BLASTX nr result
ID: Zingiber24_contig00012131
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00012131
(1062 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_001702067.1| putative uncharacterized protein [Escherichi... 217 7e-54
gb|AAX64155.1| hypothetical protein SCH_0249 [Salmonella enteric... 215 2e-53
ref|WP_002430992.1| hypothetical protein [Escherichia sp. 3_2_53... 212 2e-52
ref|WP_002464241.1| hypothetical protein [Shimwellia blattae] gi... 207 7e-51
gb|AAX66567.1| hypothetical protein SCH_2661 [Salmonella enteric... 206 1e-50
ref|WP_006686104.1| hypothetical protein [Citrobacter youngae] g... 124 2e-49
ref|WP_008808021.1| hypothetical protein [Klebsiella sp. 1_1_55]... 194 4e-47
ref|YP_008937858.1| protein of unknown function [Magnetospirillu... 179 2e-42
ref|WP_002001366.1| hypothetical protein [Vibrio cholerae] gi|39... 111 3e-35
ref|WP_001947521.1| hypothetical protein [Vibrio cholerae] gi|35... 111 3e-35
ref|WP_002001399.1| hypothetical protein [Vibrio cholerae] gi|39... 111 3e-35
ref|WP_004976427.1| hypothetical protein, partial [Acinetobacter... 120 4e-33
ref|WP_021723518.1| Putative Uncharacterized protein [Avibacteri... 106 4e-32
ref|WP_021723633.1| Putative Uncharacterized protein [Avibacteri... 106 4e-32
ref|WP_002430991.1| conserved hypothetical protein [Escherichia ... 141 4e-31
dbj|BAN86004.1| 23S ribosomal RNA [Acinetobacter baumannii NCGM ... 127 1e-26
ref|YP_005415573.1| hypothetical protein RSPPHO_03264, partial [... 76 2e-25
ref|WP_001376573.1| hypothetical protein [Escherichia coli] gi|3... 86 2e-25
ref|WP_021399582.1| hypothetical protein [[Clostridium] difficil... 105 5e-25
ref|WP_001894106.1| hypothetical protein, partial [Vibrio choler... 117 1e-23
>ref|WP_001702067.1| putative uncharacterized protein [Escherichia coli]
gi|412971812|emb|CCJ46478.1| putative uncharacterized
protein [Escherichia coli]
Length = 101
Score = 217 bits (552), Expect = 7e-54
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 60
Query: 177 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 61
IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN
Sbjct: 61 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 99
>gb|AAX64155.1| hypothetical protein SCH_0249 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 133
Score = 215 bits (548), Expect = 2e-53
Identities = 98/102 (96%), Positives = 98/102 (96%)
Frame = -1
Query: 366 SHCLYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH 187
SHCLYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH
Sbjct: 30 SHCLYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH 89
Query: 186 SMCIFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 61
S C FVYGAVTLYRAPFQTLPLTH LIQALG SPFARRYWGN
Sbjct: 90 STCAFVYGAVTLYRAPFQTLPLTHMLIQALGSSPFARRYWGN 131
>ref|WP_002430992.1| hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|91070847|gb|ABE05728.1| hypothetical protein
UTI89_C0222 [Escherichia coli UTI89]
gi|91073497|gb|ABE08378.1| hypothetical protein
UTI89_C2920 [Escherichia coli UTI89]
gi|91074278|gb|ABE09159.1| hypothetical protein
UTI89_C3719 [Escherichia coli UTI89]
gi|91074359|gb|ABE09240.1| hypothetical protein
UTI89_C3809 [Escherichia coli UTI89]
gi|91074858|gb|ABE09739.1| hypothetical protein
UTI89_C4315 [Escherichia coli UTI89]
gi|91074973|gb|ABE09854.1| hypothetical protein
UTI89_C4441 [Escherichia coli UTI89]
gi|91075095|gb|ABE09976.1| hypothetical protein
UTI89_C4567 [Escherichia coli UTI89]
gi|226903375|gb|EEH89634.1| hypothetical protein
ESAG_07159 [Escherichia sp. 3_2_53FAA]
Length = 101
Score = 212 bits (539), Expect = 2e-52
Identities = 96/99 (96%), Positives = 98/99 (98%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH+MC
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHNMC 60
Query: 177 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 61
IFVYGAVTLYRAPFQTLPLTHTLIQALG SPFARRYWGN
Sbjct: 61 IFVYGAVTLYRAPFQTLPLTHTLIQALGSSPFARRYWGN 99
>ref|WP_002464241.1| hypothetical protein [Shimwellia blattae]
gi|403193083|dbj|GAB83214.1| hypothetical protein
EB105725_51_00005 [Shimwellia blattae DSM 4481 = NBRC
105725]
Length = 101
Score = 207 bits (526), Expect = 7e-51
Identities = 92/99 (92%), Positives = 95/99 (95%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPH+QTGYHVSRPTHR H+MC
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHLQTGYHVSRPTHRVHNMC 60
Query: 177 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 61
IFVYGA TLYRA FQTLPLTHTLIQ LGCSPFARRYWGN
Sbjct: 61 IFVYGAFTLYRATFQTLPLTHTLIQTLGCSPFARRYWGN 99
>gb|AAX66567.1| hypothetical protein SCH_2661 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62129535|gb|AAX67238.1| hypothetical protein SCH_3332
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67] gi|62130006|gb|AAX67709.1|
hypothetical protein SCH_3803 [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|62130088|gb|AAX67791.1| hypothetical protein SCH_3885
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67] gi|62130226|gb|AAX67929.1|
hypothetical protein SCH_4023 [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|62130261|gb|AAX67964.1| hypothetical protein SCH_4058
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 101
Score = 206 bits (525), Expect = 1e-50
Identities = 94/99 (94%), Positives = 95/99 (95%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHS C
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSTC 60
Query: 177 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 61
FVYGAVTLYRAPFQTLPLTH LIQALG SPFARRYWGN
Sbjct: 61 AFVYGAVTLYRAPFQTLPLTHMLIQALGSSPFARRYWGN 99
>ref|WP_006686104.1| hypothetical protein [Citrobacter youngae]
gi|291069666|gb|EFE07775.1| hypothetical protein
CIT292_08808 [Citrobacter youngae ATCC 29220]
Length = 109
Score = 124 bits (311), Expect(2) = 2e-49
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHS 184
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPT RAH+
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTLRAHN 58
Score = 99.8 bits (247), Expect(2) = 2e-49
Identities = 47/58 (81%), Positives = 48/58 (82%)
Frame = -3
Query: 205 PYSSSSQHVHFCVRGCHPVSRAFPDASTNTHTDSGSGLLPVRSPLLGESRLISFPRGT 32
P + HVHFCVRG HPV AFPD STNTH DSGSGLLPVRSPLLGESRLISFPRGT
Sbjct: 52 PTLRAHNHVHFCVRGYHPVPSAFPDRSTNTHADSGSGLLPVRSPLLGESRLISFPRGT 109
>ref|WP_008808021.1| hypothetical protein [Klebsiella sp. 1_1_55]
gi|289774285|gb|EFD82300.1| hypothetical protein
HMPREF0485_05014 [Klebsiella sp. 1_1_55]
gi|499527998|emb|CCI74357.1| unnamed protein product
[Klebsiella pneumoniae]
Length = 101
Score = 194 bits (494), Expect = 4e-47
Identities = 86/99 (86%), Positives = 91/99 (91%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPT R H++C
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTLRVHNLC 60
Query: 177 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 61
I VYG +TLYR FQT+PLTH LIQ LGCSPFARRYWGN
Sbjct: 61 ILVYGTITLYRRTFQTVPLTHKLIQTLGCSPFARRYWGN 99
>ref|YP_008937858.1| protein of unknown function [Magnetospirillum gryphiswaldense MSR-1
v2] gi|568205844|ref|WP_024080208.1| hypothetical
protein [Magnetospirillum gryphiswaldense]
gi|78033430|emb|CAJ30045.1| conserved hypothetical
protein [Magnetospirillum gryphiswaldense MSR-1]
gi|566555979|emb|CDK99198.1| protein of unknown function
[Magnetospirillum gryphiswaldense MSR-1 v2]
Length = 259
Score = 179 bits (454), Expect = 2e-42
Identities = 106/205 (51%), Positives = 119/205 (58%)
Frame = -2
Query: 617 LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWLDHRVSGLYPAT*RPVKTRFPFGSPIR 438
+AFHP PQ+I FFN FGPPV VT PSTCPW+DH VSGL AT RP++TRF R
Sbjct: 1 MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSGLMHATRRPIQTRFRCAYTYR 60
Query: 437 LTLLQNISR*PIIQKVRSHTPKRAPTACTYTVXXXXXXXXXXXXXXXXXXXXSLSVSQEY 258
L L + K KRAPTAC ++V SLSV++EY
Sbjct: 61 LKLAAYTNSLTHYTKGTPSPFKRAPTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEY 120
Query: 257 LALEDGPPIFRQDTTCPALLIELTACAFLCTGLSPCIARLSXXXXXXXXXXRLWAAPRSL 78
L LEDGPP+FRQD TCPALL T F TGLSP +ARLS W PRSL
Sbjct: 121 LGLEDGPPMFRQDFTCPALLKADT--RFTPTGLSPAMARLSRRFRLCKYQH--WPGPRSL 176
Query: 77 AATGGISVDFFSSGYLDVSVPPVRL 3
A T G+SVD SSGYLDVSV PVRL
Sbjct: 177 ATTNGVSVDVLSSGYLDVSVRPVRL 201
>ref|WP_002001366.1| hypothetical protein [Vibrio cholerae] gi|395938267|gb|EJH48961.1|
hypothetical protein VCCP104821_0001 [Vibrio cholerae
CP1048(21)]
Length = 182
Score = 111 bits (277), Expect(2) = 3e-35
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 205
+YVHGFRF+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR
Sbjct: 1 MYVHGFRFYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 51
Score = 65.5 bits (158), Expect(2) = 3e-35
Identities = 39/64 (60%), Positives = 42/64 (65%)
Frame = -2
Query: 200 LIELTACAFLCTGLSPCIARLSXXXXXXXXXXRLWAAPRSLAATGGISVDFFSSGYLDVS 21
L++ T TGLSPCIA+LS L A P SLAAT GISVDFFSSGYLDVS
Sbjct: 52 LLDFTLDEASVTGLSPCIAKLSSLFTYFTEC--LRANPGSLAATTGISVDFFSSGYLDVS 109
Query: 20 VPPV 9
VPPV
Sbjct: 110 VPPV 113
>ref|WP_001947521.1| hypothetical protein [Vibrio cholerae] gi|356451365|gb|EHI04052.1|
hypothetical protein VCHC61A1_3636 [Vibrio cholerae
HC-61A1]
Length = 169
Score = 111 bits (277), Expect(2) = 3e-35
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 205
+YVHGFRF+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR
Sbjct: 1 MYVHGFRFYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 51
Score = 65.5 bits (158), Expect(2) = 3e-35
Identities = 39/64 (60%), Positives = 42/64 (65%)
Frame = -2
Query: 200 LIELTACAFLCTGLSPCIARLSXXXXXXXXXXRLWAAPRSLAATGGISVDFFSSGYLDVS 21
L++ T TGLSPCIA+LS L A P SLAAT GISVDFFSSGYLDVS
Sbjct: 52 LLDFTLDEASVTGLSPCIAKLSSLFTYFTEC--LRANPGSLAATTGISVDFFSSGYLDVS 109
Query: 20 VPPV 9
VPPV
Sbjct: 110 VPPV 113
>ref|WP_002001399.1| hypothetical protein [Vibrio cholerae] gi|395938197|gb|EJH48895.1|
hypothetical protein VCCP104821_0250 [Vibrio cholerae
CP1048(21)]
Length = 168
Score = 111 bits (277), Expect(2) = 3e-35
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 205
+YVHGFRF+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR
Sbjct: 1 MYVHGFRFYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 51
Score = 65.5 bits (158), Expect(2) = 3e-35
Identities = 39/64 (60%), Positives = 42/64 (65%)
Frame = -2
Query: 200 LIELTACAFLCTGLSPCIARLSXXXXXXXXXXRLWAAPRSLAATGGISVDFFSSGYLDVS 21
L++ T TGLSPCIA+LS L A P SLAAT GISVDFFSSGYLDVS
Sbjct: 52 LLDFTLDEASVTGLSPCIAKLSSLFTYFTEC--LRANPGSLAATTGISVDFFSSGYLDVS 109
Query: 20 VPPV 9
VPPV
Sbjct: 110 VPPV 113
>ref|WP_004976427.1| hypothetical protein, partial [Acinetobacter towneri]
gi|480030975|gb|ENV71128.1| hypothetical protein
F947_00014, partial [Acinetobacter towneri DSM 14962 =
CIP 107472]
Length = 164
Score = 120 bits (300), Expect(2) = 4e-33
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = -1
Query: 333 FFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMCIFVYGAVT 154
+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQT +HV RPT R H +C FVYG +T
Sbjct: 1 YFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTRFHVPRPT-RHHCVCPFVYGNIT 59
Query: 153 LYRAPFQTLPLTHTLIQAL 97
LY Q++PL HT + L
Sbjct: 60 LYVRTSQSVPLEHTQLNGL 78
Score = 49.3 bits (116), Expect(2) = 4e-33
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -3
Query: 100 SGLLPVRSPLLGESRLISFPRGT*MFQFPRFA 5
+GL P RSPLL ES+LISFP+GT MF FP FA
Sbjct: 76 NGLFPFRSPLLRESQLISFPKGTEMFHFPSFA 107
>ref|WP_021723518.1| Putative Uncharacterized protein [Avibacterium paragallinarum]
gi|523674915|emb|CDF98165.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
gi|523674965|emb|CDF98117.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
gi|523675456|emb|CDF97691.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
Length = 200
Score = 106 bits (265), Expect(2) = 4e-32
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+YV GFRF+FTPL GVLFAFPS+YWFTIGQSGVFSLGGWSPH+QTG+ VSRPT R S
Sbjct: 1 MYVQGFRFYFTPLTGVLFAFPSQYWFTIGQSGVFSLGGWSPHLQTGFLVSRPTSRKLSTT 60
Query: 177 IFV 169
++
Sbjct: 61 AWI 63
Score = 59.7 bits (143), Expect(2) = 4e-32
Identities = 37/62 (59%), Positives = 38/62 (61%)
Frame = -2
Query: 188 TACAFLCTGLSPCIARLSXXXXXXXXXXRLWAAPRSLAATGGISVDFFSSGYLDVSVPPV 9
T L TGLSPC+A L L A P SLAAT ISVDFFSSGYLDVSV PV
Sbjct: 59 TTAWILSTGLSPCVACLPRQFLYLCCYYLL-APPLSLAATHRISVDFFSSGYLDVSVLPV 117
Query: 8 RL 3
RL
Sbjct: 118 RL 119
>ref|WP_021723633.1| Putative Uncharacterized protein [Avibacterium paragallinarum]
gi|523674243|emb|CDF98816.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
gi|523675038|emb|CDF97944.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
Length = 200
Score = 106 bits (265), Expect(2) = 4e-32
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+YV GFRF+FTPL GVLFAFPS+YWFTIGQSGVFSLGGWSPH+QTG+ VSRPT R S
Sbjct: 1 MYVQGFRFYFTPLTGVLFAFPSQYWFTIGQSGVFSLGGWSPHLQTGFLVSRPTSRKLSTT 60
Query: 177 IFV 169
++
Sbjct: 61 AWI 63
Score = 59.7 bits (143), Expect(2) = 4e-32
Identities = 37/62 (59%), Positives = 38/62 (61%)
Frame = -2
Query: 188 TACAFLCTGLSPCIARLSXXXXXXXXXXRLWAAPRSLAATGGISVDFFSSGYLDVSVPPV 9
T L TGLSPC+A L L A P SLAAT ISVDFFSSGYLDVSV PV
Sbjct: 59 TTAWILSTGLSPCVACLPRQFLYLCCYYLL-APPLSLAATHRISVDFFSSGYLDVSVLPV 117
Query: 8 RL 3
RL
Sbjct: 118 RL 119
>ref|WP_002430991.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|226903374|gb|EEH89633.1| hypothetical protein
ESAG_07158 [Escherichia sp. 3_2_53FAA]
Length = 66
Score = 141 bits (356), Expect = 4e-31
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -3
Query: 715 MTPLPKQCSTPGDEFTRRYLNSFRGEPAISRFDWPFTPSHKSSANFSTLVGSVLQLVLPN 536
MTPLPKQCSTPGDEFTRRYLNSFRGEPAISRFDWPFTPSHKSSANFSTLVGSVLQLVLPN
Sbjct: 1 MTPLPKQCSTPGDEFTRRYLNSFRGEPAISRFDWPFTPSHKSSANFSTLVGSVLQLVLPN 60
Query: 535 LQPAHG 518
LQPAHG
Sbjct: 61 LQPAHG 66
>dbj|BAN86004.1| 23S ribosomal RNA [Acinetobacter baumannii NCGM 237]
gi|546201171|dbj|BAN86414.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546201203|dbj|BAN86446.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546203524|dbj|BAN88767.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546203935|dbj|BAN89178.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546204084|dbj|BAN89327.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
Length = 81
Score = 127 bits (318), Expect = 1e-26
Identities = 59/82 (71%), Positives = 66/82 (80%)
Frame = -1
Query: 357 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 178
+Y GFR +FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQT +HV RPT R H +C
Sbjct: 1 MYACGFRIYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTRFHVPRPT-RHHYVC 59
Query: 177 IFVYGAVTLYRAPFQTLPLTHT 112
FVYG +TLY Q++PL HT
Sbjct: 60 PFVYGNITLYVRTSQSVPLKHT 81
>ref|YP_005415573.1| hypothetical protein RSPPHO_03264, partial [Rhodospirillum
photometricum DSM 122] gi|504226142|ref|WP_014413244.1|
hypothetical protein, partial [Rhodospirillum
photometricum] gi|378401487|emb|CCG06603.1| unnamed
protein product, partial [Rhodospirillum photometricum
DSM 122]
Length = 114
Score = 76.3 bits (186), Expect(3) = 2e-25
Identities = 39/61 (63%), Positives = 41/61 (67%)
Frame = -2
Query: 599 PQVIR*FFNISRFGPPVSVTQPSTCPWLDHRVSGLYPAT*RPVKTRFPFGSPIRLTLLQN 420
PQVI FFN FGPPV VT PSTCPWLDH VSGL T RP+KTRF S RL L +
Sbjct: 1 PQVIPVFFNRRGFGPPVGVTPPSTCPWLDHPVSGLIRRTRRPLKTRFRCASTYRLKLARQ 60
Query: 419 I 417
I
Sbjct: 61 I 61
Score = 55.5 bits (132), Expect(3) = 2e-25
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = -3
Query: 367 LPLLVRTRFQVLFHSPRRGSFRLSLTVLVHYRSVRS 260
L LLV RFQ LFHSP RG+F LSLTVLVHYRS RS
Sbjct: 78 LRLLVGIRFQELFHSPHRGAFHLSLTVLVHYRSSRS 113
Score = 32.3 bits (72), Expect(3) = 2e-25
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 444 YSVNLATEYKSLTHYTKGTQS 382
Y + LA + KSLTHYTKGT S
Sbjct: 53 YRLKLARQIKSLTHYTKGTPS 73
>ref|WP_001376573.1| hypothetical protein [Escherichia coli] gi|345332775|gb|EGW65230.1|
hypothetical protein ECSTECB2F1_4404 [Escherichia coli
STEC_B2F1]
Length = 107
Score = 85.9 bits (211), Expect(2) = 2e-25
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -1
Query: 213 VSRPTHRAHSMCIFVYGAVTLYRAPFQTLPLTHTLIQALGCS 88
+SRPTHRAHSMCIFVYGAVTLYRAPFQTLPLTHTLIQALG S
Sbjct: 1 MSRPTHRAHSMCIFVYGAVTLYRAPFQTLPLTHTLIQALGSS 42
Score = 57.8 bits (138), Expect(2) = 2e-25
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -2
Query: 86 RSLAATGGISVDFFSSGYLDVSVPPVRL 3
RSLAATGGISVDFFSSGYLDVSVPPVRL
Sbjct: 43 RSLAATGGISVDFFSSGYLDVSVPPVRL 70
>ref|WP_021399582.1| hypothetical protein [[Clostridium] difficile]
gi|531382562|gb|EQG74591.1| hypothetical protein
QKA_3524 [Clostridium difficile DA00165]
gi|531641939|gb|EQJ20122.1| hypothetical protein
QS3_0132 [Clostridium difficile P13]
gi|531708916|gb|EQJ85959.1| hypothetical protein
QU7_0117 [Clostridium difficile P46]
gi|548681502|gb|ERM50695.1| hypothetical protein
QUG_0137 [Clostridium difficile P53]
gi|548683161|gb|ERM52323.1| hypothetical protein
QUQ_0118 [Clostridium difficile P68]
Length = 152
Score = 105 bits (261), Expect(3) = 5e-25
Identities = 61/117 (52%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = -2
Query: 710 PLAETVLYPRR*IHEALPK*LSGRTSYLPV*LAFHPQPQVIR*FFNISRFGPPVSVTQPS 531
PL +VLY R EA PK +SGRTSYL L FH PQVI FN FGPP + T S
Sbjct: 4 PLGHSVLYLRISHLEASPKAISGRTSYLRARLEFHRYPQVIPELFNARGFGPPRNFTFAS 63
Query: 530 TCPWLDHRVSGLYPAT*RPVKTRFPFGSPIR-LTLLQNISR*PIIQKVRSHTPKRAP 363
+C W+ VSGL T R VKTRF +GS ++ LTLL N++R P++QKVR HT P
Sbjct: 64 SCSWVGRPVSGLRQVTERSVKTRFRYGSHLKCLTLLLNVTRWPVLQKVRGHTRNVLP 120
Score = 28.9 bits (63), Expect(3) = 5e-25
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 373 SVLPLLVRTRFQVLFHSP 320
+VLP LV FQVLFHSP
Sbjct: 117 NVLPQLVSAGFQVLFHSP 134
Score = 28.5 bits (62), Expect(3) = 5e-25
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 345 GFRFFFTPLAGVLFAFPSRYW 283
GF+ F GVLF FPSRY+
Sbjct: 126 GFQVLFHSPPGVLFTFPSRYY 146
>ref|WP_001894106.1| hypothetical protein, partial [Vibrio cholerae]
gi|124113369|gb|EAY32189.1| conserved hypothetical
protein [Vibrio cholerae 1587]
Length = 171
Score = 117 bits (292), Expect = 1e-23
Identities = 72/118 (61%), Positives = 74/118 (62%)
Frame = -2
Query: 362 TACTYTVXXXXXXXXXXXXXXXXXXXXSLSVSQEYLALEDGPPIFRQDTTCPALLIELTA 183
TACTYTV SLSVSQEYLALEDGPPIFRQD TCPALL + T
Sbjct: 2 TACTYTVSGSISLPSQGFFSPFPHGTGSLSVSQEYLALEDGPPIFRQDITCPALL-DFTL 60
Query: 182 CAFLCTGLSPCIARLSXXXXXXXXXXRLWAAPRSLAATGGISVDFFSSGYLDVSVPPV 9
TGLSPCIA+LS L A P SLAAT GISVDFFSSGYLDVSVPPV
Sbjct: 61 DEASVTGLSPCIAKLS--SLFTYFTECLRANPGSLAATTGISVDFFSSGYLDVSVPPV 116