BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00012456
         (1733 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC20363.1| tRNA pseudouridine synthase B [Morus notabilis]        597   e-168
gb|EMJ18454.1| hypothetical protein PRUPE_ppa004003mg [Prunus pe...   584   e-164
ref|XP_004960544.1| PREDICTED: uncharacterized protein LOC101781...   580   e-163
ref|XP_004306381.1| PREDICTED: uncharacterized protein LOC101305...   578   e-162
gb|EOY02540.1| Pseudouridine synthase family protein isoform 1 [...   577   e-162
ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259...   575   e-161
emb|CBI34844.3| unnamed protein product [Vitis vinifera]              573   e-160
gb|AFW75017.1| pseudouridylate synthase/ transporter [Zea mays]       572   e-160
ref|NP_001150630.1| pseudouridylate synthase/ transporter [Zea m...   572   e-160
gb|EEC78373.1| hypothetical protein OsI_18143 [Oryza sativa Indi...   569   e-159
ref|NP_001054428.2| Os05g0108000 [Oryza sativa Japonica Group] g...   569   e-159
gb|AAK73131.1|AC079022_4 putative tRNA synthase [Oryza sativa]        569   e-159
ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793...   568   e-159
ref|XP_006470217.1| PREDICTED: uncharacterized protein LOC102611...   567   e-159
ref|XP_006446631.1| hypothetical protein CICLE_v10014883mg [Citr...   566   e-158
ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricin...   565   e-158
ref|XP_006289729.1| hypothetical protein CARUB_v10003297mg [Caps...   565   e-158
gb|EPS69260.1| hypothetical protein M569_05504, partial [Genlise...   564   e-158
gb|EOY02541.1| Pseudouridine synthase family protein isoform 2 [...   562   e-157
ref|XP_002873668.1| hypothetical protein ARALYDRAFT_488288 [Arab...   561   e-157

>gb|EXC20363.1| tRNA pseudouridine synthase B [Morus notabilis]
          Length = 529

 Score =  597 bits (1539), Expect = e-168
 Identities = 322/535 (60%), Positives = 363/535 (67%), Gaps = 14/535 (2%)
 Frame = -3

Query: 1626 IAFLSPKMATSKLWSTLFLSYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYR 1447
            I FL P +       T FLS     L      + P S    L   T T YPL Y++I +R
Sbjct: 13   IVFLRPTLPNVSTSRTHFLSLPLPNLK---LLKTPISSISSLSFCTNTRYPLQYDMILHR 69

Query: 1446 PVRGSTSRRRLPNAHDGSDQPPPASSDAA------EVLSDTAGSSSEAAMDXXXXXXXXX 1285
            P + S  RR    A   S +P   SS+          L D+  S  EAAMD         
Sbjct: 70   PTQSSLDRRPARLARSTSPEPENPSSELGLEGWVDRKLGDSE-SPPEAAMDKAKRKYYNK 128

Query: 1284 XXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRM 1105
               RMY             D +VEL PEV+DFPRLH REEELYFYD FAYPWEK+KHY+M
Sbjct: 129  RRRRMYGTDDSDEENRRNEDGFVELRPEVVDFPRLHKREEELYFYDTFAYPWEKEKHYKM 188

Query: 1104 VYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFF 925
            VYQLEKKYFP   LDKAF++P +     S                        ++ L+FF
Sbjct: 189  VYQLEKKYFPDQCLDKAFLEPGQ-----SGNVEEKNTKKKKKRSGDDGEEMGDDKRLVFF 243

Query: 924  EESVEKKDSLAIKS--------VTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAESY 769
            EE  EK++  A+K         VTEKKVEEFFKCL+KVP   N +            E Y
Sbjct: 244  EE--EKREREAVKDGGGGGGGVVTEKKVEEFFKCLKKVPNKDNAETG--------NEEPY 293

Query: 768  LVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLL 589
            L+ R TELPPRWD P+GTVVLV+KPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATGLL
Sbjct: 294  LLTRTTELPPRWDSPNGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLL 353

Query: 588  IVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKS 409
            IVC+GKATK VDRYQGM+KGYSGVFRLGEATSTWDADSPVIQREPWEHIKD+DI+KA  S
Sbjct: 354  IVCVGKATKSVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAAS 413

Query: 408  FLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRV 229
            F GEIWQVPPMFSAIKVGGE+MYEKAR+GE++ELSPRRISI+QFDIERSL DRQNL+FRV
Sbjct: 414  FCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRV 473

Query: 228  TCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGY 64
             CSKGTYIRSLCADLGKALGSC+HL ALRRDSIGEYS DDAW F+ELEE I+K Y
Sbjct: 474  ICSKGTYIRSLCADLGKALGSCSHLTALRRDSIGEYSADDAWEFKELEEAISKAY 528


>gb|EMJ18454.1| hypothetical protein PRUPE_ppa004003mg [Prunus persica]
          Length = 536

 Score =  584 bits (1506), Expect = e-164
 Identities = 311/516 (60%), Positives = 353/516 (68%), Gaps = 23/516 (4%)
 Frame = -3

Query: 1542 RLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGS---TSRRRLPNAHDGSDQPPPAS 1372
            R     P+  +    STT+TPYPL Y+LI  RP + S   T RR    +   SD  P + 
Sbjct: 29   RAVLSRPWPSSTMSFSTTSTPYPLQYDLIVNRPTQSSLDHTRRRPARLSKPDSDNSPDSE 88

Query: 1371 SDAAEVLSDTAGSSSE---------AAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXDE- 1222
            SD  E  +  +    E         A MD            RMY             +E 
Sbjct: 89   SDLPEKPASVSELGFENWLDEKLASAEMDKSKRKYYNKRRKRMYGTDSEEDERRREDEES 148

Query: 1221 YVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDP 1042
             VEL+PEV++F  LH REEELYFYD F YPWEKDKHY+MVYQLEKKYFP   LDKAF++P
Sbjct: 149  LVELKPEVVEFNTLHKREEELYFYDTFTYPWEKDKHYKMVYQLEKKYFPDQCLDKAFLEP 208

Query: 1041 MEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXE---RALIFFEESVEKKD-------SLA 892
             +  P A  +                          + L+FFEE  E+K+       S  
Sbjct: 209  GQSSPNAKGDSNNVKGKVKRKKKKDGDGGEVESNNSKGLVFFEEDEERKEKGERDLVSNG 268

Query: 891  IKSVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTV 712
             K VTEKKVE+FFKCL+KVP      G           E YL+ R TELPP+WDGP GTV
Sbjct: 269  SKDVTEKKVEDFFKCLKKVPNKDAEVG---------NGEPYLLTRTTELPPKWDGPYGTV 319

Query: 711  VLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVK 532
            VLV+KPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVC+GKATK+VD YQGM+K
Sbjct: 320  VLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDGYQGMIK 379

Query: 531  GYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGG 352
            GYSGVFRLGEATSTWDADSPVIQREPWEHIKD+DIKK   SF GEIWQVPPMFSAIKVGG
Sbjct: 380  GYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKKVAASFSGEIWQVPPMFSAIKVGG 439

Query: 351  ERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKAL 172
            E+MYEKAR+GE++ELSPRRISI+QFDIERSL DRQNL+FRVTCSKGTYIRSLCADLGKAL
Sbjct: 440  EKMYEKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKAL 499

Query: 171  GSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGY 64
            GSCAHL ALRRDSIGE+S D+AW+F+ELEE ITK Y
Sbjct: 500  GSCAHLTALRRDSIGEFSADNAWDFKELEEAITKTY 535


>ref|XP_004960544.1| PREDICTED: uncharacterized protein LOC101781695 isoform X1 [Setaria
            italica]
          Length = 495

 Score =  580 bits (1495), Expect = e-163
 Identities = 311/507 (61%), Positives = 346/507 (68%), Gaps = 24/507 (4%)
 Frame = -3

Query: 1509 RRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPNAHDGSDQPPPASSDAAEVLSDTAGSS 1330
            RR LS TATPYPLYY+LI +RP                  +PP +SSDA       +   
Sbjct: 28   RRFLSLTATPYPLYYDLIVHRPA---------------DPKPPRSSSDAGGDRQPQSAPD 72

Query: 1329 SEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFY 1150
             +                 +               E+VEL PEV+DFPRLH REE LYF+
Sbjct: 73   EQTLDRAKRRYLRKRRSRLLPDPDAGAKPSSSSSSEFVELRPEVVDFPRLHAREEALYFH 132

Query: 1149 DAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXXXXXXXX 970
            D FA PWEKDKHYRM+Y+LEKKYFP  SLD AFV P +  P + A+              
Sbjct: 133  DTFAMPWEKDKHYRMLYRLEKKYFPHQSLDNAFV-PADAGPTSDAD-------------- 177

Query: 969  XXXXXXXXERALIFFEES----------VEKKDSLAIKS-VTEKKVEEFFKCLRKVP--- 832
                     R L+FF++           V+KKD    K  V E+KVE+FF+ LRK P   
Sbjct: 178  ---------RGLVFFDDEKKEDDGEDRVVDKKDGDNDKGEVLERKVEDFFRSLRKGPGEA 228

Query: 831  ----------KAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVVLVDKPKGWT 682
                      +A  RQ     P   E+ + YLV R TELPPRWDGP GTVVL+DKPKGWT
Sbjct: 229  EAKAKRPAAARAEPRQVKREVPREEERPQPYLVTRTTELPPRWDGPGGTVVLIDKPKGWT 288

Query: 681  SFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKGYSGVFRLGE 502
            SFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVC+GKATKIVD YQGMVKGYSGVFRLGE
Sbjct: 289  SFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKIVDCYQGMVKGYSGVFRLGE 348

Query: 501  ATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGERMYEKARKG 322
            ATSTWDADSPVIQREPWEHIKD DI+KA  SF GEIWQVPPMFSAIKVGGE+MY+KAR+G
Sbjct: 349  ATSTWDADSPVIQREPWEHIKDGDIRKAAASFKGEIWQVPPMFSAIKVGGEKMYDKARRG 408

Query: 321  ETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALGSCAHLAALR 142
            ETVELSPRRISIYQFDIERSL DRQNL+FRVTCSKGTYIRSLCADLGKALGSCAHL ALR
Sbjct: 409  ETVELSPRRISIYQFDIERSLEDRQNLIFRVTCSKGTYIRSLCADLGKALGSCAHLTALR 468

Query: 141  RDSIGEYSVDDAWNFEELEEHITKGYL 61
            RDSIGEY V+DAWNF+ELEE I KGYL
Sbjct: 469  RDSIGEYKVNDAWNFDELEEQINKGYL 495


>ref|XP_004306381.1| PREDICTED: uncharacterized protein LOC101305973 [Fragaria vesca
            subsp. vesca]
          Length = 503

 Score =  578 bits (1490), Expect = e-162
 Identities = 302/495 (61%), Positives = 350/495 (70%), Gaps = 8/495 (1%)
 Frame = -3

Query: 1524 PFSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPNAHDGSDQPPPASSDAAEVLSD 1345
            P  P     STT+TP+PL Y+LI  RP + S  R     A+   +    + SD++    +
Sbjct: 40   PCRPNTPSFSTTSTPFPLQYDLIINRPTQSSLDRLPARAANPDKNNSSISDSDSSPEKPN 99

Query: 1344 TAGSS-------SEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXDE-YVELEPEVIDF 1189
              G         S+  M+            RMY             +E  VEL+PEV++F
Sbjct: 100  ELGFDNWLDQKLSDDPMEKSKRKYYNKRRKRMYGGDSEEEEEKRREEERLVELKPEVVEF 159

Query: 1188 PRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPVPPASAEE 1009
              LH REEELYFYD FAYPWEKDKHY+MVY+LEKKY+P   LDKAF++P E  PP   + 
Sbjct: 160  NTLHKREEELYFYDTFAYPWEKDKHYKMVYRLEKKYYPDQCLDKAFLEPGEKNPPNKKK- 218

Query: 1008 XXXXXXXXXXXXXXXXXXXXXERALIFFEESVEKKDSLAIKSVTEKKVEEFFKCLRKVPK 829
                                 ++ ++FFEE  + ++ +A K V EKKVEEFFKCL+K P 
Sbjct: 219  -----------------IEHDDKGMVFFEEG-KVREPVAAKDVKEKKVEEFFKCLKKGPS 260

Query: 828  AGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRL 649
                          E+ E YL+ R +ELPPRWDGP GTVVLV+KPKGWTSFTVCGKLRRL
Sbjct: 261  E-------------EEGEPYLLTRSSELPPRWDGPYGTVVLVNKPKGWTSFTVCGKLRRL 307

Query: 648  VKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPV 469
            VKV+KVGHAGTLDPMATGLLIVC+GKATK+VD YQGM KGYSGVFRLGEATSTWDADSPV
Sbjct: 308  VKVKKVGHAGTLDPMATGLLIVCVGKATKVVDSYQGMTKGYSGVFRLGEATSTWDADSPV 367

Query: 468  IQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRIS 289
            IQREPWEHIKD+DIKKA  SF GEIWQVPPMFSAIKVGGE+MYEKAR+GE++ELSPRRIS
Sbjct: 368  IQREPWEHIKDEDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRIS 427

Query: 288  IYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDD 109
            IYQFDIERSL DRQNL+FRVTCSKGTYIRSLCADLGKALGSCAHL ALRRDSIGEYS D+
Sbjct: 428  IYQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKALGSCAHLTALRRDSIGEYSADN 487

Query: 108  AWNFEELEEHITKGY 64
            AW+F+ELE+ ITK Y
Sbjct: 488  AWDFKELEDAITKTY 502


>gb|EOY02540.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 526

 Score =  577 bits (1486), Expect = e-162
 Identities = 311/526 (59%), Positives = 363/526 (69%), Gaps = 6/526 (1%)
 Frame = -3

Query: 1626 IAFLSPKMAT--SKLWSTLFLSYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIR 1453
            + FL PK+ +  +   S   LS  +  LN +L    P S      STT+TPYPL Y++I 
Sbjct: 3    LLFLRPKLVSFFTATQSLRLLSSKSNNLNKKLIFSKPLSSI--FFSTTSTPYPLQYDMII 60

Query: 1452 YRPVRG--STSRRRL--PNAHDGSDQPPPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXX 1285
              P +   + +RRRL  P++ + +++  P      +   +   +  +  MD         
Sbjct: 61   NAPTKSQPTPTRRRLSRPDSPNSAEEENPEKELGFDSWVEKKLTLDDE-MDKSKRKYYRK 119

Query: 1284 XXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRM 1105
               RMY             D +VEL+P+V++F RLH REEELYFYD FAYPWEKDKHY+M
Sbjct: 120  RRKRMYGSDSEDDEKGKNEDGFVELKPKVVEFDRLHEREEELYFYDTFAYPWEKDKHYKM 179

Query: 1104 VYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFF 925
            VYQLEKKYFP     KAF++P +     S E+                      + L+FF
Sbjct: 180  VYQLEKKYFPDQCFGKAFLEPGK-----SNEKNKDKGKSKKPGDDKEVED----KGLVFF 230

Query: 924  EESVEKKDSLAIKSVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAESYLVNRKTEL 745
            EE       +  K VTEKKVEEFFKCL+KVP              V   E YLV+R TEL
Sbjct: 231  EEEGNSGKDVK-KEVTEKKVEEFFKCLKKVPYNDTE---------VSAGEPYLVSRNTEL 280

Query: 744  PPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKAT 565
            PPRWDG  GTVVLV+KPKGWTSFTVCGKLRRL+KV+KVGHAGTLDPMATGLLIVC+GKAT
Sbjct: 281  PPRWDGQYGTVVLVNKPKGWTSFTVCGKLRRLIKVKKVGHAGTLDPMATGLLIVCVGKAT 340

Query: 564  KIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQV 385
            K VDRYQGM+KGYSGVFRLGEATSTWDADSPVIQREPWEHIKD+DIKK   SFLGEIWQV
Sbjct: 341  KFVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKKTAASFLGEIWQV 400

Query: 384  PPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYI 205
            PPMFSAIKVGGE+MY+KAR+GE++ELSPRRISI+ FDIERSL +RQNL+FRVTCSKGTYI
Sbjct: 401  PPMFSAIKVGGEKMYDKARRGESIELSPRRISIFHFDIERSLEERQNLIFRVTCSKGTYI 460

Query: 204  RSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKG 67
            RSLCADLGKALGSCAHL ALRRDSIGEYS DDAW F+ELEE ITKG
Sbjct: 461  RSLCADLGKALGSCAHLTALRRDSIGEYSADDAWEFKELEEAITKG 506


>ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259460 [Vitis vinifera]
          Length = 520

 Score =  575 bits (1481), Expect = e-161
 Identities = 307/515 (59%), Positives = 359/515 (69%), Gaps = 9/515 (1%)
 Frame = -3

Query: 1581 TLFLSYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRR----- 1417
            TL L +    L  RL  R    P   L STT+TP+PL Y++I  RP +    R R     
Sbjct: 20   TLSLFFKPPSL--RLLTRPSSFP--HLFSTTSTPHPLQYDMIISRPAQPPPPRPRRRLTP 75

Query: 1416 LPNA--HDGSDQPPPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXX 1243
            LPN+  +D  D   P S      +      S +  MD            RMY        
Sbjct: 76   LPNSKPNDSPDAESPDSEGFENWVDRKLSGSDDLQMDKAKRKYYNKRRKRMYGSDSDEDG 135

Query: 1242 XXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSL 1063
                  +YVEL+ EV++   LH +EEELYFYDAFAYPWEK+KHY+MVYQLEKKYFP + L
Sbjct: 136  GAAQE-KYVELKQEVVELRTLHKKEEELYFYDAFAYPWEKEKHYKMVYQLEKKYFPDHCL 194

Query: 1062 DKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFFEESVEKKDSLAIKS 883
            DKAF++P E    A+  +                      + L+FFE   ++K S++ K 
Sbjct: 195  DKAFLEPGETNESANNAKAKKKVGKGGEKREEIGDGGDD-KGLVFFEGEKDEKVSVSAKE 253

Query: 882  --VTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVV 709
              ++EKKVEEFFKCL+KVP            +  ++ E Y V R +ELPPRWDGPSGTVV
Sbjct: 254  KELSEKKVEEFFKCLKKVPNKD---------VEGDRGEPYFVTRSSELPPRWDGPSGTVV 304

Query: 708  LVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKG 529
            L++KPKGWTSFTVCGKLRRLV+V+KVGHAGTLDPMATGLLIVC+GKATK+V+ YQGMVKG
Sbjct: 305  LINKPKGWTSFTVCGKLRRLVQVKKVGHAGTLDPMATGLLIVCVGKATKLVESYQGMVKG 364

Query: 528  YSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGE 349
            YSG+FRLGEATSTWDADSPVIQREPWEHIKD++IKK   SF GEIWQVPPMFSAIKVGGE
Sbjct: 365  YSGIFRLGEATSTWDADSPVIQREPWEHIKDENIKKTAASFCGEIWQVPPMFSAIKVGGE 424

Query: 348  RMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALG 169
            +MYEKAR+GE+VELSPRRISI++FDIERSL DRQNLVFRVTCSKGTYIRSLCAD GKALG
Sbjct: 425  KMYEKARRGESVELSPRRISIFKFDIERSLDDRQNLVFRVTCSKGTYIRSLCADFGKALG 484

Query: 168  SCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGY 64
            SCAHLAALRRDSIG YS DDAW F++LEE ITKGY
Sbjct: 485  SCAHLAALRRDSIGPYSADDAWEFKDLEEAITKGY 519


>emb|CBI34844.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  573 bits (1476), Expect = e-160
 Identities = 306/515 (59%), Positives = 358/515 (69%), Gaps = 9/515 (1%)
 Frame = -3

Query: 1581 TLFLSYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRR----- 1417
            TL L +    L  RL  R    P   L STT+TP+PL Y++I  RP +    R R     
Sbjct: 20   TLSLFFKPPSL--RLLTRPSSFP--HLFSTTSTPHPLQYDMIISRPAQPPPPRPRRRLTP 75

Query: 1416 LPNA--HDGSDQPPPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXX 1243
            LPN+  +D  D   P S      +      S +  MD            RMY        
Sbjct: 76   LPNSKPNDSPDAESPDSEGFENWVDRKLSGSDDLQMDKAKRKYYNKRRKRMYGSDSDEDG 135

Query: 1242 XXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSL 1063
                  +YVEL+ EV++   LH +EEELYFYDAFAYPWEK+KHY+MVYQLEKKYFP + L
Sbjct: 136  GAAQE-KYVELKQEVVELRTLHKKEEELYFYDAFAYPWEKEKHYKMVYQLEKKYFPDHCL 194

Query: 1062 DKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFFEESVEKKDSLAIKS 883
            DKAF++P E       +                      ++ L+FFE   ++K S++ K 
Sbjct: 195  DKAFLEPGETNEKEIGD-------------------GGDDKGLVFFEGEKDEKVSVSAKE 235

Query: 882  --VTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVV 709
              ++EKKVEEFFKCL+KVP            +  ++ E Y V R +ELPPRWDGPSGTVV
Sbjct: 236  KELSEKKVEEFFKCLKKVPNKD---------VEGDRGEPYFVTRSSELPPRWDGPSGTVV 286

Query: 708  LVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKG 529
            L++KPKGWTSFTVCGKLRRLV+V+KVGHAGTLDPMATGLLIVC+GKATK+V+ YQGMVKG
Sbjct: 287  LINKPKGWTSFTVCGKLRRLVQVKKVGHAGTLDPMATGLLIVCVGKATKLVESYQGMVKG 346

Query: 528  YSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGE 349
            YSG+FRLGEATSTWDADSPVIQREPWEHIKD++IKK   SF GEIWQVPPMFSAIKVGGE
Sbjct: 347  YSGIFRLGEATSTWDADSPVIQREPWEHIKDENIKKTAASFCGEIWQVPPMFSAIKVGGE 406

Query: 348  RMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALG 169
            +MYEKAR+GE+VELSPRRISI++FDIERSL DRQNLVFRVTCSKGTYIRSLCAD GKALG
Sbjct: 407  KMYEKARRGESVELSPRRISIFKFDIERSLDDRQNLVFRVTCSKGTYIRSLCADFGKALG 466

Query: 168  SCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGY 64
            SCAHLAALRRDSIG YS DDAW F++LEE ITKGY
Sbjct: 467  SCAHLAALRRDSIGPYSADDAWEFKDLEEAITKGY 501


>gb|AFW75017.1| pseudouridylate synthase/ transporter [Zea mays]
          Length = 497

 Score =  572 bits (1475), Expect = e-160
 Identities = 314/535 (58%), Positives = 357/535 (66%), Gaps = 31/535 (5%)
 Frame = -3

Query: 1572 LSYSAAKLNPRLFARNP-----FSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPN 1408
            ++ +AA+    L   +P     F   RR LS TAT YPLYY+LI +RP            
Sbjct: 8    MAAAAARARAALLPSSPSPSPLFRLPRRFLSLTATRYPLYYDLIVHRPA----------- 56

Query: 1407 AHDGSDQPPPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXX 1228
                   P P  S AA        +  E  +D            R+              
Sbjct: 57   ------DPNPPKSSAAGADRQPQPAPEEQTLDRAKRRYLRKRRSRLLPDPDATTTTKPSS 110

Query: 1227 D--EYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKA 1054
               E+VEL PEV+DFPRLH REE LYF+D FA PWEKDKHYRM+Y+LEKKYFP  SLD A
Sbjct: 111  LSSEFVELRPEVVDFPRLHAREEALYFHDTFAMPWEKDKHYRMLYRLEKKYFPHQSLDNA 170

Query: 1053 FVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFFEESVEKKDSLAIK---- 886
            FV   +  P + A+                       R L+FF++  EKK++   +    
Sbjct: 171  FVSA-DAAPASDAD-----------------------RGLVFFDD--EKKENEGEERAVS 204

Query: 885  -------SVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITV-------------EQAESYL 766
                    V E+KVE+FF+ L+K P  G        P T              E+ + YL
Sbjct: 205  DKGANKGEVLERKVEDFFRSLKKGP--GQVDTKAKRPGTEPQQQVKREVRREEERPQPYL 262

Query: 765  VNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLI 586
            V R TELPPRWDGP+GTVVL+DKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLI
Sbjct: 263  VTRTTELPPRWDGPAGTVVLIDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLI 322

Query: 585  VCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSF 406
            VC+GKATKIVD YQGMVKGYSGVFRLGEATSTWDADSP+IQREPWEHIKD++I+KA  SF
Sbjct: 323  VCVGKATKIVDSYQGMVKGYSGVFRLGEATSTWDADSPIIQREPWEHIKDENIRKAAASF 382

Query: 405  LGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVT 226
            +GEIWQVPPMFSAIKVGGE+MY+KARKGETVELSPRRISIYQFDIERSL DRQNL+FRVT
Sbjct: 383  MGEIWQVPPMFSAIKVGGEKMYDKARKGETVELSPRRISIYQFDIERSLEDRQNLIFRVT 442

Query: 225  CSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGYL 61
            CSKGTYIRSLCADLGKALGSCAHL ALRRDSIGEYSV+DAWNF+ELEE ITKGYL
Sbjct: 443  CSKGTYIRSLCADLGKALGSCAHLTALRRDSIGEYSVNDAWNFDELEEQITKGYL 497


>ref|NP_001150630.1| pseudouridylate synthase/ transporter [Zea mays]
            gi|195640714|gb|ACG39825.1| pseudouridylate synthase/
            transporter [Zea mays]
          Length = 490

 Score =  572 bits (1475), Expect = e-160
 Identities = 314/535 (58%), Positives = 357/535 (66%), Gaps = 31/535 (5%)
 Frame = -3

Query: 1572 LSYSAAKLNPRLFARNP-----FSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPN 1408
            ++ +AA+    L   +P     F   RR LS TAT YPLYY+LI +RP            
Sbjct: 1    MAAAAARARAALLPSSPSPSPLFRLPRRFLSLTATRYPLYYDLIVHRPA----------- 49

Query: 1407 AHDGSDQPPPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXX 1228
                   P P  S AA        +  E  +D            R+              
Sbjct: 50   ------DPNPPKSSAAGADRQPQPAPEEQTLDRAKRRYLRKRRSRLLPDPDATTTTKPSS 103

Query: 1227 D--EYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKA 1054
               E+VEL PEV+DFPRLH REE LYF+D FA PWEKDKHYRM+Y+LEKKYFP  SLD A
Sbjct: 104  LSSEFVELRPEVVDFPRLHAREEALYFHDTFAMPWEKDKHYRMLYRLEKKYFPHQSLDNA 163

Query: 1053 FVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFFEESVEKKDSLAIK---- 886
            FV   +  P + A+                       R L+FF++  EKK++   +    
Sbjct: 164  FVSA-DAAPASDAD-----------------------RGLVFFDD--EKKENEGEERAVS 197

Query: 885  -------SVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITV-------------EQAESYL 766
                    V E+KVE+FF+ L+K P  G        P T              E+ + YL
Sbjct: 198  DKGANKGEVLERKVEDFFRSLKKGP--GQVDTKAKRPGTEPQQQVKREVRREEERPQPYL 255

Query: 765  VNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLI 586
            V R TELPPRWDGP+GTVVL+DKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLI
Sbjct: 256  VTRTTELPPRWDGPAGTVVLIDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLI 315

Query: 585  VCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSF 406
            VC+GKATKIVD YQGMVKGYSGVFRLGEATSTWDADSP+IQREPWEHIKD++I+KA  SF
Sbjct: 316  VCVGKATKIVDSYQGMVKGYSGVFRLGEATSTWDADSPIIQREPWEHIKDENIRKAAASF 375

Query: 405  LGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVT 226
            +GEIWQVPPMFSAIKVGGE+MY+KARKGETVELSPRRISIYQFDIERSL DRQNL+FRVT
Sbjct: 376  MGEIWQVPPMFSAIKVGGEKMYDKARKGETVELSPRRISIYQFDIERSLEDRQNLIFRVT 435

Query: 225  CSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGYL 61
            CSKGTYIRSLCADLGKALGSCAHL ALRRDSIGEYSV+DAWNF+ELEE ITKGYL
Sbjct: 436  CSKGTYIRSLCADLGKALGSCAHLTALRRDSIGEYSVNDAWNFDELEEQITKGYL 490


>gb|EEC78373.1| hypothetical protein OsI_18143 [Oryza sativa Indica Group]
          Length = 488

 Score =  569 bits (1467), Expect = e-159
 Identities = 307/519 (59%), Positives = 356/519 (68%), Gaps = 18/519 (3%)
 Frame = -3

Query: 1563 SAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPNAHDGSDQP 1384
            +AA+L     +  P    RR LS TATPYPLYY+L+ YRP                   P
Sbjct: 12   AAAQLLSSSSSPPPLRLPRRFLSLTATPYPLYYDLLLYRP-----------------SYP 54

Query: 1383 PPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXD--EYVEL 1210
             P  S AA+   D     ++  +D            R+                 E+VEL
Sbjct: 55   NPPKSSAAD---DRHTRPTDDHLDRAKRRYLRKRRSRLLPDPDATTAKPSSSSSSEFVEL 111

Query: 1209 EPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPV 1030
            +PEV+DFPRLH REE LYF+DAFA PWEKDKHYRM+Y+LEKKYFP  SLD AFV P +  
Sbjct: 112  KPEVVDFPRLHAREEALYFHDAFALPWEKDKHYRMLYRLEKKYFPDQSLDNAFV-PADAS 170

Query: 1029 PPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFFE--------ESVEKKDSLAIKSVTE 874
            PP+S                        ++ L+FF+        E  +KKD      V E
Sbjct: 171  PPSS---------------------DAADKGLVFFDDDGNNKEAEVKKKKDGEDRGEVLE 209

Query: 873  KKVEEFFKCLRKVP--------KAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSG 718
            +KVE+FF+ L+K P        KA  ++         E  + +L +R+TELPPRW+GP+G
Sbjct: 210  RKVEDFFRSLKKGPGHGEANVMKAKKKEPPQVRHEADEWPQPHLASRRTELPPRWNGPTG 269

Query: 717  TVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGM 538
            TVVL+DKPKGWTSFTVCGKLRRLV VQKVGHAGTLDPMATGLLIVC+GKATK+VDRYQGM
Sbjct: 270  TVVLIDKPKGWTSFTVCGKLRRLVNVQKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGM 329

Query: 537  VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKV 358
            VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKD+DI+K   SF GEIWQVPPMFSAIKV
Sbjct: 330  VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKVAASFRGEIWQVPPMFSAIKV 389

Query: 357  GGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGK 178
            GGE+MY+KAR+GETVELSPRRISI+QFDIERSL DRQNL+FRV CSKGTYIRSLCADLGK
Sbjct: 390  GGEKMYDKARRGETVELSPRRISIHQFDIERSLEDRQNLIFRVICSKGTYIRSLCADLGK 449

Query: 177  ALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGYL 61
            ALGSCAHL ALRRDSIG++SV+DAW+F ELEE ITKGYL
Sbjct: 450  ALGSCAHLTALRRDSIGDFSVNDAWSFAELEEQITKGYL 488


>ref|NP_001054428.2| Os05g0108000 [Oryza sativa Japonica Group] gi|52353567|gb|AAU44133.1|
            putative tRNA synthase [Oryza sativa Japonica Group]
            gi|255675942|dbj|BAF16342.2| Os05g0108000 [Oryza sativa
            Japonica Group]
          Length = 488

 Score =  569 bits (1467), Expect = e-159
 Identities = 307/519 (59%), Positives = 356/519 (68%), Gaps = 18/519 (3%)
 Frame = -3

Query: 1563 SAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPNAHDGSDQP 1384
            +AA+L     +  P    RR LS TATPYPLYY+L+ YRP                   P
Sbjct: 12   AAAQLLSSSSSPPPLRLPRRFLSLTATPYPLYYDLLLYRP-----------------SYP 54

Query: 1383 PPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXD--EYVEL 1210
             P  S AA+   D     ++  +D            R+                 E+VEL
Sbjct: 55   NPPKSSAAD---DRHTRPTDDHLDRAKRRYLRKRRSRLLPDPDATTAKPSSSSSSEFVEL 111

Query: 1209 EPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPV 1030
            +PEV+DFPRLH REE LYF+DAFA PWEKDKHYRM+Y+LEKKYFP  SLD AFV P +  
Sbjct: 112  KPEVVDFPRLHAREEALYFHDAFALPWEKDKHYRMLYRLEKKYFPDQSLDNAFV-PADAS 170

Query: 1029 PPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFFE--------ESVEKKDSLAIKSVTE 874
            PP+S                        ++ L+FF+        E  +KKD      V E
Sbjct: 171  PPSS---------------------DAADKGLVFFDDDDNNKEAEVKKKKDGEDRGEVLE 209

Query: 873  KKVEEFFKCLRKVP--------KAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSG 718
            +KVE+FF+ L+K P        KA  ++         E  + +L +R+TELPPRW+GP+G
Sbjct: 210  RKVEDFFRSLKKGPGHGEANVMKAKKKEPPQVRHEADEWPQPHLASRRTELPPRWNGPTG 269

Query: 717  TVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGM 538
            TVVL+DKPKGWTSFTVCGKLRRLV VQKVGHAGTLDPMATGLLIVC+GKATK+VDRYQGM
Sbjct: 270  TVVLIDKPKGWTSFTVCGKLRRLVNVQKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGM 329

Query: 537  VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKV 358
            VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKD+DI+K   SF GEIWQVPPMFSAIKV
Sbjct: 330  VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKVAASFRGEIWQVPPMFSAIKV 389

Query: 357  GGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGK 178
            GGE+MY+KAR+GETVELSPRRISI+QFDIERSL DRQNL+FRV CSKGTYIRSLCADLGK
Sbjct: 390  GGEKMYDKARRGETVELSPRRISIHQFDIERSLEDRQNLIFRVICSKGTYIRSLCADLGK 449

Query: 177  ALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGYL 61
            ALGSCAHL ALRRDSIG++SV+DAW+F ELEE ITKGYL
Sbjct: 450  ALGSCAHLTALRRDSIGDFSVNDAWSFAELEEQITKGYL 488


>gb|AAK73131.1|AC079022_4 putative tRNA synthase [Oryza sativa]
          Length = 525

 Score =  569 bits (1467), Expect = e-159
 Identities = 307/519 (59%), Positives = 356/519 (68%), Gaps = 18/519 (3%)
 Frame = -3

Query: 1563 SAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPNAHDGSDQP 1384
            +AA+L     +  P    RR LS TATPYPLYY+L+ YRP                   P
Sbjct: 49   AAAQLLSSSSSPPPLRLPRRFLSLTATPYPLYYDLLLYRP-----------------SYP 91

Query: 1383 PPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXD--EYVEL 1210
             P  S AA+   D     ++  +D            R+                 E+VEL
Sbjct: 92   NPPKSSAAD---DRHTRPTDDHLDRAKRRYLRKRRSRLLPDPDATTAKPSSSSSSEFVEL 148

Query: 1209 EPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPV 1030
            +PEV+DFPRLH REE LYF+DAFA PWEKDKHYRM+Y+LEKKYFP  SLD AFV P +  
Sbjct: 149  KPEVVDFPRLHAREEALYFHDAFALPWEKDKHYRMLYRLEKKYFPDQSLDNAFV-PADAS 207

Query: 1029 PPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFFE--------ESVEKKDSLAIKSVTE 874
            PP+S                        ++ L+FF+        E  +KKD      V E
Sbjct: 208  PPSS---------------------DAADKGLVFFDDDDNNKEAEVKKKKDGEDRGEVLE 246

Query: 873  KKVEEFFKCLRKVP--------KAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSG 718
            +KVE+FF+ L+K P        KA  ++         E  + +L +R+TELPPRW+GP+G
Sbjct: 247  RKVEDFFRSLKKGPGHGEANVMKAKKKEPPQVRHEADEWPQPHLASRRTELPPRWNGPTG 306

Query: 717  TVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGM 538
            TVVL+DKPKGWTSFTVCGKLRRLV VQKVGHAGTLDPMATGLLIVC+GKATK+VDRYQGM
Sbjct: 307  TVVLIDKPKGWTSFTVCGKLRRLVNVQKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGM 366

Query: 537  VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKV 358
            VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKD+DI+K   SF GEIWQVPPMFSAIKV
Sbjct: 367  VKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKVAASFRGEIWQVPPMFSAIKV 426

Query: 357  GGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGK 178
            GGE+MY+KAR+GETVELSPRRISI+QFDIERSL DRQNL+FRV CSKGTYIRSLCADLGK
Sbjct: 427  GGEKMYDKARRGETVELSPRRISIHQFDIERSLEDRQNLIFRVICSKGTYIRSLCADLGK 486

Query: 177  ALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGYL 61
            ALGSCAHL ALRRDSIG++SV+DAW+F ELEE ITKGYL
Sbjct: 487  ALGSCAHLTALRRDSIGDFSVNDAWSFAELEEQITKGYL 525


>ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793939 isoform X1 [Glycine
            max]
          Length = 485

 Score =  568 bits (1463), Expect = e-159
 Identities = 305/498 (61%), Positives = 347/498 (69%), Gaps = 4/498 (0%)
 Frame = -3

Query: 1542 RLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPNAHDGSDQPPPASSDA 1363
            RL +  PF P  RLLSTT TPYPL YELI  RP            ++  S +PPPA    
Sbjct: 28   RLSSSFPFPPRPRLLSTTPTPYPLQYELIINRP------------SYPDSPRPPPARPI- 74

Query: 1362 AEVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPR 1183
                      S E  ++            RMY               +VEL+PEV+DFP 
Sbjct: 75   ---------DSPEPELNKAQRKYYNKRRKRMYGSDEDESRRPDET--FVELKPEVVDFPT 123

Query: 1182 LHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXX 1003
            LH REEELYFYDAF YPWEKDKHY+MVYQLEKKYFP   LDKAF+ P +    A+ +   
Sbjct: 124  LHKREEELYFYDAFTYPWEKDKHYKMVYQLEKKYFPDQCLDKAFLQPGQSNANANGK--- 180

Query: 1002 XXXXXXXXXXXXXXXXXXXERALIFFEE-SVEKK---DSLAIKSVTEKKVEEFFKCLRKV 835
                               E  L+FFEE +VE+K        + + EKKVE+FFK L+K 
Sbjct: 181  ------GKGRKKVVGGGGGEEKLVFFEEGNVEEKGEESGSGSRQLKEKKVEDFFKGLKKD 234

Query: 834  PKAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLR 655
            P     +        V+  E +L +R+T LPP WD P GTV+LV+KPKGWTSFTVCGKLR
Sbjct: 235  PSPSLNKD-------VQVGEPFLSSRRTGLPPVWDTPHGTVLLVNKPKGWTSFTVCGKLR 287

Query: 654  RLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADS 475
            RLVKV+KVGHAGTLDPMATGLLIVC+GKATK+VDRYQGM+KGYSGVFRLGEATSTWDADS
Sbjct: 288  RLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADS 347

Query: 474  PVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRR 295
            PVIQREPWEHIKD+DIK+   SF GEIWQVPPMFSAIKVGGE+MYEKAR+GE++ELSPRR
Sbjct: 348  PVIQREPWEHIKDEDIKRNALSFSGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRR 407

Query: 294  ISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSV 115
            ISI+QFDIERSL DRQNL+FRVTCSKGTYIRSLCAD GKALGSCAHL ALRRDSIG+YS 
Sbjct: 408  ISIFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSA 467

Query: 114  DDAWNFEELEEHITKGYL 61
            DDAW F+ELEE ITK YL
Sbjct: 468  DDAWEFQELEEAITKNYL 485


>ref|XP_006470217.1| PREDICTED: uncharacterized protein LOC102611441 [Citrus sinensis]
          Length = 528

 Score =  567 bits (1462), Expect = e-159
 Identities = 310/546 (56%), Positives = 362/546 (66%), Gaps = 25/546 (4%)
 Frame = -3

Query: 1626 IAFLSPKMATSKLWSTLFL----SYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYEL 1459
            +  L PK+ TS    +L L      +  K N  L +   FS      S T+TPYPL Y++
Sbjct: 3    LLLLRPKLITSSRTLSLLLPPPLKDNFIKKNVYLLSTKAFSS-----SITSTPYPLQYDM 57

Query: 1458 IRYRPVRGSTSRRRLPNAHDGSDQPPPASSDAAEVLSDT-------------AGSSSEAA 1318
            I   P +   S+ R   A   S       +   E+  D+                S  A 
Sbjct: 58   IINNPTQPQQSQTRRRPARVNSTNSDENQNPDGELGFDSWVDKKLEKEAKTRQPGSDNAE 117

Query: 1317 MDXXXXXXXXXXXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFA 1138
            M             RMY               +VEL+PEV++F RLH REEELYFYD FA
Sbjct: 118  MTKSMRKYYNKRRQRMYGTDSEDEYGKNDGG-FVELKPEVVEFNRLHKREEELYFYDTFA 176

Query: 1137 YPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXX 958
            YPWEKDKHY+MVYQLEKKYFP   LDKAF+D       ++ +                  
Sbjct: 177  YPWEKDKHYKMVYQLEKKYFPDQCLDKAFLD------RSADQNVKKMRKKAGGKSEEKKD 230

Query: 957  XXXXERALIFFEESVEK--KDSLAIK------SVTEKKVEEFFKCLRKVPKAGNRQGAVA 802
                ++ L+FF++  +K  KDS+  +       V+EKKVEEFFKCL+KVP   N  G+  
Sbjct: 231  NKEDDKRLVFFDDQEKKSEKDSILGEDVNVKGEVSEKKVEEFFKCLKKVPNKENEVGS-- 288

Query: 801  APITVEQAESYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHA 622
                    E Y+V+R TELPP WDGP GT+VLV+KPKGWTSFTVCGKLRRLVKV+KVGHA
Sbjct: 289  -------GEPYIVSRSTELPPTWDGPFGTMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHA 341

Query: 621  GTLDPMATGLLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHI 442
            GTLDPMATGLLIVC+GKATK+VDRYQGM+KGYSGVFRLGEATSTWDADSPVIQREPWEHI
Sbjct: 342  GTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHI 401

Query: 441  KDDDIKKAVKSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERS 262
            KD+DI+KA  SF GEIWQVPPMFSAIKVGGE+MY+KAR+GE++ELSPRRISI+QFDIERS
Sbjct: 402  KDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDIERS 461

Query: 261  LGDRQNLVFRVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEE 82
            L DRQNL+FRVTCSKGTYIRSLCAD GKALGSCAHL ALRRDSIG+YS DDAW F+ELEE
Sbjct: 462  LEDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDAWEFKELEE 521

Query: 81   HITKGY 64
             ITK Y
Sbjct: 522  AITKNY 527


>ref|XP_006446631.1| hypothetical protein CICLE_v10014883mg [Citrus clementina]
            gi|557549242|gb|ESR59871.1| hypothetical protein
            CICLE_v10014883mg [Citrus clementina]
          Length = 528

 Score =  566 bits (1458), Expect = e-158
 Identities = 309/546 (56%), Positives = 361/546 (66%), Gaps = 25/546 (4%)
 Frame = -3

Query: 1626 IAFLSPKMATSKLWSTLFL----SYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYEL 1459
            +  L PK+ TS    +L L      +  K N  L +   FS      S T+TPYPL Y++
Sbjct: 3    LLLLRPKLITSSRTLSLLLPPPLKDNFIKKNVYLLSTKAFSS-----SITSTPYPLQYDM 57

Query: 1458 IRYRPVRGSTSRRRLPNAHDGSDQPPPASSDAAEVLSDT-------------AGSSSEAA 1318
            I   P +   S+ R   A   S       +   E+  D+                S  A 
Sbjct: 58   IINHPTQPQQSQTRRRPARVNSTNLDENQNPDGELGFDSWVDKKLEKEAKTRQPGSDNAE 117

Query: 1317 MDXXXXXXXXXXXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFA 1138
            M             RMY               +VEL+PEV++F RLH REEELYFYD FA
Sbjct: 118  MTKSMRKYYNKRRKRMYGTDSEDEYGKNDDG-FVELKPEVVEFNRLHKREEELYFYDTFA 176

Query: 1137 YPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXX 958
            YPWEKDKHY+MVYQLEKKYFP   LDKAF+DP      ++ +                  
Sbjct: 177  YPWEKDKHYKMVYQLEKKYFPDQCLDKAFLDP------SADQNVKKMRKKAGGKSEEKKY 230

Query: 957  XXXXERALIFFEESVEK--KDSLAIKSV------TEKKVEEFFKCLRKVPKAGNRQGAVA 802
                ++ L+FF++  +K  KDS+  + V      + KKVEEFFKCL+KVP   N  G+  
Sbjct: 231  NKEDDKRLVFFDDQEKKSEKDSILGEDVNVKGEVSAKKVEEFFKCLKKVPNKENEVGS-- 288

Query: 801  APITVEQAESYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHA 622
                    E Y+V+R TELPP WDGP G +VLV+KPKGWTSFTVCGKLRRLVKV+KVGHA
Sbjct: 289  -------GEPYIVSRSTELPPTWDGPFGAMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHA 341

Query: 621  GTLDPMATGLLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHI 442
            GTLDPMATGLLIVC+GKATK+VDRYQGM+KGYSGVFRLGEATSTWDADSPVIQREPWEHI
Sbjct: 342  GTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHI 401

Query: 441  KDDDIKKAVKSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERS 262
            KD+DI+KA  SF GEIWQVPPMFSAIKVGGE+MY+KAR+GE++ELSPRRISI+QFDIERS
Sbjct: 402  KDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDIERS 461

Query: 261  LGDRQNLVFRVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEE 82
            L DRQNL+FRVTCSKGTYIRSLCAD GKALGSCAHL ALRRDSIG+YS DDAW F+ELEE
Sbjct: 462  LEDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDAWEFKELEE 521

Query: 81   HITKGY 64
             ITK Y
Sbjct: 522  AITKNY 527


>ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricinus communis]
            gi|223539387|gb|EEF40978.1| tRNA-pseudouridine synthase,
            putative [Ricinus communis]
          Length = 513

 Score =  565 bits (1456), Expect = e-158
 Identities = 299/492 (60%), Positives = 341/492 (69%), Gaps = 7/492 (1%)
 Frame = -3

Query: 1518 SPARRLLSTTATPYPLYYELIRYRPVRGSTSRRRLPNAH---DGSDQPPPASSDAAEVLS 1348
            S +R L ST +TPYP  Y++I  RP +    + R   A    D SD  P   S+    L 
Sbjct: 36   SLSRTLFSTVSTPYPFQYDMIISRPSQSQPPQSRSQPARVTKDDSDCSPEPESE----LG 91

Query: 1347 DTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPRE 1168
              +    + +MD            RMY               +VEL+PEV  F  LH RE
Sbjct: 92   LDSWVDQKLSMDKSKRKYYNKRRKRMYGSDSDDDTRNKDEG-FVELKPEVAHFGSLHKRE 150

Query: 1167 EELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXX 988
            EELY YD FAYPWEKDKHY+MVYQLEKKYFP    DKAF+D  +    +  E        
Sbjct: 151  EELYMYDTFAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFLDHKDS-NFSKNESVKRSSKR 209

Query: 987  XXXXXXXXXXXXXXERALIFFEESVEKKDSLA----IKSVTEKKVEEFFKCLRKVPKAGN 820
                          ++ L+FFEE   + +S +     K VTE+KVEEFFKCL+KVP   N
Sbjct: 210  VVKRDTNGVGDREEDKGLVFFEEEKAEIESNSEKNVAKDVTERKVEEFFKCLKKVPNKKN 269

Query: 819  RQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKV 640
                      ++  E YLV R TELPPRWD   GTVVLV+KPKGWTSFTVCGKLRRLVKV
Sbjct: 270  E---------IDTGEPYLVTRSTELPPRWDDTHGTVVLVNKPKGWTSFTVCGKLRRLVKV 320

Query: 639  QKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQR 460
            +KVGHAGTLDPMATGLLIVC+GKATK+VDRYQGM+KGYSGVFRLGEATSTWDADSPVIQR
Sbjct: 321  KKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQR 380

Query: 459  EPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQ 280
            EPWEHIKD+DI+KA  SF GEIWQVPPMFSAIKVGGE+MYEKAR+GE++ELSPRRISI+Q
Sbjct: 381  EPWEHIKDEDIRKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQ 440

Query: 279  FDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWN 100
            F+IERSL DRQNL+FRV CSKGTY+RSLCAD GKALGSCAHL ALRRDSIGEYS DDAW 
Sbjct: 441  FNIERSLEDRQNLIFRVVCSKGTYVRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWE 500

Query: 99   FEELEEHITKGY 64
            F+ELEE ITK Y
Sbjct: 501  FKELEEAITKNY 512


>ref|XP_006289729.1| hypothetical protein CARUB_v10003297mg [Capsella rubella]
            gi|482558435|gb|EOA22627.1| hypothetical protein
            CARUB_v10003297mg [Capsella rubella]
          Length = 538

 Score =  565 bits (1455), Expect = e-158
 Identities = 318/537 (59%), Positives = 364/537 (67%), Gaps = 31/537 (5%)
 Frame = -3

Query: 1581 TLFLSYSA--AKLNPRLFA----RNPFSP--ARRLLSTTATPYPLYYELIRYRPVRGSTS 1426
            T  +S SA  A  +P  F+    RN   P  A   LSTT+TPYPL Y++I  RP + S S
Sbjct: 8    TRLMSSSARMAMTSPIFFSVKPMRNIHKPYLASLFLSTTSTPYPLQYDMIINRPTQSSLS 67

Query: 1425 --RRRLPNAHDGSDQPPPASSDAAEVLSDTAG--------SSSEAAMDXXXXXXXXXXXX 1276
              RRR P A + S  P  A  +    + +            S +  MD            
Sbjct: 68   QTRRRPPKAIE-SGSPESAEPEFDSWVDNKLALEREKGRPGSGDPEMDKAKRKYYSKRRK 126

Query: 1275 RMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQ 1096
            R+Y             + +VEL+PEV++F RLH REEELYF+D FAYPWEKDKHY+MVYQ
Sbjct: 127  RLYGSDSEDESSRKSDEGFVELKPEVVEFDRLHQREEELYFFDTFAYPWEKDKHYKMVYQ 186

Query: 1095 LEKKYFPQYSLDKAFVDPMEPVPPA--SAEEXXXXXXXXXXXXXXXXXXXXXERA----- 937
            LEKKYFP   LDKAF+ P E +     S +                      E+      
Sbjct: 187  LEKKYFPDQCLDKAFLQPGETLKKNDDSGKTRGKKKVGALAGKRNEAKRIGMEKCDEDDD 246

Query: 936  ----LIFFEESVEK--KDSLAIKSVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAE 775
                L+FF+E+ EK  K +   K VTEKKVE+FFK L K P   + +G  +        E
Sbjct: 247  GDDKLVFFDEAKEKEEKKNSEEKVVTEKKVEQFFKSLTKSP---SEKGVASGG---GDGE 300

Query: 774  SYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATG 595
             +LV R  ELPPRWDGP+GTV+LV+KPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATG
Sbjct: 301  PFLVTRNGELPPRWDGPNGTVLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATG 360

Query: 594  LLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAV 415
            LLIVCIGKATK+VDRYQGM+KGYSGVFRLGEATST DADSPVIQREPWEHIKDDDIKKA+
Sbjct: 361  LLIVCIGKATKVVDRYQGMIKGYSGVFRLGEATSTLDADSPVIQREPWEHIKDDDIKKAL 420

Query: 414  KSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVF 235
             SFLGEIWQVPPMFSAIKVGGE+MYEKAR+GETVELSPRRISI+QF+IERSL DRQNL+F
Sbjct: 421  TSFLGEIWQVPPMFSAIKVGGEKMYEKARRGETVELSPRRISIFQFEIERSLDDRQNLIF 480

Query: 234  RVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGY 64
            RV CSKGTYIRSLCADL KALGSCAHL ALRRDSIGEYS +DAW F ELE  ITK Y
Sbjct: 481  RVICSKGTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAITKNY 537


>gb|EPS69260.1| hypothetical protein M569_05504, partial [Genlisea aurea]
          Length = 473

 Score =  564 bits (1454), Expect = e-158
 Identities = 295/501 (58%), Positives = 346/501 (69%), Gaps = 18/501 (3%)
 Frame = -3

Query: 1509 RRLLSTTATPYPLYYELIRYRPV----RGSTSRRRLPNAHDGSDQPPPASSDAA------ 1360
            RR LSTTAT YPL YE+I   PV    R  T RRR P A   S +   +  DA       
Sbjct: 1    RRSLSTTATRYPLQYEMIMSSPVNPPSREVTRRRRSPYALPDSGEARDSGGDAEIGFEEW 60

Query: 1359 ---EVLSDTAGSSSEAAMDXXXXXXXXXXXXRMYXXXXXXXXXXXXXD----EYVELEPE 1201
               ++  +  G+ +E A D            RMY                  E++EL+ E
Sbjct: 61   VEKKLSKNNEGTEAEIATDRSKRKYYRKRRKRMYGVESDSDEERGGRRRNEGEFIELKQE 120

Query: 1200 VIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYSLDKAFVDPMEPVPPA 1021
            V+     H RE+ELYFYDAFAYPWEK KHYRMVYQLEKKYFP +  DKAF+DP +  P  
Sbjct: 121  VVQMRNFHKREQELYFYDAFAYPWEKGKHYRMVYQLEKKYFPDHCFDKAFLDPEKATPQK 180

Query: 1020 SAEEXXXXXXXXXXXXXXXXXXXXXERALIFFEESVEKKDS-LAIKSVTEKKVEEFFKCL 844
            +  E                         IFFEE+ +  DS + ++ V+EKKV EFFKCL
Sbjct: 181  TTNEVHHDS------------------GAIFFEENNKSDDSTVRVEDVSEKKVGEFFKCL 222

Query: 843  RKVPKAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCG 664
            +K+P   N  G        E+   +L +R   LPP+WDGP+GT +LV+KPKGWTSFTVCG
Sbjct: 223  KKLP---NENGG-------EEIPPFLSSRSNGLPPKWDGPNGTALLVNKPKGWTSFTVCG 272

Query: 663  KLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWD 484
            KLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATK+VD+YQGM+KGYSG+FRLGEATSTWD
Sbjct: 273  KLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKVVDQYQGMIKGYSGMFRLGEATSTWD 332

Query: 483  ADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELS 304
            ADSPV++REPWEHI+D+D+KK   SF GEIWQVPPMFSAIKVGGERMYEKARKGE+V+LS
Sbjct: 333  ADSPVVKREPWEHIRDEDLKKTAASFCGEIWQVPPMFSAIKVGGERMYEKARKGESVQLS 392

Query: 303  PRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGE 124
            PRR+SI+ FD+ERSL DRQN+VFRV+CSKGTY+RSLCAD GKAL SCAHL ALRRDSIG+
Sbjct: 393  PRRVSIFGFDVERSLDDRQNVVFRVSCSKGTYVRSLCADFGKALSSCAHLTALRRDSIGK 452

Query: 123  YSVDDAWNFEELEEHITKGYL 61
            YS DDAW F+ELEE I KGYL
Sbjct: 453  YSADDAWEFQELEEQILKGYL 473


>gb|EOY02541.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 521

 Score =  562 bits (1448), Expect = e-157
 Identities = 307/526 (58%), Positives = 359/526 (68%), Gaps = 6/526 (1%)
 Frame = -3

Query: 1626 IAFLSPKMAT--SKLWSTLFLSYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIR 1453
            + FL PK+ +  +   S   LS  +  LN +L    P S      STT+TPYPL Y++I 
Sbjct: 3    LLFLRPKLVSFFTATQSLRLLSSKSNNLNKKLIFSKPLSSI--FFSTTSTPYPLQYDMII 60

Query: 1452 YRPVRG--STSRRRL--PNAHDGSDQPPPASSDAAEVLSDTAGSSSEAAMDXXXXXXXXX 1285
              P +   + +RRRL  P++ + +++  P      +   +   +  +  MD         
Sbjct: 61   NAPTKSQPTPTRRRLSRPDSPNSAEEENPEKELGFDSWVEKKLTLDDE-MDKSKRKYYRK 119

Query: 1284 XXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRM 1105
               RMY             D +VEL+P+V++F RLH REEELYFYD FAYPWEKDKHY+M
Sbjct: 120  RRKRMYGSDSEDDEKGKNEDGFVELKPKVVEFDRLHEREEELYFYDTFAYPWEKDKHYKM 179

Query: 1104 VYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERALIFF 925
            VYQLEKKYFP     KAF++P +     S E+                      + L+FF
Sbjct: 180  VYQLEKKYFPDQCFGKAFLEPGK-----SNEKNKDKGKSKKPGDDKEVED----KGLVFF 230

Query: 924  EESVEKKDSLAIKSVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAESYLVNRKTEL 745
            EE       +  K VTEKKVEEFFKCL+KVP              V   E YLV+R TEL
Sbjct: 231  EEEGNSGKDVK-KEVTEKKVEEFFKCLKKVPYNDTE---------VSAGEPYLVSRNTEL 280

Query: 744  PPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKAT 565
            PPRWDG  GTVVLV+KPKGWTSFTVCGKLRRL+KV+KVGHAGTLDPMATGLLIVC+GKAT
Sbjct: 281  PPRWDGQYGTVVLVNKPKGWTSFTVCGKLRRLIKVKKVGHAGTLDPMATGLLIVCVGKAT 340

Query: 564  KIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQV 385
            K VDRYQGM+KGYSGVFRLGEATSTWDADSPVIQREPWEHIKD+DIKK   SFLGEIWQV
Sbjct: 341  KFVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKKTAASFLGEIWQV 400

Query: 384  PPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYI 205
            PPMFSAIKVGGE+MY+KAR+GE++ELSPRRISI+ FDIERSL +RQNL+FRVTCSKGTYI
Sbjct: 401  PPMFSAIKVGGEKMYDKARRGESIELSPRRISIFHFDIERSLEERQNLIFRVTCSKGTYI 460

Query: 204  RSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKG 67
            RSLCADLGKALGSCAHL ALRRDSI     DDAW F+ELEE ITKG
Sbjct: 461  RSLCADLGKALGSCAHLTALRRDSI-----DDAWEFKELEEAITKG 501


>ref|XP_002873668.1| hypothetical protein ARALYDRAFT_488288 [Arabidopsis lyrata subsp.
            lyrata] gi|297319505|gb|EFH49927.1| hypothetical protein
            ARALYDRAFT_488288 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score =  561 bits (1447), Expect = e-157
 Identities = 316/538 (58%), Positives = 359/538 (66%), Gaps = 20/538 (3%)
 Frame = -3

Query: 1617 LSPKMATSKLWSTLFLSYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYRPVR 1438
            +S   A   + S+LF S     + PR     P+  A   LSTT+T YPL Y++I  RP +
Sbjct: 12   MSSSSARMCMTSSLFFS----SVKPRRNIHKPYL-ASLFLSTTSTRYPLQYDMIINRPTQ 66

Query: 1437 GSTS--RRRLPNAHDGS--DQPPPASS---DAAEVLSDTAG--SSSEAAMDXXXXXXXXX 1285
             S S  RRR P A +    D   P      D    L    G   S +  MD         
Sbjct: 67   SSLSQTRRRPPKAIESGAPDSAEPEFDSWVDNKLALEREQGRPGSGDPEMDKAKRKYYSK 126

Query: 1284 XXXRMYXXXXXXXXXXXXXDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRM 1105
               R+Y             + +VEL+P+V++F RLH REEELYFYD FAYPWEKDKHY+M
Sbjct: 127  RRKRLYGSDSEDESRRKSDEGFVELKPQVVEFDRLHQREEELYFYDTFAYPWEKDKHYKM 186

Query: 1104 VYQLEKKYFPQYSLDKAFVDPMEPVPPASAEEXXXXXXXXXXXXXXXXXXXXXERA---- 937
            VYQLEKKY+P   LDKAF+ P E V     ++                     +R     
Sbjct: 187  VYQLEKKYYPDQCLDKAFLQPGE-VSKKGDDDSGKVRGKKKVVAALGGKRNEVKRMGMEN 245

Query: 936  -------LIFFEESVEKKDSLAIKSVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQA 778
                   L+FF+E  EKK       VTEKKVE+FFK L K P   + +G  +        
Sbjct: 246  CVEDDDKLVFFDEVKEKKKPEDDVVVTEKKVEQFFKDLTKSP---SEKGVTSGG---GDG 299

Query: 777  ESYLVNRKTELPPRWDGPSGTVVLVDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMAT 598
            E +LV R  ELPPRWDGP+GTV+LV+KPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMAT
Sbjct: 300  EPFLVTRNGELPPRWDGPNGTVLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMAT 359

Query: 597  GLLIVCIGKATKIVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKA 418
            GLLIVCIGKATK+VDRYQGM+K YSGVFRLGEATST DADSPVIQREPWEHIKDDDIKKA
Sbjct: 360  GLLIVCIGKATKVVDRYQGMIKCYSGVFRLGEATSTLDADSPVIQREPWEHIKDDDIKKA 419

Query: 417  VKSFLGEIWQVPPMFSAIKVGGERMYEKARKGETVELSPRRISIYQFDIERSLGDRQNLV 238
            + SFLGEIWQVPPMFSAIKVGGE+MYEKAR+GETVELSPRRISI+QFDIERSL DRQNL+
Sbjct: 420  LTSFLGEIWQVPPMFSAIKVGGEKMYEKARRGETVELSPRRISIFQFDIERSLDDRQNLI 479

Query: 237  FRVTCSKGTYIRSLCADLGKALGSCAHLAALRRDSIGEYSVDDAWNFEELEEHITKGY 64
            FRV CSKGTYIRSLCADL KALGSCAHL ALRRDSIGEYS +DAW F ELE  ITK Y
Sbjct: 480  FRVICSKGTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAITKNY 537