BLASTX nr result

ID: Zingiber24_contig00013013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00013013
         (225 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004952707.1| PREDICTED: polyadenylate-binding protein RBP...    59   1e-07
dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica G...    62   1e-07
ref|XP_006845940.1| hypothetical protein AMTR_s00157p00080130 [A...    61   2e-07
ref|XP_004957051.1| PREDICTED: polyadenylate-binding protein RBP...    61   2e-07
ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [S...    59   3e-07
ref|XP_006648763.1| PREDICTED: polyadenylate-binding protein RBP...    60   3e-07
ref|XP_006660711.1| PREDICTED: polyadenylate-binding protein RBP...    60   4e-07
ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding prote...    60   4e-07
ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group] g...    60   4e-07
ref|XP_004975779.1| PREDICTED: polyadenylate-binding protein RBP...    59   5e-07
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...    59   5e-07
ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding prote...    59   5e-07
emb|CBI16387.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...    59   5e-07
ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding prote...    58   6e-07
ref|XP_006653468.1| PREDICTED: polyadenylate-binding protein RBP...    59   7e-07
gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]         59   7e-07
ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group] g...    59   7e-07
ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [S...    59   7e-07
gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indi...    59   7e-07

>ref|XP_004952707.1| PREDICTED: polyadenylate-binding protein RBP47C'-like [Setaria
           italica]
          Length = 428

 Score = 58.9 bits (141), Expect(2) = 1e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           E+ RTIWVGDLQYWMDENYLHSCFG
Sbjct: 101 EDNRTIWVGDLQYWMDENYLHSCFG 125



 Score = 22.7 bits (47), Expect(2) = 1e-07
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 104 TQPPPEVRGCGGRRGE 151
           T PPP   G GG  GE
Sbjct: 86  TPPPPPSAGSGGNGGE 101


>dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 345

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = +3

Query: 126 GDAAADEEKRTIWVGDLQYWMDENYLHSCFGHT 224
           G     EE +TIWVGDL YWMDENYLHSCFG+T
Sbjct: 10  GGGGGQEENKTIWVGDLHYWMDENYLHSCFGYT 42


>ref|XP_006845940.1| hypothetical protein AMTR_s00157p00080130 [Amborella trichopoda]
           gi|548848595|gb|ERN07615.1| hypothetical protein
           AMTR_s00157p00080130 [Amborella trichopoda]
          Length = 291

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 117 QKCGDAAADEEKRTIWVGDLQYWMDENYLHSCFGHT 224
           Q+   A + EE +++WVGDLQYWMDENYL+SCFGHT
Sbjct: 67  QQQQQAQSSEENKSLWVGDLQYWMDENYLNSCFGHT 102


>ref|XP_004957051.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Setaria
           italica]
          Length = 437

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 135 AADEEKRTIWVGDLQYWMDENYLHSCFGHT 224
           A  EE +T+WVGDL YWMDENYLHSCFG+T
Sbjct: 103 AGQEENKTVWVGDLHYWMDENYLHSCFGYT 132


>ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
           gi|241932144|gb|EES05289.1| hypothetical protein
           SORBIDRAFT_04g023540 [Sorghum bicolor]
          Length = 435

 Score = 58.9 bits (141), Expect(2) = 3e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           E+ RTIWVGDLQYWMDENYLHSCFG
Sbjct: 106 EDNRTIWVGDLQYWMDENYLHSCFG 130



 Score = 21.2 bits (43), Expect(2) = 3e-07
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 110 PPPEVRGCGGRRGE 151
           PPP   G GG  GE
Sbjct: 93  PPPPPAGSGGNGGE 106


>ref|XP_006648763.1| PREDICTED: polyadenylate-binding protein RBP47-like [Oryza
           brachyantha]
          Length = 378

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = +3

Query: 126 GDAAADEEKRTIWVGDLQYWMDENYLHSCFG 218
           G   A +E RTIWVGDLQYWMDENYLH+CFG
Sbjct: 46  GGNGAGDENRTIWVGDLQYWMDENYLHNCFG 76


>ref|XP_006660711.1| PREDICTED: polyadenylate-binding protein RBP47-like [Oryza
           brachyantha]
          Length = 344

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFGHT 224
           EE +TIWVGDL YWMDENYLHSCFG+T
Sbjct: 14  EENKTIWVGDLHYWMDENYLHSCFGYT 40


>ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Brachypodium distachyon]
          Length = 431

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFGHT 224
           EE +TIWVGDL YWMDENYLHSCFG+T
Sbjct: 101 EENKTIWVGDLHYWMDENYLHSCFGYT 127


>ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
           gi|113631636|dbj|BAF25317.1| Os09g0462700, partial
           [Oryza sativa Japonica Group]
          Length = 441

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFGHT 224
           EE +TIWVGDL YWMDENYLHSCFG+T
Sbjct: 112 EENKTIWVGDLHYWMDENYLHSCFGYT 138


>ref|XP_004975779.1| PREDICTED: polyadenylate-binding protein RBP47-like [Setaria
           italica]
          Length = 420

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 138 ADEEKRTIWVGDLQYWMDENYLHSCFG 218
           A EE +TIWVGDLQYWMDENYLHSCFG
Sbjct: 93  ACEENKTIWVGDLQYWMDENYLHSCFG 119


>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 438

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFGHT 224
           EE RT+W+GDLQYW+DENYLHSCF HT
Sbjct: 38  EEVRTLWIGDLQYWVDENYLHSCFAHT 64


>ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Brachypodium distachyon]
          Length = 428

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 138 ADEEKRTIWVGDLQYWMDENYLHSCFG 218
           A EE +TIWVGDLQYWMDENYLHSCFG
Sbjct: 99  ACEENKTIWVGDLQYWMDENYLHSCFG 125


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFGHT 224
           EE RT+W+GDLQYW+DENYLHSCF HT
Sbjct: 38  EEVRTLWIGDLQYWVDENYLHSCFAHT 64


>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 447

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFGHT 224
           EE RT+W+GDLQYW+DENYLHSCF HT
Sbjct: 38  EEVRTLWIGDLQYWVDENYLHSCFAHT 64


>ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Brachypodium distachyon]
          Length = 421

 Score = 57.8 bits (138), Expect(2) = 6e-07
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           ++ RTIWVGDLQYWMDENYLHSCFG
Sbjct: 96  DDNRTIWVGDLQYWMDENYLHSCFG 120



 Score = 21.2 bits (43), Expect(2) = 6e-07
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 104 TQPPPEVRGCGGRRGE 151
           T PPP   G GG  G+
Sbjct: 81  TPPPPSGGGSGGNGGD 96


>ref|XP_006653468.1| PREDICTED: polyadenylate-binding protein RBP47-like [Oryza
           brachyantha]
          Length = 409

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           EE +TIWVGDLQYWMDENYLHSCFG
Sbjct: 84  EENKTIWVGDLQYWMDENYLHSCFG 108


>gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
          Length = 430

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           E+ RTIWVGDLQYWMDENYLHSCFG
Sbjct: 101 EDNRTIWVGDLQYWMDENYLHSCFG 125


>ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
           gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa
           Japonica Group]
          Length = 387

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           EE +TIWVGDLQYWMDENYLHSCFG
Sbjct: 62  EENKTIWVGDLQYWMDENYLHSCFG 86


>ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
           gi|241937753|gb|EES10898.1| hypothetical protein
           SORBIDRAFT_06g018280 [Sorghum bicolor]
          Length = 423

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           EE +TIWVGDLQYWMDENYLHSCFG
Sbjct: 98  EENKTIWVGDLQYWMDENYLHSCFG 122


>gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
          Length = 426

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +3

Query: 144 EEKRTIWVGDLQYWMDENYLHSCFG 218
           EE +TIWVGDLQYWMDENYLHSCFG
Sbjct: 101 EENKTIWVGDLQYWMDENYLHSCFG 125


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