALAIYN+ YD A V CSFAW V
Sbjct: 926 EAAELVIEKYKQILYGAAEFEQSTRTLEEIYNEALAIYNITYDLAASRRQVSYCSFAWRV 985
Query: 420 AGRALCMLHASKQDDKSLIPCSRSVLTEILG 328
AG AL +A +Q D+S++ CS SVL EI G
Sbjct: 986 AGSALRKFYARRQGDRSML-CSASVLREICG 1015
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 848 bits (2191), Expect = 0.0
Identities = 462/870 (53%), Positives = 591/870 (67%), Gaps = 8/870 (0%)
Frame = -3
Query: 2916 SPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEEL--RSK 2743
S L+ALG+LEFR+AFLILSYLG LEE +SV+ I+ + L M FES +WE R
Sbjct: 14 SQHLVALGELEFRKAFLILSYLGGKNLEEVVSVDQIRGYKDLPMRTFESKIWEAFGCRRD 73
Query: 2742 CIPLLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFA 2563
I K HIYHCHVD +G FKGPYL R +QR LGDDN+L+VKF
Sbjct: 74 YIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKFG 133
Query: 2562 E-EMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS-PVKCY 2389
E + + GS + Y S Y+KV EGI VGLR Y+FFV+KDGG + PVKC+
Sbjct: 134 EVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCF 193
Query: 2388 FVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDL 2209
FVRMES D + ILS K I ++R+VFMHV +SSLS YMARFSLILSKTM L++DL
Sbjct: 194 FVRMESVASIDNQDN-ILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDL 252
Query: 2208 ASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMS 2029
+ V ++ I D C D DGN+ Y +G+PLIHTDGTGFIS D+ALKCP + FKG C +
Sbjct: 253 SCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFKGTCLRASN 312
Query: 2028 NQFLD-GSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPS 1852
+ L+ +E+ E+ + + PLLIQFRLFN G A KGT L+NK L +T+ +RPS
Sbjct: 313 IERLNVHNEVMEQ---YPECRNGDPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPS 369
Query: 1851 MRKVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALD 1672
M KV++D S S NSLEIV TS+RPK+T LS+ LIALL YGGVP E+F+ ++ NAL+
Sbjct: 370 MIKVETDPKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALE 429
Query: 1671 DAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAG 1492
DA K AA+RV+L YGDMDD +V+ MI CGIPLEEPY+Q RLS+LMKEE+K LK G
Sbjct: 430 DAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGG 489
Query: 1491 KLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIK 1312
K+PV + YYLMGT DPTGLL+ +EVC++L+ GQISG+VL+Y++PGLHFGDIH+L A Y++
Sbjct: 490 KIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVR 549
Query: 1311 ELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSS 1132
ELE FVG++KYAIFFP KG RSLADEM+ DFDGDM++VSRN QLL F+ ++PW P +S
Sbjct: 550 ELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTS 609
Query: 1131 TAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXX 952
T V + P + +D ELE +LF FL NRF+PS T+ VAAD WL+ MDRLLTL +DCA
Sbjct: 610 TPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDCAEE 669
Query: 951 XXXXXXXXXXLVDIYYDAVDAP-KSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGL 775
L+DIYYDA+DAP K G +++VP LKA+ +PH+M K + +Y STSILG
Sbjct: 670 IVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSILGK 729
Query: 774 IFNKAGSVQTEDNQFNGISKLSCF-SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEFKE 598
I++K + + D N + KL CF E L WK Y Y EM AL + E
Sbjct: 730 IYDKVKAYEDMDLSSNDVWKLPCFDDEVHELYLVKWKELYGQYRKEMRNAL--KAGEESN 787
Query: 597 EMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQ-MGGVGRCSFAWNV 421
+ A+++I+KYK LYEAAEF S R+ ++IFEEA+A+Y ++Y++A+ G VG CSFAW V
Sbjct: 788 DKANEVIRKYKEFLYEAAEFNLSKRRDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRV 847
Query: 420 AGRALCMLHASKQDDKSLIPCSRSVLTEIL 331
AG ALC L+ K + + CS S L IL
Sbjct: 848 AGLALCTLYVLKNQGERPMICSPSALKGIL 877
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 848 bits (2191), Expect = 0.0
Identities = 462/870 (53%), Positives = 591/870 (67%), Gaps = 8/870 (0%)
Frame = -3
Query: 2916 SPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEEL--RSK 2743
S L+ALG+LEFR+AFLILSYLG LEE +SV+ I+ + L M FES +WE R
Sbjct: 36 SQHLVALGELEFRKAFLILSYLGGKNLEEVVSVDQIRGYKDLPMRTFESKIWEAFGCRRD 95
Query: 2742 CIPLLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFA 2563
I K HIYHCHVD +G FKGPYL R +QR LGDDN+L+VKF
Sbjct: 96 YIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKFG 155
Query: 2562 E-EMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS-PVKCY 2389
E + + GS + Y S Y+KV EGI VGLR Y+FFV+KDGG + PVKC+
Sbjct: 156 EVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCF 215
Query: 2388 FVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDL 2209
FVRMES D + ILS K I ++R+VFMHV +SSLS YMARFSLILSKTM L++DL
Sbjct: 216 FVRMESVASIDNQDN-ILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDL 274
Query: 2208 ASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMS 2029
+ V ++ I D C D DGN+ Y +G+PLIHTDGTGFIS D+ALKCP + FKG C +
Sbjct: 275 SCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFKGTCLRASN 334
Query: 2028 NQFLD-GSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPS 1852
+ L+ +E+ E+ + + PLLIQFRLFN G A KGT L+NK L +T+ +RPS
Sbjct: 335 IERLNVHNEVMEQ---YPECRNGDPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPS 391
Query: 1851 MRKVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALD 1672
M KV++D S S NSLEIV TS+RPK+T LS+ LIALL YGGVP E+F+ ++ NAL+
Sbjct: 392 MIKVETDPKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALE 451
Query: 1671 DAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAG 1492
DA K AA+RV+L YGDMDD +V+ MI CGIPLEEPY+Q RLS+LMKEE+K LK G
Sbjct: 452 DAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGG 511
Query: 1491 KLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIK 1312
K+PV + YYLMGT DPTGLL+ +EVC++L+ GQISG+VL+Y++PGLHFGDIH+L A Y++
Sbjct: 512 KIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVR 571
Query: 1311 ELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSS 1132
ELE FVG++KYAIFFP KG RSLADEM+ DFDGDM++VSRN QLL F+ ++PW P +S
Sbjct: 572 ELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTS 631
Query: 1131 TAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXX 952
T V + P + +D ELE +LF FL NRF+PS T+ VAAD WL+ MDRLLTL +DCA
Sbjct: 632 TPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDCAEE 691
Query: 951 XXXXXXXXXXLVDIYYDAVDAP-KSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGL 775
L+DIYYDA+DAP K G +++VP LKA+ +PH+M K + +Y STSILG
Sbjct: 692 IVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSILGK 751
Query: 774 IFNKAGSVQTEDNQFNGISKLSCF-SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEFKE 598
I++K + + D N + KL CF E L WK Y Y EM AL + E
Sbjct: 752 IYDKVKAYEDMDLSSNDVWKLPCFDDEVHELYLVKWKELYGQYRKEMRNAL--KAGEESN 809
Query: 597 EMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQ-MGGVGRCSFAWNV 421
+ A+++I+KYK LYEAAEF S R+ ++IFEEA+A+Y ++Y++A+ G VG CSFAW V
Sbjct: 810 DKANEVIRKYKEFLYEAAEFNLSKRRDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRV 869
Query: 420 AGRALCMLHASKQDDKSLIPCSRSVLTEIL 331
AG ALC L+ K + + CS S L IL
Sbjct: 870 AGLALCTLYVLKNQGERPMICSPSALKGIL 899
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 830 bits (2144), Expect = 0.0
Identities = 457/874 (52%), Positives = 585/874 (66%), Gaps = 7/874 (0%)
Frame = -3
Query: 2931 SGQSISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEEL 2752
S + S L+ALG+LEFR+AFLIL+YLG LEE +S + I+ + L M+ FES +W+
Sbjct: 9 SESTTSQHLVALGELEFRKAFLILNYLGGKNLEEVVSADQIRGYKDLPMETFESKIWDAF 68
Query: 2751 --RSKCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVL 2578
R I KAHIYHCHVD +G FKGPYL QR +QR LGDDN+L
Sbjct: 69 GCRRDYIKEEDRVKYLDWDSGKAHIYHCHVDPDGSYRFKGPYLSKQRNVLQRTLGDDNIL 128
Query: 2577 LVKFAEEMNIGKG-SHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS- 2404
+VKF E + S + Y + Y+KV +EGI VGLR Y+FFV+KDGG +
Sbjct: 129 MVKFEEVKDERYSVSSSLDNYFAKYNKVLREGIHVGLRCYRFFVFKDGGKEEKKKDPTTS 188
Query: 2403 PVKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMK 2224
PVKC+FV MES D + IL K I ++R+VFMHV +SSLS YMARFSLILSKTM
Sbjct: 189 PVKCFFVCMESVASVDNQDN-ILCGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMN 247
Query: 2223 LDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKC 2044
L++DL+ V ++ I D C D DGN Y +G+PLIHTDGTGFIS D+ALKCP + KG C
Sbjct: 248 LEVDLSFVDIKPIADEPCRDKDGNAVYGTDGKPLIHTDGTGFISHDLALKCPKNQVKGTC 307
Query: 2043 STPMSNQFLD-GSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTI 1867
+ + L +E+ E+ + L + PLLIQFRLFN G A KGT L+NK L RT+
Sbjct: 308 LQASNIERLRVHNEVMEQN---PECLHGDPPLLIQFRLFNNGRAVKGTFLVNKKLNHRTL 364
Query: 1866 QVRPSMRKVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELL 1687
VRPSM KV++D S S NSLEIV TS RPK+T LS+ LIALL YGGVP E+F+ +L
Sbjct: 365 HVRPSMIKVETDPKLSNTFSKNSLEIVGTSCRPKKTFLSKNLIALLSYGGVPEEFFMGIL 424
Query: 1686 KNALDDAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERK 1507
NAL+DA K AA+RV+L YGDMDD +V+ MI CGIPLEEPY+Q LS+L KEE+K
Sbjct: 425 NNALEDAHGILSNKKAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQHHLSILKKEEKK 484
Query: 1506 GLKAGKLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLS 1327
LK GK+PV + YYLMGT DPTGLL+ +EVC++L+ GQ+SG+VLVY++PGLHFGDIH+L
Sbjct: 485 SLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVLVYRNPGLHFGDIHILK 544
Query: 1326 ARYIKELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPW 1147
A Y++ELE FVG++KYAIFFP KG RSLADEM+ DFDGDM++VSRN +LL F+ ++PW
Sbjct: 545 ATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPRLLENFKQTEPW 604
Query: 1146 VPMSSTAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSD 967
P +ST V + P + +D ELE +LF FL NRF+PS+T+ VAAD WL+ MDRLLTL +
Sbjct: 605 TPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSFTVGVAADSWLAMMDRLLTLGN 664
Query: 966 DCAXXXXXXXXXXXXLVDIYYDAVDAP-KSGLKVDVPPELKADKYPHYMEKLKSDSYTST 790
DC L+DIYYDA+DAP K G K++VP LKA+ +PH+MEK + +Y ST
Sbjct: 665 DCTEEIACVKKNINLLIDIYYDALDAPKKGGRKIEVPEALKAELFPHFMEKHEKKTYRST 724
Query: 789 SILGLIFNKAGSVQTEDNQFNGISKLSCFSRYSESGLSLWKPRYTNYLSEMAQALEHEIE 610
SILG I++K + + D S ES L WK Y Y +EM AL+ E
Sbjct: 725 SILGKIYDKVKAYEDMD----------LSSNVHESCLVKWKGLYGQYRTEMRNALQAGKE 774
Query: 609 EFKEEMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYA-QMGGVGRCSF 433
K A+++IKKYK +LYEAAEF S R+ ++IFEEA A+Y + Y++A + G VG+C F
Sbjct: 775 --KNNEANEVIKKYKEILYEAAEFNLSRRRDEEIFEEARALYQVTYNHAKRQGAVGKCGF 832
Query: 432 AWNVAGRALCMLHASKQDDKSLIPCSRSVLTEIL 331
AW VAG ALC L+ K ++ + CS S L IL
Sbjct: 833 AWRVAGLALCTLYVLKNQEERPLICSPSALKGIL 866
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 823 bits (2125), Expect = 0.0
Identities = 445/868 (51%), Positives = 586/868 (67%), Gaps = 11/868 (1%)
Frame = -3
Query: 2901 ALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSKCIPLLXX 2722
ALG+LEFR+AFLIL+Y+G+ ++++ +S+E I+ + L+M FE VW + +
Sbjct: 130 ALGELEFRKAFLILNYIGKQRIDDVLSIEKIRTWKDLSMQCFEYEVWRTVGERYASQTDR 189
Query: 2721 XXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFAEEM-NIG 2545
A Y CHVD G+ FKGP+L+ +TH++RVLGDD VL VKFAEEM +
Sbjct: 190 RNLDWDSGK-AENYQCHVDPVGNFSFKGPFLESTQTHLRRVLGDDKVLTVKFAEEMVDER 248
Query: 2544 KGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXSP-VKCYFVRMESN 2368
+G ++I+ ++A++GILVGLRRY FFV+KDGG + VKCYFV M+S+
Sbjct: 249 RGEFNLSRSKNIFRRIAKDGILVGLRRYHFFVFKDGGKEEKRKNANTTGVKCYFVCMKSD 308
Query: 2367 WIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLASVHVEM 2188
+D PYILS+K I E+R++FM VHTV +L+KYMARFSLILSKT+KL++DL SV++E
Sbjct: 309 AESDMHTPYILSNKTIQEARSMFMDVHTVPNLAKYMARFSLILSKTIKLEVDLGSVNIER 368
Query: 2187 IDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKG------KCSTPMSN 2026
I+D C+D+ I YD+NG+ LIHTDGTGFISED+ K +IFK K T ++
Sbjct: 369 INDKPCLDNHNEIVYDQNGQCLIHTDGTGFISEDLMSKFSKNIFKERYLKQKKVETCLNG 428
Query: 2025 QFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPSMR 1846
L+ + +E + K ++ + LLIQFRLF G A KGT+L+NKLLPP TIQVRPSM
Sbjct: 429 MELNAKSVLDEEI---KYVSGDLHLLIQFRLFYDGCAVKGTVLVNKLLPPNTIQVRPSMV 485
Query: 1845 KVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDA 1666
KV+ D FS + S NS E+V TSNRP+ LSRYLI LL +GGVP F+ L++ ALDD
Sbjct: 486 KVERDTDFSRLPSFNSFEMVGTSNRPRGAALSRYLITLLSHGGVPKSCFMFLIQAALDDV 545
Query: 1665 QNARYTKLAAIRVSLKYGDM-DDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGK 1489
QN RY+K A+ ++KY ++ D+ LV+RMI CG+PLEEPY+Q RLS+LMKEERKGLK GK
Sbjct: 546 QNVRYSKKLALTAAVKYQEISDNLLVARMIFCGLPLEEPYLQHRLSILMKEERKGLKEGK 605
Query: 1488 LPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIKE 1309
+ + + YYLMGT DPTG LK NEVC++L++GQISG VLVY+HPGLHFGDIHV +A YI++
Sbjct: 606 VLLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGKVLVYRHPGLHFGDIHVFTATYIED 665
Query: 1308 LELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSST 1129
L VG++K+AIFF +G RS ADE+AN DFDGDMYW+S N +LL YF++ PW SS
Sbjct: 666 LVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMYWISTNPELLHYFKAGPPWERSSSE 725
Query: 1128 AGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXX 949
Q+ P++ + ELE +LFD FL +RF PS AAD WL YMDRLLTL D+CA
Sbjct: 726 KPPPQRKPIEYSPDELETELFDLFLESRFHPSIAKCAAADSWLVYMDRLLTLGDECAEEK 785
Query: 948 XXXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGLIF 769
L D+YY+AVDAPKSG KV+VP +LK ++YPH+ME ++ YTSTSILG I+
Sbjct: 786 GCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLKPERYPHFME--RTYQYTSTSILGQIY 843
Query: 768 NKAGSVQTEDNQFNGISKLSCFSRYSE-SGLSLWKPRYTNYLSEMAQALEHEIEEFKEEM 592
+ S Q D I L CF E SG+ WK Y Y EM +AL + K+
Sbjct: 844 DLVASAQM-DVPCEDIELLPCFLEEVEPSGMEKWKGLYAQYRDEMNKALSS--TDQKKSN 900
Query: 591 ADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYA-QMGGVGRCSFAWNVAG 415
AD++I+ YK +LY A E+E+ R R++IF EA IY ++Y YA + + +C FAW VAG
Sbjct: 901 ADEVIQNYKKILYGAQEYEERTRPREEIFREACEIYAISYFYAKEKSDIAKCGFAWKVAG 960
Query: 414 RALCMLHASKQDDKSLIPCSRSVLTEIL 331
ALC LHA KQ K+ I C SVL E+L
Sbjct: 961 CALCELHALKQ-KKNSITCLSSVLQELL 987
>gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japonica Group]
Length = 1243
Score = 798 bits (2062), Expect = 0.0
Identities = 432/907 (47%), Positives = 587/907 (64%), Gaps = 42/907 (4%)
Frame = -3
Query: 2925 QSISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRS 2746
++ SPQ++AL +L FR+ F++ +YL K+E +SV++I+ +++L+M QFES +W
Sbjct: 340 EAASPQMLALEELGFRKIFMVFAYLASEKIENVLSVDYIRSLKFLSMAQFESQIWRTFGH 399
Query: 2745 KCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHL---IFKGPYLQLQRTHMQRVLGDDNVLL 2575
K I +YHC+V + G IFKGPY++ RTH+Q+V+GDDNVL+
Sbjct: 400 KYIAASDRAKNLDSDPGMTKVYHCNVAIRGDTVVKIFKGPYIENTRTHLQKVVGDDNVLV 459
Query: 2574 VKFAEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS--- 2404
VKF +++ K F Y YHKVA++GI++GLRRY+FFVYKDGG
Sbjct: 460 VKFMGKLSDTKTD--FSTYCEHYHKVAEDGIVLGLRRYRFFVYKDGGKEEKLKQEKIEDK 517
Query: 2403 -----PVKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLIL 2239
PV CYFVR ES W D+ PYILS + + ++R +FMH+ + +L+KYMARF+LIL
Sbjct: 518 NKCTSPVMCYFVRTESGWNMDE--PYILSGRTVGQARELFMHISSAPTLAKYMARFALIL 575
Query: 2238 SKTMKLDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHI 2059
SKT+ D DL++V+V I D C+D GN+ + + EPLIHTDGTG +S D+AL CP I
Sbjct: 576 SKTITWDADLSAVYVRRIKDEPCMDRHGNVVHKDQ-EPLIHTDGTGLVSVDLALNCPTSI 634
Query: 2058 FKGKCSTPMSNQFLDGSEIAEEPLNITK--SLTSEAPLLIQFRLFNKGAAFKGTLLLNKL 1885
FKGK P D SE P ++ + SLT+E PLL+QFRLF G+A KGT+L+++
Sbjct: 635 FKGKFLKPQGIATCDESETVMRPNSLKRHRSLTAEHPLLMQFRLFYNGSAVKGTVLVDRR 694
Query: 1884 LPPRTIQVRPSMRKVKSDA---------------------SFSYIQSCNSLEIVATSNRP 1768
LPP TI +RPSM K+++ S S +QS NS EIV+TSNRP
Sbjct: 695 LPPATILIRPSMVKIETHPELSGVRSVNSSEIVSARNAKKSLSGVQSVNSFEIVSTSNRP 754
Query: 1767 KRTCLSRYLIALLHYGGVPNEYFLELLKNALDDAQNARYTKLAAIRVSLKYGDMDDFLVS 1588
+RT SR+LI LL YGGVP EYFLELL++A++ A+NA Y A+R++ Y DM+D + +
Sbjct: 755 RRTLTSRFLITLLCYGGVPEEYFLELLQSAIEGAENACYDYEDALRIAFSYADMEDSMSA 814
Query: 1587 RMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKLPVTDCYYLMGTVDPTGLLKPNEVCVV 1408
RMIL GIPLEE Y+Q RL + ++ERKG+K GK+P+ +CYYLM T DPTG L+PNEVCV+
Sbjct: 815 RMILSGIPLEESYLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVI 874
Query: 1407 LENGQISGDVLVYKHPGLHFGDIHVLSARYIKELEL-FVGDSKYAIFFPIKGSRSLADEM 1231
LENGQ SGDVLVYKHPGLHFGDIHVL A YI++LE +VG +KYAI FPI G RSLADEM
Sbjct: 875 LENGQFSGDVLVYKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEM 934
Query: 1230 ANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSSTAGVQQKGPLDLTDRELEKKLFDQFLA 1051
ANSDFDGD+YWVS+N +LL +F+ S+PWV +QK P D + +LE+ LF +FL
Sbjct: 935 ANSDFDGDIYWVSKNPKLLEHFKPSEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEFLK 994
Query: 1050 NRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXXXXXXXXXXXLVDIYYDAVDAPKSGLK 871
RF PS+ + AAD WL+YMDRLLT S D LVD+YY A+DAPK+G K
Sbjct: 995 TRFTPSFALGTAADSWLAYMDRLLTDSLD-EIEKKLIEEKMLKLVDLYYLALDAPKTGNK 1053
Query: 870 VDVPPELKADKYPHYMEKLKSDSYTSTSILGLIFNKAGSVQTEDN---QFNGISKLSCFS 700
V++P +L +YPH+M +S SY S+SILG I++KA V++ + Q G+S L CF
Sbjct: 1054 VNIPSDLMVKQYPHFMG--RSFSYHSSSILGQIYDKAEDVESLRSCNVQPIGVSLLPCFM 1111
Query: 699 RYS--ESGLSLWKPRYTNYLSEMAQALEHEIEEFKEEMA-DDIIKKYKWMLYEAAEFEDS 529
+ LW+ RY YL++ +++ + M ++ +KYK MLY+A+EFE +
Sbjct: 1112 EREAPPAARHLWQHRYEEYLTDSTMLYRAMVDKEERNMKFQELYEKYKHMLYDASEFEQT 1171
Query: 528 PRKRDDIFEEALAIYNLAYDYAQMGG-VGRCSFAWNVAGRALCMLHASKQDDKSLIPCSR 352
R DD+F EA IY + Y+ A+ RC FAW VAGRALC +A K + + + CS
Sbjct: 1172 QRDPDDVFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTAL-CSL 1230
Query: 351 SVLTEIL 331
+L +I+
Sbjct: 1231 PLLRKII 1237
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 788 bits (2036), Expect = 0.0
Identities = 430/871 (49%), Positives = 569/871 (65%), Gaps = 7/871 (0%)
Frame = -3
Query: 2919 ISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSKC 2740
I PQ++AL +LEF++AFL+LSY L E +S + I+Q + L M +E+ VW+ L
Sbjct: 144 IPPQILALSELEFKKAFLLLSYFPGQSLAEVLSADEIRQWKDLPMVAYEAAVWDRLSRLE 203
Query: 2739 IPLLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFAE 2560
+ K H Y CHV +G FKGP L+ TH+ +VLGD+NVL VKFA+
Sbjct: 204 LSQTVERVSLEWDSEKTHYYQCHVASDGSYTFKGPLLEPTGTHLHKVLGDENVLTVKFAD 263
Query: 2559 EMNIGKGSHAFQGYE-SIYHKVAQEGILVGLRRYQFFVYKD-GGXXXXXXXXXSPVKCYF 2386
+ K S + S Y ++A+ GI+VGLRRYQFFV+KD G + VKCYF
Sbjct: 264 ---VQKNSSTYSNDRYSAYKRIAKNGIMVGLRRYQFFVFKDVGKAEKKKDFSTNGVKCYF 320
Query: 2385 VRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLA 2206
+R +S D K YI S K I+E+R FMHVHT+ SL+KYMARFSLILSKT KL++D+
Sbjct: 321 IRTDSTAANDMGKAYIFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMT 380
Query: 2205 SVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMSN 2026
+ + I +I C D + N+ D+N EP +H+DGTG+ISED+A CP +IFKGKC +
Sbjct: 381 GITYQEIKEIHCHDQNNNVVLDKNKEPRMHSDGTGYISEDLARMCPVNIFKGKCLSKK-- 438
Query: 2025 QFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPSMR 1846
NI +S + PLLIQFR+F G A KGT LLNK LP RT+QVRPSM
Sbjct: 439 -------------NIQESCGQDPPLLIQFRMFYDGNAVKGTFLLNKKLPDRTVQVRPSMI 485
Query: 1845 KVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDA 1666
KV D + S + NSLE+V TSN PKRT LSR L+ALL YGGVPNE+FL+LL N +++
Sbjct: 486 KVSKDRALSNFSTFNSLEVVTTSNPPKRTKLSRNLVALLSYGGVPNEFFLDLLLNTMEET 545
Query: 1665 QNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKL 1486
+ K AA++ +L +GDMDD ++MIL GIPL+EP+++ RLS+L E+ LKAG+L
Sbjct: 546 KTIFNNKRAALKAALNHGDMDDQNAAQMILVGIPLDEPHLKDRLSILSNIEKNDLKAGRL 605
Query: 1485 PVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIKEL 1306
PVT+ YYLMGTVDPTG LK +EVCV+LE+GQISGDVLVY++PG+HFGDIHVL A Y+K L
Sbjct: 606 PVTESYYLMGTVDPTGELKEDEVCVILESGQISGDVLVYRNPGVHFGDIHVLKATYVKAL 665
Query: 1305 ELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMS-ST 1129
E +VG+SKYA+FFP KG RSL DE+A DFDGDMY++SRN +LL F+ S+PWV +S +
Sbjct: 666 EEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEQFKPSEPWVSLSPPS 725
Query: 1128 AGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXX 949
+ P+D + ELE++LFD FL RF S I +AAD WL+ MDR LTL D+ A
Sbjct: 726 KSNSTRKPIDFSPEELEEELFDMFLKARFHSSNVIGMAADSWLTIMDRFLTLGDERAEEK 785
Query: 948 XXXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGLIF 769
L+DIYYDA+DA K G+KV +P LK D +PHYME+ K + STSILG+I+
Sbjct: 786 AEMKRKMLSLIDIYYDALDAAKKGVKVSLPDALKPDIFPHYMERDK--KFKSTSILGIIY 843
Query: 768 NKAGSVQTEDN-QFNGISKLSCF--SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEFKE 598
+ S E++ + ISKL CF SE +P Y NY +EM QAL + K+
Sbjct: 844 DFVQSQTAEEHTPSSEISKLQCFEDEPVSEFHKEKCRPWYDNYRAEMIQALSN-----KD 898
Query: 597 EMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYA-QMGGVGRCSFAWNV 421
+ A ++I+KYK Y AA FEDS + ++++ +ALA+YN+ YDYA +M V +C FAW V
Sbjct: 899 DTASEVIEKYKQEFYGAAGFEDSKKSLEELYPQALALYNIVYDYAIEMKSVRKCGFAWKV 958
Query: 420 AGRALCMLHASKQDDKSLIPCSRSVLTEILG 328
AG LC + K K+L+ CS S+L E+ G
Sbjct: 959 AGPVLCRFYLKKTGGKALL-CSLSMLKELWG 988
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 786 bits (2029), Expect = 0.0
Identities = 424/871 (48%), Positives = 569/871 (65%), Gaps = 9/871 (1%)
Frame = -3
Query: 2913 PQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSKCIP 2734
PQL+ALG+LEF++AFL+LSY+ +L + + + I+ + L M +E+ VW+ L + P
Sbjct: 139 PQLVALGELEFKKAFLLLSYIPGQQLGQVTTADEIRLWKDLPMVAYEAAVWDRLGRRYCP 198
Query: 2733 LLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFAEEM 2554
H Y CHV +G FKGP L+ TH+ +VLGD+NVL VKFA+
Sbjct: 199 QTDRRMLQWDSGK-THYYQCHVAPDGSYTFKGPLLEHTGTHLHKVLGDENVLTVKFAD-- 255
Query: 2553 NIGKGSHAFQGYESI-YHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXSP-VKCYFVR 2380
+ K S + Y ++A+ GI++GLRRYQFFV+KDGG + VKCYF+R
Sbjct: 256 -VPKNSSTYSNDRYFTYKEIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIR 314
Query: 2379 MESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLASV 2200
+S D E PYI + K IHE+R FMHVH +L+ YMARFSLILSKT L++D+ +
Sbjct: 315 TDSTASCDMENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGI 374
Query: 2199 HVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMSNQF 2020
+ IDDI C D DG D+N +P IH+DGTG+ISED+A CP +IFKGKC
Sbjct: 375 TFDPIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLR------ 428
Query: 2019 LDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPSMRKV 1840
SE NI ++ + PLLIQFR+F G A KGT LLNK L PRT+QVRPSM KV
Sbjct: 429 ---SE------NIQEACNQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKV 479
Query: 1839 KSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDAQN 1660
D S S + N+LE+V TSN P+RT LS+ L+ALL YGG+PNE+FL++L N L+++++
Sbjct: 480 SKDPSLSNFSTFNALEVVTTSNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKS 539
Query: 1659 ARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKLPV 1480
Y K AA+ V+L YG+MDD ++MIL GIPL+EP+++ LS+L+K E+ LKAG+LPV
Sbjct: 540 IFYNKHAALNVALNYGEMDDQNAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPV 599
Query: 1479 TDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIKELEL 1300
T+ YYLMGTVDPTG LK +EVCV+LE+GQISG+VLVY++PGLHFGDIH+L A Y+K LE
Sbjct: 600 TESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEE 659
Query: 1299 FVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWV----PMSS 1132
+VG+SKYA+FFP KG RSL DE+A DFDGDMY++SRN +LL +F+ S+PWV P S
Sbjct: 660 YVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSKS 719
Query: 1131 TAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXX 952
+G + P L+ ELE++LF+ FL F S I +AAD WL+ MDRLL L D+ A
Sbjct: 720 NSG---RAPSQLSPEELEEELFEMFLKAGFHASNVIGIAADSWLTIMDRLLILGDERAEE 776
Query: 951 XXXXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGLI 772
L+DIYYDA+DAPK G KV +P EL+ D +PHYME+ K + STSILGLI
Sbjct: 777 KAEMKKKMLKLIDIYYDALDAPKKGDKVYLPNELRPDIFPHYMEREK--KFKSTSILGLI 834
Query: 771 FNKAGSVQTED-NQFNGISKLSCFSRYSESGLSLWKPR--YTNYLSEMAQALEHEIEEFK 601
++ S TE+ + ISKL CF S + K R Y NY SEM QA++ + K
Sbjct: 835 YDFVKSQTTEEPTPSSEISKLPCFEDEPVSEFHMEKCRRWYDNYRSEMTQAMKTD----K 890
Query: 600 EEMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQMGGVGRCSFAWNV 421
+E A+++I++YK Y AA FEDS + ++++ +AL +Y + YDYA GV +C F W V
Sbjct: 891 DESANEVIQRYKQEFYGAAGFEDSKKSLEELYPQALTLYKIVYDYAIHAGVSKCGFVWKV 950
Query: 420 AGRALCMLHASKQDDKSLIPCSRSVLTEILG 328
AG LC + K+ + + C+ SVL E+ G
Sbjct: 951 AGPVLCRFYLMKKMQEKSLVCAPSVLKELWG 981
>ref|XP_006645606.1| PREDICTED: probable RNA-dependent RNA polymerase 4-like [Oryza
brachyantha]
Length = 1004
Score = 782 bits (2019), Expect = 0.0
Identities = 436/924 (47%), Positives = 592/924 (64%), Gaps = 54/924 (5%)
Frame = -3
Query: 2916 SPQLIALGQLEFRQAFLILSYLGRY-----------KLEETISVEFIKQIQWLNMDQFES 2770
SPQ++AL +LEF + F+I +YL K+E+ +SV++I+ ++ L+M FES
Sbjct: 97 SPQMLALEELEFSKIFMIFAYLSWLVSLGLMLFIYEKIEDVLSVDYIRSLKSLSMPHFES 156
Query: 2769 VVWEELRSKCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHL---IFKGPYLQLQRTHMQRV 2599
+W K I +YHC+V + G IFKGPY++ RTH+Q+V
Sbjct: 157 QIWSTFGHKHISSSDRAKNLYSDPGMTKVYHCNVQIRGDTVIKIFKGPYVENTRTHLQKV 216
Query: 2598 LGDDNVLLVKFAEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXX 2419
+GDDNVL+V F E+ + K F Y + YHKVA++GI++GLR Y+FF+YKDGG
Sbjct: 217 IGDDNVLVVNFMEKPSDIKTD--FLTYCAHYHKVAEDGIVLGLRHYRFFLYKDGGKDSKM 274
Query: 2418 XXXXSP---------VKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSK 2266
V+CYFVR ES W D+ PYILS K I ++R +FMH+HT +L K
Sbjct: 275 KEEKRKEKNKKCTSSVRCYFVRTESRWNMDE--PYILSGKTIGQARGLFMHIHTALTLPK 332
Query: 2265 YMARFSLILSKTMKLDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISED 2086
YM+RF+LI+SKT+ LD+DL++V VE+IDD C+D+ N + +GEPLIHTDGTG IS+D
Sbjct: 333 YMSRFALIVSKTITLDVDLSAVRVELIDDEPCLDEHRNFVF-RDGEPLIHTDGTGLISQD 391
Query: 2085 IALKCPHHIFKGKCSTPMSNQFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKG 1906
+ALKC IFKGK P D S++ + + T+E PLLIQ RLF G+A KG
Sbjct: 392 LALKCMSSIFKGKLLKPQDIVDCDESKL------MGYNSTTEYPLLIQLRLFYNGSAVKG 445
Query: 1905 TLLLNKLLPPRTIQVRPSMRKVKSDA---------------------SFSYIQSCNSLEI 1789
T+L++K L P TI +RPSM K+K+D S S +Q NS EI
Sbjct: 446 TVLVDKRLSPGTILIRPSMVKIKTDPKLSSIHSVNSFEIVSARNAKKSLSDVQFVNSFEI 505
Query: 1788 VATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDAQNARYTKLAAIRVSLKYGD 1609
V+TSNRP+RT SR LIALLHYGGVP E+F+ELL+NA++DA+NAR+ A+ ++ Y D
Sbjct: 506 VSTSNRPRRTSTSRILIALLHYGGVPEEFFMELLQNAIEDAENARFDYGDALNIAFSYAD 565
Query: 1608 MDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKLPVTDCYYLMGTVDPTGLLK 1429
M+D + +RMIL GIPL+E Y+Q RL+ + K+ERKG+K GK+P+ +CYYLMGT DPTG+L
Sbjct: 566 MEDSMSARMILAGIPLDELYLQSRLTFMAKQERKGIKEGKIPIDNCYYLMGTADPTGILA 625
Query: 1428 PNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIKELELFVGDSKYAIFFPIKGSR 1249
PNEVCV+L+NGQ+SGDVLVYKHPGLHFGDIHVL A YI LE VG SKY I FP G R
Sbjct: 626 PNEVCVILDNGQLSGDVLVYKHPGLHFGDIHVLKATYIPGLEEVVGCSKYVILFPTTGQR 685
Query: 1248 SLADEMANSDFDGDMYWVSRNSQLLRYFRSSK--PWVPMSSTAGVQQKGPLDLTDRELEK 1075
SLADEMANSDFDGD++W+S N +LL +F+ SK W + +Q GP D + ELE+
Sbjct: 686 SLADEMANSDFDGDIFWISINPKLLEHFKPSKAWEWEQAITPKEAKQMGPQDFNESELER 745
Query: 1074 KLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXXXXXXXXXXXLVDIYYDAV 895
LF +FL RF PSY ++ A++ WL YMDRLLT D LVD+YY A+
Sbjct: 746 LLFHEFLKARFAPSYALATASNNWLVYMDRLLTDPVD-ESEKELIKEKMLKLVDLYYVAL 804
Query: 894 DAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGLIFNKAGS---VQTEDNQFNG 724
DAPKSG KV++P +L +YPH+M +S SY S+SILG +++KA ++ ++ Q G
Sbjct: 805 DAPKSGKKVNIPSDLMVKQYPHFMG--RSSSYHSSSILGKLYDKADDANLLRFDNVQPIG 862
Query: 723 ISKLSCFS-RYSESGL-SLWKPRYTNYLSEMAQALEHEI--EEFKEEMADDIIKKYKWML 556
IS L CF+ R + + +LW+ RY YLS+ ++ L + +E K +++ KKYK ML
Sbjct: 863 ISLLPCFTERVAPPTIKNLWQRRYNEYLSDSSKLLNDKAVDKEEKNMKFEELYKKYKHML 922
Query: 555 YEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQM-GGVGRCSFAWNVAGRALCMLHASKQD 379
Y+A+EFE++PR D+F +A AIY + Y+ A+ RC FAWNVAGRALC +A K +
Sbjct: 923 YDASEFEETPRNFGDVFTDACAIYQIVYEKARRENAAARCCFAWNVAGRALCHYYALKNE 982
Query: 378 DKSLIPCSRSVLTEILG**KFDKR 307
+++ CS +L KF K+
Sbjct: 983 GDTVV-CSLPLLRSY----KFSKK 1001
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 781 bits (2016), Expect = 0.0
Identities = 439/870 (50%), Positives = 568/870 (65%), Gaps = 11/870 (1%)
Frame = -3
Query: 2910 QLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQ-WLNMDQFESVVWEELRSKCIP 2734
Q +ALG+LEFR+ L L++ + + Q++ WL + E L S +
Sbjct: 205 QFVALGELEFRKITL---------LKKRPWLLYGNQVERWLGWELVSVTHSESLPSYLVQ 255
Query: 2733 LLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLVKFAEEM 2554
+ HIYHCHV L+G FKGP+L +TH+QRVLGDDNVL+VKFAE+
Sbjct: 256 YVDWDRRK------THIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDK 309
Query: 2553 NIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXSP-VKCYFVRM 2377
+ S+ G Y K+A++GIL+GLRRY FFV+KDGG + VKCYFVRM
Sbjct: 310 SDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTTSAVKCYFVRM 369
Query: 2376 ESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLASVH 2197
ES+ D+ +PY LS++ + E+R++FMH H VSS++ YMARFSLILSKT+ L IDL++V+
Sbjct: 370 ESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVN 429
Query: 2196 VEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMSNQFL 2017
V+ I DI C D GN+ Y +G+PLIHTDGTGFISED+AL+CP ++FKG+ + +
Sbjct: 430 VQRIGDIPCKDIYGNVIY-RDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKAI 488
Query: 2016 -------DGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVR 1858
+G + L + E PLLIQFRLF G A KGT LLNK LPPRTIQ+R
Sbjct: 489 WQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIR 548
Query: 1857 PSMRKVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNA 1678
SM KV+ D ++ NSLE+V TSN PKRT LSR LIALL+YGGVP EYF+ +L +A
Sbjct: 549 DSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDA 608
Query: 1677 LDDAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLK 1498
L D Q +K AA+RVS+ G+MDDFLV+RMIL GIPL+E Y+Q+RLSVL+KEE+K LK
Sbjct: 609 LKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLK 668
Query: 1497 AGKLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARY 1318
+G+L V +CYYLMGTVDPT L+ EVCV+L NGQI+G VLVY++PGLHFGDIHVL+A+Y
Sbjct: 669 SGRLHVPECYYLMGTVDPTFTLESGEVCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKY 728
Query: 1317 IKELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPM 1138
+++L VG++KYAIFF KG RS+ADE+A DFDGDMYWVSRNSQLL YFR +PW P
Sbjct: 729 VEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPS 788
Query: 1137 SSTAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCA 958
ST V K P + + ELE +LF FL+ RF+PSY SVAAD WL+ MD+ L L ++
Sbjct: 789 PSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERK 848
Query: 957 XXXXXXXXXXXXLVDIYYDAVDAP-KSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSIL 781
L++IYYDA+DAP K G K++VP LKA PH+ME+ K +SY STSIL
Sbjct: 849 EERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGK-NSYVSTSIL 907
Query: 780 GLIFNKAGSVQTEDNQFNGISKLSCF-SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEF 604
G IF+ A Q E + KL CF E WK Y Y +M A++ + +
Sbjct: 908 GQIFDTANMYQEEVPNIE-VQKLPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLD-PDA 965
Query: 603 KEEMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQMGGVGRCSFAWN 424
K A+ IKKYK +LY A E E SPR +++++EALAIY + YD+A V C FAW
Sbjct: 966 KNIAAEATIKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSRSVRNCGFAWK 1025
Query: 423 VAGRALCMLHASKQDDKSLIPCSRSVLTEI 334
VAG AL L+A K ++S C SV+ EI
Sbjct: 1026 VAGSALFKLYAIKHSERS-FHCLPSVMREI 1054
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 778 bits (2008), Expect = 0.0
Identities = 417/872 (47%), Positives = 566/872 (64%), Gaps = 5/872 (0%)
Frame = -3
Query: 2928 GQSISPQLIALGQLEFRQAFLILSYLGRYKL-EETISVEFIKQIQWLNMDQFESVVWEEL 2752
G P L+ALG+LEF++AFL+LSY+G L EE IS + I++ + L M +E+ VW L
Sbjct: 133 GSKYIPPLLALGELEFKKAFLLLSYIGGESLVEEVISGDQIRKWKDLPMVSYEAAVWNRL 192
Query: 2751 RSKCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYLQLQRTHMQRVLGDDNVLLV 2572
+ H Y CHV +G FKG L+ TH+ +VLGDDNVL V
Sbjct: 193 GQRYCSPKERRRPLEGDSGMTHYYQCHVATDGSYKFKGHLLENTGTHLHKVLGDDNVLTV 252
Query: 2571 KFAEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXSP-VK 2395
KF + +G ++ Y S Y +A+ GI+VGLRRY+FFV+KDGG + VK
Sbjct: 253 KF--DKVLGVETYCNDLY-STYKGIAKNGIMVGLRRYRFFVFKDGGKEEKKKDVSTKGVK 309
Query: 2394 CYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDI 2215
CYF+R +S D + PYI + K +HE+R FMHV+T+SSL YM+RFSLILSKT L++
Sbjct: 310 CYFIRTDSTASIDMQNPYIFAGKSMHEARMHFMHVNTLSSLPNYMSRFSLILSKTKTLEV 369
Query: 2214 DLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTP 2035
D+ + E IDDI C D D D+NG+P IH+DGTG+ISED+A CP +IFKGK
Sbjct: 370 DMTGITFEQIDDIHCHDQDDKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRS 429
Query: 2034 MSNQFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRP 1855
+ Q + + + P E PLLIQFR+F G A KGT L NK LPPRT+QVRP
Sbjct: 430 NNIQSKNLNFEGQGPCG------QEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRP 483
Query: 1854 SMRKVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNAL 1675
SM KV D + S + + NSLE+V TSN P++ LSR L+ALL YGGVPN++FL +L+N L
Sbjct: 484 SMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTL 543
Query: 1674 DDAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKA 1495
++++ Y++ AA + ++ YGD D + MIL GIPL+EPY++ RLS L+K ER LKA
Sbjct: 544 EESKTIFYSERAAFKAAINYGD--DQYTADMILVGIPLDEPYLKDRLSYLLKTERNALKA 601
Query: 1494 GKLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYI 1315
G+ P+ + YY+MGTVDPTG LK NE+CV+L +GQISGDVLVY++PGLHFGDIHVL A Y+
Sbjct: 602 GRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYV 661
Query: 1314 KELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMS 1135
K LE +VG++K+A+FFP KG RSL DE+A DFDGDMY++SRN +LL +F+ S+PWV S
Sbjct: 662 KALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSS 721
Query: 1134 STAGVQ-QKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCA 958
+ + + P +L++ ELE++LF FL RF I +AADCWL MD LTL D+ A
Sbjct: 722 KPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESA 781
Query: 957 XXXXXXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILG 778
L+DIYYDA+DAPK G KVD+PP+L+ +PHYME+ + STSILG
Sbjct: 782 KEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILG 841
Query: 777 LIFNKAGSVQTEDNQFNGISKLSCF--SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEF 604
LIF+ S E+ + ISKL F +S + + Y NY SEM+QA+ +
Sbjct: 842 LIFDTVDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYENYRSEMSQAMMETDKVK 901
Query: 603 KEEMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQMGGVGRCSFAWN 424
+ ++ +++I++YK Y AA FEDS + ++++ +ALA+YN+ YDYA GV +C+FAWN
Sbjct: 902 RNQLTNEVIQRYKQDFYGAAGFEDSNKSLEELYPQALALYNVVYDYAIQEGVAKCTFAWN 961
Query: 423 VAGRALCMLHASKQDDKSLIPCSRSVLTEILG 328
VAG LC + K DKS++ S SVL ++LG
Sbjct: 962 VAGPVLCKFYLKKTKDKSVV-ASTSVLKKLLG 992
>sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 4; Short=OsRDR4
Length = 1183
Score = 776 bits (2005), Expect = 0.0
Identities = 433/914 (47%), Positives = 580/914 (63%), Gaps = 55/914 (6%)
Frame = -3
Query: 2919 ISPQLIALGQLEFRQAFLILSYLG--------------RYKLEETISVEFIKQIQWLNMD 2782
+SPQ++ALG+LEFR+ F+I +YL K+E+ +SV+ I+ ++ ++M
Sbjct: 275 VSPQMLALGELEFRKIFMIFAYLSWNKKGVKPPLSTPKSSKIEDVLSVDSIRSLKSMSMA 334
Query: 2781 QFESVVWEELRSKCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHL---IFKGPYLQLQRTH 2611
QFES +W I + +YHC+V++ G IFKGPY++ +RTH
Sbjct: 335 QFESRIWSTFGHDNISSSDRAKNLDSGPGMSKVYHCNVEIRGGTVVKIFKGPYIENRRTH 394
Query: 2610 MQRVLGDDNVLLVKFAEEMNIGKGSHA-FQGYESIYHKVAQEGILVGLRRYQFFVYKDGG 2434
+Q+VLGDDNVL+VKF M I + Y YHKVA+EGI++GLR Y+FF+YKDGG
Sbjct: 395 LQKVLGDDNVLVVKF---MEISSDTETDLSTYLEHYHKVAEEGIVLGLRCYRFFLYKDGG 451
Query: 2433 XXXXXXXXXSP---------VKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTV 2281
V+CYFVR ES W D+ PYILS + I ++R +FMH+ TV
Sbjct: 452 KENKMKEENREEENKKCTSSVRCYFVRTESGWNMDE--PYILSGRTIGQARDLFMHIRTV 509
Query: 2280 SSLSKYMARFSLILSKTMKLDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTG 2101
+L+KYM RF+LI+SKT+ LD+DL+ V V++IDD C+D+ G + +GE LIHTDGTG
Sbjct: 510 LTLAKYMLRFALIVSKTITLDVDLSEVLVKLIDDEPCLDEHGKEVF-RDGERLIHTDGTG 568
Query: 2100 FISEDIALKCPHHIFKGKCSTPMSNQFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKG 1921
ISED+A KC + KGK P S++ + + T+E PLLIQ RLF G
Sbjct: 569 LISEDLAQKCTYSNSKGKLLEPQDIVDCAASKL------MGSNNTTEYPLLIQLRLFYNG 622
Query: 1920 AAFKGTLLLNKLLPPRTIQVRPSMRKVKS---------------------DASFSYIQSC 1804
+A KGT+L++K LPPRTI +RPSM K+K+ S S +QS
Sbjct: 623 SAVKGTVLVDKRLPPRTIHIRPSMLKIKTYPELSGVQSVNSLDIVSARNAKKSLSGVQSV 682
Query: 1803 NSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDAQNARYTKLAAIRVS 1624
NS EIV+TSNR RT S LIALLHYGGVP E+F+ELL+ A+++A NAR+ A+ ++
Sbjct: 683 NSFEIVSTSNRSGRTFTSNNLIALLHYGGVPEEFFMELLQTAIEEADNARFDYAGALNIA 742
Query: 1623 LKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKLPVTDCYYLMGTVDP 1444
Y DM+D + +RMIL GIPLEE Y+Q RL L ERKG+K GK+P+ DCYYLMGT DP
Sbjct: 743 FNYADMEDSMPARMILSGIPLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTADP 802
Query: 1443 TGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIKELELFVGDSKYAIFFP 1264
TG L PNEVCV+L+ GQ+SGDVLVYK+PGLH GDIHVL A Y ++E VG+SK+AI FP
Sbjct: 803 TGKLGPNEVCVILDYGQVSGDVLVYKYPGLHPGDIHVLKATYSSDIEKVVGNSKHAILFP 862
Query: 1263 IKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSSTAGVQQKGPLDLTDRE 1084
G RSLADEMANSDFDGD+YWVS N +LL +F+ SKPWVP + G +QKGP D + E
Sbjct: 863 TTGQRSLADEMANSDFDGDIYWVSLNPKLLEHFKPSKPWVPAITPNGTKQKGPEDFNESE 922
Query: 1083 LEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXXXXXXXXXXXLVDIYY 904
LE+ LF +FL RF PSY + AA WL YMDRLLT+S D LVD+YY
Sbjct: 923 LERVLFHEFLKTRFAPSYARATAATNWLVYMDRLLTVSLD-ESEKKLIEKKMLKLVDLYY 981
Query: 903 DAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGLIFNKAGS---VQTEDNQ 733
A+DAPK G KV++P +L +YPH+M+ +S SY S+SILG I++KAG +++++ Q
Sbjct: 982 LALDAPKMGNKVNIPRDLMVKQYPHFMD--RSPSYHSSSILGKIYDKAGDPKPLRSDNVQ 1039
Query: 732 FNGISKLSCFSR--YSESGLSLWKPRYTNYLSEMAQALEHEI-EEFKEEMADDIIKKYKW 562
IS L CF+ + LW+ RY YL++ + E EE K+ ++ +KYK
Sbjct: 1040 PTSISSLPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEEADEEEKKIKFQELYEKYKH 1099
Query: 561 MLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQ-MGGVGRCSFAWNVAGRALCMLHASK 385
+LY A+EFE++PR DD+F EA AIY +AY+ A+ V RC FAW VAGRALC + K
Sbjct: 1100 LLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFYTVK 1159
Query: 384 QDDKSLIPCSRSVL 343
+ +++ CS +L
Sbjct: 1160 NEGNAVV-CSLQLL 1172
>sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 3; Short=OsRDR3
Length = 1153
Score = 776 bits (2005), Expect = 0.0
Identities = 423/901 (46%), Positives = 572/901 (63%), Gaps = 40/901 (4%)
Frame = -3
Query: 2925 QSISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRS 2746
++ SPQ++AL +L FR+ F++ +YL K+E +SV++I+ +++L+M QFES +W
Sbjct: 286 EAASPQMLALEELGFRKIFMVFAYLASEKIENVLSVDYIRSLKFLSMAQFESQIWRTFGH 345
Query: 2745 KCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHL---IFKGPYLQLQRTHMQRVLGDDNVLL 2575
K I +YHC+V + G IFKGPY++ RTH+Q+V+GDDNVL+
Sbjct: 346 KYIAASDRAKNLDSDPGMTKVYHCNVAIRGDTVVKIFKGPYIENTRTHLQKVVGDDNVLV 405
Query: 2574 VKFAEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS--- 2404
VKF +++ K F Y YHKVA++GI++GLRRY+FFVYKDGG
Sbjct: 406 VKFMGKLSDTKTD--FSTYCEHYHKVAEDGIVLGLRRYRFFVYKDGGKEEKLKQEKIEDK 463
Query: 2403 -----PVKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLIL 2239
PV CYFVR ES W D+ PYILS + + ++R +FMH+ + +L+KYMARF+LIL
Sbjct: 464 NKCTSPVMCYFVRTESGWNMDE--PYILSGRTVGQARELFMHISSAPTLAKYMARFALIL 521
Query: 2238 SKTMKLDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHI 2059
SKT+ D DL++V+V I D C+D GN+ + + EPLIHTDGTG +S D+AL CP I
Sbjct: 522 SKTITWDADLSAVYVRRIKDEPCMDRHGNVVHKDQ-EPLIHTDGTGLVSVDLALNCPTSI 580
Query: 2058 FKGKCSTPMSNQFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLP 1879
FKGK P PLL+QFRLF G+A KGT+L+++ LP
Sbjct: 581 FKGKFLKPQ-------------------------PLLMQFRLFYNGSAVKGTVLVDRRLP 615
Query: 1878 PRTIQVRPSMRKVKSDA---------------------SFSYIQSCNSLEIVATSNRPKR 1762
P TI +RPSM K+++ S S +QS NS EIV+TSNRP+R
Sbjct: 616 PATILIRPSMVKIETHPELSGVRSVNSSEIVSARNAKKSLSGVQSVNSFEIVSTSNRPRR 675
Query: 1761 TCLSRYLIALLHYGGVPNEYFLELLKNALDDAQNARYTKLAAIRVSLKYGDMDDFLVSRM 1582
T SR+LI LL YGGVP EYFLELL++A++ A+NA Y A+R++ Y DM+D + +RM
Sbjct: 676 TLTSRFLITLLCYGGVPEEYFLELLQSAIEGAENACYDYEDALRIAFSYADMEDSMSARM 735
Query: 1581 ILCGIPLEEPYMQFRLSVLMKEERKGLKAGKLPVTDCYYLMGTVDPTGLLKPNEVCVVLE 1402
IL GIPLEE Y+Q RL + ++ERKG+K GK+P+ +CYYLM T DPTG L+PNEVCV+LE
Sbjct: 736 ILSGIPLEESYLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILE 795
Query: 1401 NGQISGDVLVYKHPGLHFGDIHVLSARYIKELEL-FVGDSKYAIFFPIKGSRSLADEMAN 1225
NGQ SGDVLVYKHPGLHFGDIHVL A YI++LE +VG +KYAI FPI G RSLADEMAN
Sbjct: 796 NGQFSGDVLVYKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMAN 855
Query: 1224 SDFDGDMYWVSRNSQLLRYFRSSKPWVPMSSTAGVQQKGPLDLTDRELEKKLFDQFLANR 1045
SDFDGD+YWVS+N +LL +F+ S+PWV +QK P D + +LE+ LF +FL R
Sbjct: 856 SDFDGDIYWVSKNPKLLEHFKPSEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEFLKTR 915
Query: 1044 FKPSYTISVAADCWLSYMDRLLTLSDDCAXXXXXXXXXXXXLVDIYYDAVDAPKSGLKVD 865
F PS+ + AAD WL+YMDRLLT S D LVD+YY A+DAPK+G KV+
Sbjct: 916 FTPSFALGTAADSWLAYMDRLLTDSLD-EIEKKLIEEKMLKLVDLYYLALDAPKTGNKVN 974
Query: 864 VPPELKADKYPHYMEKLKSDSYTSTSILGLIFNKAGSVQTEDN---QFNGISKLSCFSRY 694
+P +L +YPH+M +S SY S+SILG I++KA V++ + Q G+S L CF
Sbjct: 975 IPSDLMVKQYPHFMG--RSFSYHSSSILGQIYDKAEDVESLRSCNVQPIGVSLLPCFMER 1032
Query: 693 S--ESGLSLWKPRYTNYLSEMAQALEHEIEEFKEEMA-DDIIKKYKWMLYEAAEFEDSPR 523
+ LW+ RY YL++ +++ + M ++ +KYK MLY+A+EFE + R
Sbjct: 1033 EAPPAARHLWQHRYEEYLTDSTMLYRAMVDKEERNMKFQELYEKYKHMLYDASEFEQTQR 1092
Query: 522 KRDDIFEEALAIYNLAYDYAQMGG-VGRCSFAWNVAGRALCMLHASKQDDKSLIPCSRSV 346
DD+F EA IY + Y+ A+ RC FAW VAGRALC +A K + + + CS +
Sbjct: 1093 DPDDVFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTAL-CSLPL 1151
Query: 345 L 343
L
Sbjct: 1152 L 1152
>ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
3-like [Oryza brachyantha]
Length = 1109
Score = 776 bits (2003), Expect = 0.0
Identities = 429/895 (47%), Positives = 573/895 (64%), Gaps = 35/895 (3%)
Frame = -3
Query: 2922 SISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSK 2743
S+SPQ++AL +LEF++ F+I +YLG K+E +SV++I+ + ++ M QFES +W K
Sbjct: 240 SVSPQMLALEELEFKKIFMIFAYLGCNKIETVLSVDYIRSLXFMPMAQFESKIWRTFGYK 299
Query: 2742 CIPLLXXXXXXXXXXXKAHIYHCHVDLEGHLI---FKGPYLQLQRTHMQRVLGDDNVLLV 2572
I + +YHC+V++ G + FKGPY+ RTH+Q+V+GDDNVL+V
Sbjct: 300 NIAVSDRAKNLDSDPLTTKVYHCNVEIRGDSVVTLFKGPYIGNTRTHLQKVVGDDNVLVV 359
Query: 2571 KFAEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS---- 2404
KF E+++ K F Y YHKVA +GIL+GLRRYQFF+YKDGG
Sbjct: 360 KFMEKLSETKTD--FSTYCEHYHKVANDGILLGLRRYQFFIYKDGGKEKKMIEGEKRNSS 417
Query: 2403 -PVKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTM 2227
V+CYFVR ES W D+ PYILS K + ++R +FMH++T +L+KYMAR +LILSKT+
Sbjct: 418 STVRCYFVRTESGWNTDE--PYILSGKTVGQARELFMHINTAPTLAKYMARLALILSKTI 475
Query: 2226 KLDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGK 2047
LD DL+ V V +ID+ C+D+ GN+ +GEPLI TDGTG ISED+ALKCP IFKGK
Sbjct: 476 TLDADLSQVLVRLIDE-PCLDEHGNVVL-RDGEPLIRTDGTGLISEDLALKCPTSIFKGK 533
Query: 2046 CSTPMSNQFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTI 1867
PLL+QFRLF G+A KGT+L+++ L P I
Sbjct: 534 -------------------------FLKSQPLLMQFRLFYYGSAVKGTVLVDRRLSPGNI 568
Query: 1866 QVRPSMRKV-------------------KSDASFSYIQSCNSLEIVATSNRPKRTCLSRY 1744
VRPSM + + S S +QS NS EIV+TSN P+RT SR+
Sbjct: 569 LVRPSMLRSYPELSDVQSVNSSEIVFARNAKKSLSGVQSVNSFEIVSTSNXPRRTLTSRF 628
Query: 1743 LIALLHYGGVPNEYFLELLKNALDDAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIP 1564
LIALL YGGVP EYFLELL+NA++ A+NA Y A++++ Y DM+D + +RMIL GIP
Sbjct: 629 LIALLCYGGVPEEYFLELLENAIEGAENACYYYEDALKIAFSYADMEDSISARMILSGIP 688
Query: 1563 LEEPYMQFRLSVLMKEERKGLKAGKLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISG 1384
LEE Y+Q RL+ + ++ERKG+K GK+P+ +CYYLMGT DPTG L PNEVCV+LENGQ+ G
Sbjct: 689 LEESYLQSRLAFMARQERKGIKQGKIPIDECYYLMGTTDPTGTLGPNEVCVILENGQLCG 748
Query: 1383 DVLVYKHPGLHFGDIHVLSARYIKELE-LFVGDSKYAIFFPIKGSRSLADEMANSDFDGD 1207
DVLVYKHPGLHFGDIHVL A YIK+LE +VG SKYAI FP G RSLADEMANSDFDGD
Sbjct: 749 DVLVYKHPGLHFGDIHVLKATYIKDLEKKYVGYSKYAILFPTSGPRSLADEMANSDFDGD 808
Query: 1206 MYWVSRNSQLLRYFRSSKPWVPMSSTAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYT 1027
MYWVS+N +LL +F+ S+PWV + +QK P D + +LE+ LF +FL RF PSY
Sbjct: 809 MYWVSKNPKLLEHFKPSEPWVETITPKRRKQKKPQDFNESKLERLLFHEFLKTRFTPSYA 868
Query: 1026 ISVAADCWLSYMDRLLTLSDDCAXXXXXXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELK 847
+ AAD WL+Y+DR LT S D LVD+YYDA+DAPK+G KV++ L
Sbjct: 869 LGTAADSWLAYVDRXLTGSLD-ESEKKIMKEKMTKLVDLYYDALDAPKTGNKVNIASGLI 927
Query: 846 ADKYPHYMEKLKSDSYTSTSILGLIFNKAGSVQT---EDNQFNGISKLSCFSRYS--ESG 682
+YPH+M ++ SY S+SILG I+++A +++ ++ +GIS L CF+
Sbjct: 928 TKRYPHFMGRI--PSYHSSSILGQIYDRAEDIESLRYDNVAPSGISLLPCFTERDAPPET 985
Query: 681 LSLWKPRYTNYLSEMAQALEHEIEEFKEEMADDIIKKYKWMLYEAAEFEDSPRKRDDIFE 502
LW+ RY YL++ E + EE + + +KYK MLY+A+EFE +PR DD+F
Sbjct: 986 KRLWQQRYEEYLTDSRLLYEVDKEE-RNMKFQKLYEKYKRMLYDASEFEQTPRGFDDVFT 1044
Query: 501 EALAIYNLAYDYAQM--GGVGRCSFAWNVAGRALCMLHASKQDDKSLIPCSRSVL 343
EA IY + Y+ A+ G GRC FAW VAGRAL +A K + +++ CS +L
Sbjct: 1045 EACVIYQIVYEEARSYGGDAGRCGFAWKVAGRALRHFYALKNEGDTVL-CSLPLL 1098
>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1405
Score = 776 bits (2003), Expect = 0.0
Identities = 438/867 (50%), Positives = 566/867 (65%), Gaps = 8/867 (0%)
Frame = -3
Query: 2907 LIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSKCIPLL 2728
L ALG+LE+R+ FLILSY G KL + I E I+ + L M FES VWE L KCI
Sbjct: 548 LAALGELEYRRQFLILSYAGGMKLRDLIVAEAIRHWKDLPMVMFESTVWEHLGRKCISTE 607
Query: 2727 XXXXXXXXXXXKAHIYHCHVDLEGHLIFKGPYL-QLQRTHMQRVLGDDNVLLVKFAEEMN 2551
H+YHC+V+++G FKGPYL +++RT +Q+ LGDDNVL+VKFA+E
Sbjct: 608 DRRLYFDWDSGSTHVYHCYVNVDGSYRFKGPYLYKIRRTLLQKELGDDNVLMVKFAKEEV 667
Query: 2550 IGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS-PVKCYFVRME 2374
S A Y + Y KVA+EGILVGLRRY+FFV+KDGG S PVKCYFVR+
Sbjct: 668 QRGQSGACHNYPT-YMKVAREGILVGLRRYRFFVFKDGGNEEKKKNPTSSPVKCYFVRVA 726
Query: 2373 SNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLDIDLASVHV 2194
S+ D+ Y LS ++E+R +FMH HT++S+ YMARFSLILSKTM L D + V V
Sbjct: 727 SDAAIDKGVYYRLSHMTMYEARCLFMHAHTLASIDNYMARFSLILSKTMSLKADWSLVKV 786
Query: 2193 EMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCSTPMSNQFL- 2017
E+ID+ C+D+ GN Y + +PLIHTDGTGFISED+AL CP KG+ + + L
Sbjct: 787 EIIDEEYCLDESGNCIYRDE-KPLIHTDGTGFISEDLALLCPKIEAKGQWISDEHMKGLP 845
Query: 2016 DGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVRPSMRKVK 1837
D E+ + N T E PLLIQ RLF+ G+A KGTLL+NK L P IQ+RPSM KVK
Sbjct: 846 DPDELDDTGKNRAGLRTEEPPLLIQCRLFHNGSASKGTLLVNKKLQPNRIQIRPSMLKVK 905
Query: 1836 SDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNALDDAQNA 1657
+D S Q+ NSLEIV TS P+ T LSR LIALL +GGVP E+F+++L AL+D+
Sbjct: 906 TDPVISNNQTLNSLEIVGTSTPPRNTHLSRILIALLVHGGVPEEFFMQILNKALEDSHGV 965
Query: 1656 RYTKLAAIRVSLKYGDMDD-FLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKLPV 1480
K AA++V+ KYG+MDD FL MI GIPLEE Y+++RLSVLMKEE L+ G+L +
Sbjct: 966 FCKKRAALKVAEKYGEMDDNFLGRLMISFGIPLEESYLRYRLSVLMKEENNSLRKGRLYI 1025
Query: 1479 TDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARYIKELEL 1300
D Y LMGT DPTG LK +EVC +GQ+SG VLVY++PGLH GDIHVL A Y+KE+E
Sbjct: 1026 PDSYNLMGTADPTGTLKEDEVC----DGQLSGKVLVYRYPGLHIGDIHVLKATYVKEIEY 1081
Query: 1299 FVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMS-STAG 1123
VG++KY IFF KG RS+ADEM DFDGD+YWVSRN QLL +++ S+PW+ S ST
Sbjct: 1082 IVGNAKYGIFFSCKGPRSIADEMGGGDFDGDLYWVSRNPQLLEWYKPSEPWIEASISTKK 1141
Query: 1122 VQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXXXX 943
+ P D + +LE LF FL RF+PS+ +S AAD WL++MD LTL D
Sbjct: 1142 NPSRCPSDHSPEDLEDVLFRSFLTTRFEPSFAMSEAADNWLAWMDHFLTLGDSNIHEKNN 1201
Query: 942 XXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTSTSILGLIFNK 763
LVD+YY A+DA K G+KVDVP ELK +PHYM K+ SY STSILG I+N+
Sbjct: 1202 VKEKILQLVDLYYTALDAAKKGVKVDVPKELKVSCFPHYMG--KNRSYPSTSILGSIYNR 1259
Query: 762 AGSVQTEDNQFNGISKLSCF--SRYSESGLSLWKPRYTNYLSEMAQALEHEIEEFKEEMA 589
QTED + KL F + ++ L W + Y EMA AL+ + ++ K + A
Sbjct: 1260 VDEHQTEDRSLKEVEKLPAFDENEVPDACLDKWAELHRQYRKEMASALDDDDKQSKNQSA 1319
Query: 588 DDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYA-QMGGVGRCSFAWNVAGR 412
D +I+KY+ +LYEA +FE+S R ++I+ EA AIY++ YD+A ++G V CSFAW VAG+
Sbjct: 1320 DVVIRKYRKILYEANDFEESRRPIEEIYNEAHAIYHVCYDHAKRVGNVKVCSFAWRVAGK 1379
Query: 411 ALCMLHASKQDDKSLIPCSRSVLTEIL 331
ALC LHA +++ S SVL EIL
Sbjct: 1380 ALCQLHARNNNERFCTIVS-SVLMEIL 1405
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 773 bits (1995), Expect = 0.0
Identities = 422/877 (48%), Positives = 567/877 (64%), Gaps = 15/877 (1%)
Frame = -3
Query: 2913 PQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRSKCIP 2734
PQL+ALG+LEF++ FL+LSY+ + + I+ + I+ + L M ++E+ VW+ L P
Sbjct: 129 PQLVALGELEFKKVFLLLSYIPGQHVGQVITADEIRLWKDLPMVEYEAAVWDRLGRHYCP 188
Query: 2733 LLXXXXXXXXXXXKAHIYHCHVDLEGHLIFK------GPYLQLQRTHMQRVLGDDNVLLV 2572
K H Y C+V G FK GP L+ TH+ +VLGDDNVL V
Sbjct: 189 Q-KDRRMLQWDSGKTHYYQCNVAPNGSYTFKVLSALQGPLLEHTGTHLHKVLGDDNVLTV 247
Query: 2571 KFAEEMNIGKGSHAFQ-GYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXSP-V 2398
KFA+ + K S + + Y +A+ GI++GLRRYQFFV+KDGG + V
Sbjct: 248 KFAD---VQKSSSTYSIDHYFTYKGIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKV 304
Query: 2397 KCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLILSKTMKLD 2218
KCYF+R +S D + PYIL+ K I+E+R FMHVH +L+ YMARFSLILSKT L+
Sbjct: 305 KCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLE 364
Query: 2217 IDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHIFKGKCST 2038
+D+ + + IDDI C D DG D+N +P IH+DGTG+ISED+A CP +IFKGKC
Sbjct: 365 VDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLR 424
Query: 2037 PMSNQFLDGSEIAEEPLNITKSLTSEAPLLIQFRLFNKGAAFKGTLLLNKLLPPRTIQVR 1858
S I ++ + PLLIQFR+F G A KGT LLNK L PRT+QVR
Sbjct: 425 SES---------------IQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVR 469
Query: 1857 PSMRKVKSDASFSYIQSCNSLEIVATSNRPKRTCLSRYLIALLHYGGVPNEYFLELLKNA 1678
PSM KV D S S + N+LE+V TSN PKRT LS+ L+ALL YGG+PNE+FL++L N
Sbjct: 470 PSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNT 529
Query: 1677 LDDAQNARYTKLAAIRVSLKYGDMDDFLVSRMILCGIPLEEPYMQFRLSVLMKEERKGLK 1498
L+++++ Y K AA+ +L YG+MDD ++MIL GIPL+EP+++ LS+L+K E+ LK
Sbjct: 530 LEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHLKNYLSILLKTEKNDLK 589
Query: 1497 AGKLPVTDCYYLMGTVDPTGLLKPNEVCVVLENGQISGDVLVYKHPGLHFGDIHVLSARY 1318
AGKLPVT+ YYLMGTVDPTG LK +EVCV+LE+GQISG+VLVY++PGLHFGDIH+L A Y
Sbjct: 590 AGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATY 649
Query: 1317 IKELELFVGDSKYAIFFPIKGSRSLADEMANSDFDGDMYWVSRNSQLLRYFRSSKPWV-- 1144
+K LE +VG+SK+A+FFP KG RSL DE+A DFDGDMY++SRN +LL F+ S+PWV
Sbjct: 650 VKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSL 709
Query: 1143 --PMSSTAGVQQKGPLDLTDRELEKKLFDQFLANRFKPSYTISVAADCWLSYMDRLLTLS 970
P S +G + P L+ ELE++LF+ FL F S I +AAD WL+ MDR L L
Sbjct: 710 TPPSKSNSG---RAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILG 766
Query: 969 DDCAXXXXXXXXXXXXLVDIYYDAVDAPKSGLKVDVPPELKADKYPHYMEKLKSDSYTST 790
DD A L+DIYYDA+DAPK G KV +P +LK D +PHYME+ K + ST
Sbjct: 767 DDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDK--KFQST 824
Query: 789 SILGLIFNKAGSVQTED-NQFNGISKLSCFSRYSESGLSLWKPR--YTNYLSEMAQALEH 619
SILGLIF+ S TE+ + + ISKL CF S + K R Y NY +EM QA++
Sbjct: 825 SILGLIFDFVKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKT 884
Query: 618 EIEEFKEEMADDIIKKYKWMLYEAAEFEDSPRKRDDIFEEALAIYNLAYDYAQMGGVGRC 439
+ K+E A+++I++YK Y AA FEDS + ++++ +ALA+Y + YDYA GV +C
Sbjct: 885 D----KDESANEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYAIHAGVSKC 940
Query: 438 SFAWNVAGRALCMLHASKQDDKSLIPCSRSVLTEILG 328
F W VAG LC + +K+ + + C+ SVL E+ G
Sbjct: 941 RFVWKVAGPVLCRFYLNKKMQEKCLVCAPSVLKELWG 977
>gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indica Group]
Length = 1155
Score = 769 bits (1985), Expect = 0.0
Identities = 417/904 (46%), Positives = 568/904 (62%), Gaps = 39/904 (4%)
Frame = -3
Query: 2925 QSISPQLIALGQLEFRQAFLILSYLGRYKLEETISVEFIKQIQWLNMDQFESVVWEELRS 2746
++ SPQ++AL +L FR+ F++ +YL K+E +SV++I+ +++L+M QFES +W
Sbjct: 279 EAASPQMLALEELGFRKIFMVFAYLASEKIENVLSVDYIRSLKFLSMVQFESQIWRTFGH 338
Query: 2745 KCIPLLXXXXXXXXXXXKAHIYHCHVDLEGHL---IFKGPYLQLQRTHMQRVLGDDNVLL 2575
K I +YHC+V + G IFKGPY++ RTH+ +V+GDDNVL+
Sbjct: 339 KYIAASDRAKNLDSDPGMTKVYHCNVAIRGDTVVKIFKGPYIENTRTHLHKVVGDDNVLV 398
Query: 2574 VKFAEEMNIGKGSHAFQGYESIYHKVAQEGILVGLRRYQFFVYKDGGXXXXXXXXXS--- 2404
VKF +++ K F Y YHKVA++GI++GLRRY+FFVYKDGG
Sbjct: 399 VKFMGKLSDTKTD--FSTYCEHYHKVAEDGIVLGLRRYRFFVYKDGGKEEKLKQEKIEDK 456
Query: 2403 -----PVKCYFVRMESNWIADQEKPYILSDKFIHESRAVFMHVHTVSSLSKYMARFSLIL 2239
PV+CYFVR ES W D+ PYILS + + ++R +FMH+ + +L+KYMARF+LIL
Sbjct: 457 NKCTSPVRCYFVRTESGWNMDE--PYILSGRTVGQARELFMHISSAPTLAKYMARFALIL 514
Query: 2238 SKTMKLDIDLASVHVEMIDDIVCVDDDGNISYDENGEPLIHTDGTGFISEDIALKCPHHI 2059
SKT+ LD DL++V+V I D C+D GN+ + + E LIHTDGTG +S D+AL CP I
Sbjct: 515 SKTITLDADLSAVYVRRIKDEPCMDRHGNVVHKDQ-ELLIHTDGTGLVSVDLALNCPTSI 573
Query: 2058 FKGKCSTPMSNQFLDGSEIAEEPLNITK--SLTSEAPLLIQFRLFNKGAAFKGTLLLNKL 1885
FKGK P D SE P ++ + SLT+E PLL+QFRLF G+A KGT+L+++
Sbjct: 574 FKGKFLKPQGIATCDESETVMRPNSLKRHRSLTAEHPLLMQFRLFYNGSAVKGTVLVDRR 633
Query: 1884 LPPRTIQVRPSMRKVKSDA---------------------SFSYIQSCNSLEIVATSNRP 1768
LPP TI +RPSM K+++ S S +QS NS EIV+TSNRP
Sbjct: 634 LPPATILIRPSMVKIETHPELSGVRSVNSSEIVSARNAKKSLSGVQSVNSFEIVSTSNRP 693
Query: 1767 KRTCLSRYLIALLHYGGVPNEYFLELLKNALDDAQNARYTKLAAIRVSLKYGDMDDFLVS 1588
+RT SR+LI LL YGGVP EYFLELL++A++ A+NA Y A+R++ Y DM+D + +
Sbjct: 694 RRTLTSRFLITLLCYGGVPEEYFLELLQSAIEGAENACYDYEDALRIAFSYADMEDSMSA 753
Query: 1587 RMILCGIPLEEPYMQFRLSVLMKEERKGLKAGKLPVTDCYYLMGTVDPTGLLKPNEVCVV 1408
RMIL GIPLEE Y+Q RL + ++ERKG+K GK+P+ +CYYLM T DPTG L+PNEVCV+
Sbjct: 754 RMILSGIPLEESYLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVI 813
Query: 1407 LENGQISGDVLVYKHPGLHFGDIHVLSARYIKELEL-FVGDSKYAIFFPIKGSRSLADEM 1231
LENGQ SGDVLVYKHPGLHFGDIHVL A YI++LE +VG +KYAI FPI G RSLADEM
Sbjct: 814 LENGQFSGDVLVYKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEM 873
Query: 1230 ANSDFDGDMYWVSRNSQLLRYFRSSKPWVPMSSTAGVQQKGPLDLTDRELEKKLFDQFLA 1051
ANSDFDGD+YWVS+N +LL +F+ S+PWV +QK P D + +LE+ LF +FL
Sbjct: 874 ANSDFDGDIYWVSKNPKLLEHFKPSEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEFLK 933
Query: 1050 NRFKPSYTISVAADCWLSYMDRLLTLSDDCAXXXXXXXXXXXXLVDIYYDAVDAPKSGLK 871
RF PS+ + AAD WL+YMDRLLT S D LVD+YY A+DAPK+G K
Sbjct: 934 TRFTPSFALGTAADSWLAYMDRLLTDSLD-EIEKKLIEEKMIKLVDLYYLALDAPKTGNK 992
Query: 870 VDVPPELKADKYPHYMEKLKSDSYTSTSILGLIFNKAGSVQTEDNQFNGISKLSCFSRYS 691
V++P +L +YPH+M + + +S L CF
Sbjct: 993 VNIPSDLMVKQYPHFMGR--------------------------SFICRVSLLPCFMERE 1026
Query: 690 --ESGLSLWKPRYTNYLSEMAQALEHEIEEFKEEMA-DDIIKKYKWMLYEAAEFEDSPRK 520
+ LW+ RY YL++ +++ + M ++ +KYK MLY+A+EFE + R
Sbjct: 1027 APPAARHLWQHRYEEYLTDSTMLYRAMVDKEERNMKFQELYEKYKHMLYDASEFEQTQRD 1086
Query: 519 RDDIFEEALAIYNLAYDYAQMGG-VGRCSFAWNVAGRALCMLHASKQDDKSLIPCSRSVL 343
DD+F EA IY + Y+ A+ RC FAW VAGRALC +A K + + + CS +L
Sbjct: 1087 PDDVFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTAL-CSLPLL 1145
Query: 342 TEIL 331
+I+
Sbjct: 1146 RKII 1149