BLASTX nr result
ID: Zingiber24_contig00012833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00012833
(391 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri... 97 2e-18
gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus... 96 5e-18
ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloropl... 96 5e-18
ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula] ... 96 5e-18
ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloropl... 94 1e-17
gb|AFK42365.1| unknown [Medicago truncatula] 94 1e-17
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl... 94 1e-17
ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloropl... 94 1e-17
gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vu... 94 2e-17
gb|EOX96750.1| RNA-binding family protein [Theobroma cacao] 94 2e-17
ref|XP_006854941.1| hypothetical protein AMTR_s00052p00146290 [A... 92 5e-17
ref|XP_006291723.1| hypothetical protein CARUB_v10017892mg [Caps... 91 1e-16
ref|XP_004306507.1| PREDICTED: 30S ribosomal protein 2, chloropl... 90 3e-16
ref|XP_006439065.1| hypothetical protein CICLE_v10032498mg [Citr... 90 4e-16
ref|XP_004515536.1| PREDICTED: 30S ribosomal protein 2, chloropl... 89 5e-16
ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Popu... 89 5e-16
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides] 89 5e-16
gb|EMJ20051.1| hypothetical protein PRUPE_ppa010401mg [Prunus pe... 89 6e-16
ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloropl... 89 8e-16
tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea m... 88 1e-15
>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547691|gb|EEF49184.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 256
Score = 97.4 bits (241), Expect = 2e-18
Identities = 51/77 (66%), Positives = 58/77 (75%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK+VTS++L FFSEKG VLSAKVSRVP EEDVEAAI+
Sbjct: 180 HKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAIS 239
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQKIRVN+A
Sbjct: 240 SFNNSLLEGQKIRVNKA 256
>gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus vulgaris]
Length = 241
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/77 (66%), Positives = 58/77 (75%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK+VT+D L KFFSEKG VLSAKVSRVP SE+DVEAAI+
Sbjct: 165 HKVYVGNLAKTVTTDTLKKFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEDDVEAAIS 224
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN+ LEGQK+RVN+A
Sbjct: 225 SFNNSSLEGQKVRVNKA 241
>ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
gi|297736206|emb|CBI24844.3| unnamed protein product
[Vitis vinifera]
Length = 247
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGN-VLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAI 215
HKVYVGNLA++VT+D LT+FFSEKG VLSAKVSRVP SEEDVEAAI
Sbjct: 170 HKVYVGNLARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAI 229
Query: 214 ASCNNAVLEGQKIRVNRA 161
+SCNNA L+GQ+IRVN+A
Sbjct: 230 SSCNNAFLDGQRIRVNKA 247
>ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein
[Medicago truncatula]
Length = 235
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+VTSD L KFFSEKGN LSAKVSR P S+EDVEAAI+
Sbjct: 159 YKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAIS 218
Query: 211 SCNNAVLEGQKIRVNRA 161
S NNA+LEGQKIRVN+A
Sbjct: 219 SFNNALLEGQKIRVNKA 235
>ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X2
[Glycine max]
Length = 302
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/77 (66%), Positives = 57/77 (74%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK+VT+D L FFSEKG VLSAKVSRVP SEEDVEAAI+
Sbjct: 226 HKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAIS 285
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQ IRVN+A
Sbjct: 286 SFNNSLLEGQTIRVNKA 302
>gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/76 (67%), Positives = 57/76 (75%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+VTSD L KFFSEKGN LSAKVSR P S+EDVEAAI+
Sbjct: 159 YKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAIS 218
Query: 211 SCNNAVLEGQKIRVNR 164
S NNA+LEGQKIRVN+
Sbjct: 219 SFNNALLEGQKIRVNK 234
>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X1
[Glycine max]
Length = 246
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/77 (66%), Positives = 57/77 (74%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK+VT+D L FFSEKG VLSAKVSRVP SEEDVEAAI+
Sbjct: 170 HKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAIS 229
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQ IRVN+A
Sbjct: 230 SFNNSLLEGQTIRVNKA 246
>ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Glycine max]
Length = 246
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/77 (66%), Positives = 57/77 (74%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK+VT+D L FFSEKG VLSAKVSRVP SEEDVEAAI+
Sbjct: 170 HKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAIS 229
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQ IRVN+A
Sbjct: 230 SFNNSLLEGQTIRVNKA 246
>gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vulgaris]
Length = 246
Score = 93.6 bits (231), Expect = 2e-17
Identities = 50/77 (64%), Positives = 57/77 (74%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK+VT+D L KFF EKG VLSAKVSRVP SE+DVEAAI+
Sbjct: 170 HKVYVGNLAKTVTTDTLKKFFFEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEDDVEAAIS 229
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN+ LEGQK+RVN+A
Sbjct: 230 SFNNSSLEGQKVRVNKA 246
>gb|EOX96750.1| RNA-binding family protein [Theobroma cacao]
Length = 253
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/77 (62%), Positives = 59/77 (76%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK++T+D L KFFSEKG VLSAKVSRVP SEE+VEAAI+
Sbjct: 177 HKVYVGNLAKTITTDTLKKFFSEKGKVLSAKVSRVPGTSKSGGFGFVTFSSEEEVEAAIS 236
Query: 211 SCNNAVLEGQKIRVNRA 161
+ NN++LEGQ++RVN+A
Sbjct: 237 AFNNSLLEGQQVRVNKA 253
>ref|XP_006854941.1| hypothetical protein AMTR_s00052p00146290 [Amborella trichopoda]
gi|548858666|gb|ERN16408.1| hypothetical protein
AMTR_s00052p00146290 [Amborella trichopoda]
Length = 115
Score = 92.4 bits (228), Expect = 5e-17
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK+VT+D+L+KFFSEKG VLSAKV RVP EEDVEAAI+
Sbjct: 37 HKVYVGNLAKTVTTDMLSKFFSEKGKVLSAKVRRVPGTSKSSGFGFVSFSLEEDVEAAIS 96
Query: 211 SCNNAVLEGQKIRVNR 164
S NNA+LEG++IRV +
Sbjct: 97 SFNNALLEGRRIRVTK 112
>ref|XP_006291723.1| hypothetical protein CARUB_v10017892mg [Capsella rubella]
gi|482560430|gb|EOA24621.1| hypothetical protein
CARUB_v10017892mg [Capsella rubella]
Length = 254
Score = 91.3 bits (225), Expect = 1e-16
Identities = 49/77 (63%), Positives = 57/77 (74%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAKSVT ++L FFSEKG V+SAKVSRVP SEEDVEAAI
Sbjct: 178 YKVYVGNLAKSVTKEMLENFFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIL 237
Query: 211 SCNNAVLEGQKIRVNRA 161
+ NN++LEGQKIRVN+A
Sbjct: 238 ALNNSLLEGQKIRVNKA 254
>ref|XP_004306507.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 242
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/77 (63%), Positives = 54/77 (70%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNLAK VT++ L K FSEK VLSAKVSRVP SEEDVEAAI+
Sbjct: 166 HKVYVGNLAKGVTTETLQKLFSEKAKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAIS 225
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN + EGQKIRVN+A
Sbjct: 226 SFNNTLFEGQKIRVNKA 242
>ref|XP_006439065.1| hypothetical protein CICLE_v10032498mg [Citrus clementina]
gi|557541261|gb|ESR52305.1| hypothetical protein
CICLE_v10032498mg [Citrus clementina]
Length = 258
Score = 89.7 bits (221), Expect = 4e-16
Identities = 48/77 (62%), Positives = 58/77 (75%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+VTS++L K FSEKG VL+AKVSRVP SEED EAAI+
Sbjct: 182 YKVYVGNLAKTVTSEMLKKCFSEKGQVLNAKVSRVPGTSKSSGFGFVTFSSEEDAEAAIS 241
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQ+IRVN+A
Sbjct: 242 SLNNSLLEGQRIRVNKA 258
>ref|XP_004515536.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cicer
arietinum]
Length = 250
Score = 89.4 bits (220), Expect = 5e-16
Identities = 49/77 (63%), Positives = 55/77 (71%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+VTSD L FSEKG L AKVSRVP S+EDVEAAI+
Sbjct: 174 YKVYVGNLAKTVTSDSLKNLFSEKGKALGAKVSRVPGTSKSSGFGFVTFSSDEDVEAAIS 233
Query: 211 SCNNAVLEGQKIRVNRA 161
S NNA+LEGQKIRVN+A
Sbjct: 234 SFNNALLEGQKIRVNKA 250
>ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Populus trichocarpa]
gi|222850427|gb|EEE87974.1| hypothetical protein
POPTR_0009s07030g [Populus trichocarpa]
Length = 255
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/77 (62%), Positives = 56/77 (72%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+V +D L FFS+KGNVLSAKVSRVP SEEDVE AI+
Sbjct: 179 YKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAIS 238
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQ IRVN+A
Sbjct: 239 SFNNSLLEGQPIRVNKA 255
>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/77 (62%), Positives = 56/77 (72%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+V +D L FFS+KGNVLSAKVSRVP SEEDVE AI+
Sbjct: 179 YKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAIS 238
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQ IRVN+A
Sbjct: 239 SFNNSLLEGQPIRVNKA 255
>gb|EMJ20051.1| hypothetical protein PRUPE_ppa010401mg [Prunus persica]
Length = 251
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/77 (62%), Positives = 53/77 (68%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
HKVYVGNL K VT+D L FSEKG VLSAKVSRVP SEEDVEAAI+
Sbjct: 175 HKVYVGNLGKEVTTDTLKTLFSEKGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAIS 234
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN + EGQ+IRVN+A
Sbjct: 235 SFNNTLFEGQRIRVNKA 251
>ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Citrus
sinensis]
Length = 258
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+VTS++L K FSEKG VLSAKV RVP SEED EAAI+
Sbjct: 182 YKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFSSEEDAEAAIS 241
Query: 211 SCNNAVLEGQKIRVNRA 161
S NN++LEGQ+IRVN+A
Sbjct: 242 SLNNSLLEGQRIRVNKA 258
>tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea mays]
Length = 244
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -1
Query: 391 HKVYVGNLAKSVTSDVLTKFFSEKGNVLSAKVSRVPXXXXXXXXXXXXXXSEEDVEAAIA 212
+KVYVGNLAK+VT++VL FFSEKGN+LSA VS +P SEE+VEAA+A
Sbjct: 168 YKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVA 227
Query: 211 SCNNAVLEGQKIRVNRA 161
+ NNA LEGQ IRVNRA
Sbjct: 228 TFNNAELEGQLIRVNRA 244