BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00012094
         (1691 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   537   e-150
ref|XP_006645183.1| PREDICTED: DNA repair protein recA homolog 3...   522   e-145
ref|XP_006345822.1| PREDICTED: DNA repair protein recA homolog 3...   522   e-145
ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group] g...   520   e-145
ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3...   519   e-144
gb|EMJ05248.1| hypothetical protein PRUPE_ppa026295mg [Prunus pe...   518   e-144
gb|EOY30426.1| RecA DNA recombination family protein [Theobroma ...   515   e-143
ref|XP_006475474.1| PREDICTED: DNA repair protein recA homolog 3...   511   e-142
ref|XP_004287571.1| PREDICTED: DNA repair protein recA homolog 3...   508   e-141
ref|XP_004507944.1| PREDICTED: DNA repair protein recA homolog 3...   506   e-140
ref|XP_006299374.1| hypothetical protein CARUB_v10015533mg [Caps...   504   e-140
ref|XP_003564854.1| PREDICTED: DNA repair protein recA homolog 3...   502   e-139
ref|XP_002308284.1| recA family protein [Populus trichocarpa] gi...   502   e-139
ref|XP_006409044.1| hypothetical protein EUTSA_v10022701mg [Eutr...   500   e-139
ref|XP_004507943.1| PREDICTED: DNA repair protein recA homolog 3...   499   e-138
dbj|BAJ97339.1| predicted protein [Hordeum vulgare subsp. vulgare]    499   e-138
ref|XP_004970942.1| PREDICTED: DNA repair protein recA homolog 3...   499   e-138
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3...   498   e-138
ref|XP_004507945.1| PREDICTED: DNA repair protein recA homolog 3...   498   e-138
ref|NP_001170211.1| putative recA DNA recombination family prote...   496   e-137

>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
            protein product [Vitis vinifera]
          Length = 421

 Score =  537 bits (1384), Expect = e-150
 Identities = 279/402 (69%), Positives = 325/402 (80%), Gaps = 7/402 (1%)
 Frame = +1

Query: 163  MARLLRHAS-LRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MARLLR+AS LR ++ A+E    G   +S QFC FSS+ +++SK D SD  +EN SKK+L
Sbjct: 1    MARLLRNASSLRHSLFAVEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKEL 60

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            AL+QALDQIT SFGKGSIMWLGRS +   VPV+STGSF LD+ LGIGGLPKGRVVEIYGP
Sbjct: 61   ALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGP 120

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALHVIAE+QK GGYC F+DAEHALDPALA+AIGVNT NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALS 180

Query: 700  LVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQA 879
            LVDTLIRSG              PK ELDGEMGDAH+A+QARLMSQALRKLSHSLS SQ 
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 880  ILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVSV 1059
            IL+F+NQ+RAK+STFGGFG   EVT GGNALKFYASVRLNIK IG V+K +E IG +V V
Sbjct: 241  ILIFINQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQVLV 300

Query: 1060 KIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKDA 1239
            K+VKNKHAPPF+TA+FELEFGKGI RESE++ELG KH F+ K G +MY +NGQ+FRGKDA
Sbjct: 301  KVVKNKHAPPFKTAQFELEFGKGICRESEIVELGCKHKFIIKGGGAMYSYNGQSFRGKDA 360

Query: 1240 IKHHLLENEADREDLITKLRQKILHDEAVKK------VDPDI 1347
            IK  L +NE++RE+L+ KLR+K++ +   +K      VD DI
Sbjct: 361  IKQFLSQNESEREELMRKLREKLVGETNKEKELEAEAVDEDI 402


>ref|XP_006645183.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Oryza brachyantha]
          Length = 426

 Score =  522 bits (1345), Expect = e-145
 Identities = 275/399 (68%), Positives = 319/399 (79%), Gaps = 5/399 (1%)
 Frame = +1

Query: 163  MARLLRHASLRRTICAL-----EIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQS 327
            MA LLR ASLRR I A      E +  G   S+F    FSS+AKKK K   +D G+EN S
Sbjct: 1    MATLLRRASLRRAIAAAAVSCPESYKQGVCGSTFHCRYFSSKAKKKVKPSGTDSGEENLS 60

Query: 328  KKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVE 507
            KKDLAL QA+DQIT++FGKG+IMWLGRS    EVPV+STGSF LD+ALGIGGLPKGRV+E
Sbjct: 61   KKDLALHQAIDQITSAFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPKGRVIE 120

Query: 508  IYGPEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGE 687
            +YGPEASGKTTLALHVIAE+QKNGGYCAF+DAEHALDPALA++IGVNT+NLLLSQPDCGE
Sbjct: 121  VYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVNTNNLLLSQPDCGE 180

Query: 688  QALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLS 867
            QALSLVDTLIRSG              PK+ELDGEMGDAHVALQARLMSQALRKLSHSLS
Sbjct: 181  QALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKLSHSLS 240

Query: 868  RSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGR 1047
             SQ ILLF+NQIR+K++TFGGFG   EVTSGGNALKFYASVR+NIK IG V+K +E IG 
Sbjct: 241  LSQTILLFINQIRSKVTTFGGFGGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEETIGS 300

Query: 1048 KVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFR 1227
            +V VKIVKNKHAPPF+TA+FELEFGKGI R SEL+ELGLKH  V K G + Y FN +++R
Sbjct: 301  QVLVKIVKNKHAPPFKTAQFELEFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEESYR 360

Query: 1228 GKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
            GKDA+K +L ENE+  ++L   LR K++  EA K+ + +
Sbjct: 361  GKDALKSYLNENESVAKELEANLR-KLMETEAPKRQEDE 398


>ref|XP_006345822.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Solanum tuberosum]
          Length = 418

 Score =  522 bits (1345), Expect = e-145
 Identities = 262/369 (71%), Positives = 304/369 (82%)
 Frame = +1

Query: 244  SFQFCKFSSQAKKKSKLDVSDCGKENQSKKDLALQQALDQITASFGKGSIMWLGRSHAPS 423
            S Q C +SS+ KKKS  D SD G+EN SKKDLAL+ ALDQIT SFGKGSIMWLGR+ +P 
Sbjct: 30   SDQLCYYSSRGKKKSNSDGSDSGEENLSKKDLALKHALDQITTSFGKGSIMWLGRTASPK 89

Query: 424  EVPVISTGSFLLDMALGIGGLPKGRVVEIYGPEASGKTTLALHVIAESQKNGGYCAFIDA 603
            +VPV+STGSF LD+ALGIGGLPKGRV+EIYGPEASGKTTLALHVIAE+QK GGYC F+DA
Sbjct: 90   QVPVVSTGSFSLDIALGIGGLPKGRVIEIYGPEASGKTTLALHVIAEAQKQGGYCCFVDA 149

Query: 604  EHALDPALAKAIGVNTHNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAEL 783
            EHAL+P LA+ IGVNT NLLLSQPDCGEQALSLVDT+IRSG              PK EL
Sbjct: 150  EHALNPTLAETIGVNTSNLLLSQPDCGEQALSLVDTIIRSGSVDVVVVDSVAALVPKGEL 209

Query: 784  DGEMGDAHVALQARLMSQALRKLSHSLSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGG 963
            +GEMGDAH+A+QARLMSQALRKLSHSLS SQ IL+F+NQ+R+K+STFGGFG   EVT GG
Sbjct: 210  EGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGGPSEVTCGG 269

Query: 964  NALKFYASVRLNIKHIGFVEKDKEIIGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRES 1143
            NALKFYASVRLNIK IG V+K +E IG +V VKIVKNKHAPPFRTAEFELEFGKGI RE+
Sbjct: 270  NALKFYASVRLNIKRIGLVKKGEETIGSQVLVKIVKNKHAPPFRTAEFELEFGKGISREA 329

Query: 1144 ELLELGLKHNFVTKSGLSMYGFNGQNFRGKDAIKHHLLENEADREDLITKLRQKILHDEA 1323
            EL++LG+KH F+TK G   Y  N QNFRG+DA+KH L EN + REDL+ KLR+K++ D+ 
Sbjct: 330  ELIDLGVKHKFITKGGGGYYSINNQNFRGRDAVKHFLSENTSAREDLMMKLREKLI-DQG 388

Query: 1324 VKKVDPDIN 1350
             K+  PD++
Sbjct: 389  DKEKGPDVD 397


>ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
            gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza
            sativa Japonica Group] gi|56784869|dbj|BAD82109.1|
            putative recA protein [Oryza sativa Japonica Group]
            gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa
            Japonica Group] gi|222619696|gb|EEE55828.1| hypothetical
            protein OsJ_04434 [Oryza sativa Japonica Group]
          Length = 429

 Score =  520 bits (1340), Expect = e-145
 Identities = 273/402 (67%), Positives = 320/402 (79%), Gaps = 8/402 (1%)
 Frame = +1

Query: 163  MARLLRHASLRRTICAL--------EIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKE 318
            MA LLR ASLRR + A+        E +  G   S+F    FSS+AKKK+K   +D G+E
Sbjct: 1    MANLLRRASLRRAVAAVAAAAAPCPESYKQGICGSTFHCRYFSSKAKKKTKSSGTDSGEE 60

Query: 319  NQSKKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGR 498
            N SKKDLAL QA+DQIT++FGKG+IMWLGRS    EVPV+STGSF LD+ALG GGLPKGR
Sbjct: 61   NLSKKDLALHQAIDQITSAFGKGAIMWLGRSEGRREVPVVSTGSFSLDLALGTGGLPKGR 120

Query: 499  VVEIYGPEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPD 678
            V+E+YGPEASGKTTLALHVIAE+QK+GGYCAF+DAEHALDPALA++IGVNT NLLLSQPD
Sbjct: 121  VIEVYGPEASGKTTLALHVIAEAQKHGGYCAFVDAEHALDPALAESIGVNTSNLLLSQPD 180

Query: 679  CGEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSH 858
            CGEQALSLVDTLIRSG              PK+ELDGEMGDAHVALQARLMSQALRKLSH
Sbjct: 181  CGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKLSH 240

Query: 859  SLSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEI 1038
            SLS SQ ILLF+NQIR+K++TFGGFG   EVTSGGNALKFYASVR+NIK IG V+K +E 
Sbjct: 241  SLSLSQTILLFINQIRSKVTTFGGFGGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEET 300

Query: 1039 IGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQ 1218
            IG +V VKIVKNKHAPPF+TA+FELEFGKGI R SEL+ELGLKH  V K G + Y FN +
Sbjct: 301  IGSQVLVKIVKNKHAPPFKTAQFELEFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEE 360

Query: 1219 NFRGKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
            ++RGKDA+K +L ENE+  ++L T LR K++  +A KK + +
Sbjct: 361  SYRGKDALKSYLNENESIAKELETNLR-KLMETQAPKKQEDE 401


>ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Solanum lycopersicum]
          Length = 418

 Score =  519 bits (1337), Expect = e-144
 Identities = 262/369 (71%), Positives = 303/369 (82%)
 Frame = +1

Query: 244  SFQFCKFSSQAKKKSKLDVSDCGKENQSKKDLALQQALDQITASFGKGSIMWLGRSHAPS 423
            S Q C FSS+ KKKS  D SD G+EN SKKDLAL+ ALDQIT SFGKGSIMWLGR+ +P 
Sbjct: 30   SDQLCYFSSRGKKKSNSDGSDSGEENLSKKDLALKHALDQITTSFGKGSIMWLGRTVSPK 89

Query: 424  EVPVISTGSFLLDMALGIGGLPKGRVVEIYGPEASGKTTLALHVIAESQKNGGYCAFIDA 603
            +VPV+STGSF LD+ALGIGGLPKGRV+EIYGPEASGKTTLALHVIAE+QK GGYC F+DA
Sbjct: 90   QVPVVSTGSFSLDIALGIGGLPKGRVIEIYGPEASGKTTLALHVIAEAQKQGGYCCFVDA 149

Query: 604  EHALDPALAKAIGVNTHNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAEL 783
            EHAL+P LA+ IGVNT NLLLSQPDCGEQALSLVDT+IRSG              PK EL
Sbjct: 150  EHALNPTLAETIGVNTSNLLLSQPDCGEQALSLVDTIIRSGSVDVVVVDSVAALVPKGEL 209

Query: 784  DGEMGDAHVALQARLMSQALRKLSHSLSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGG 963
            +GEMGDAH+A+QARLMSQALRKLSHSLS SQ IL+F+NQ+R+K+STFGGFG   EVT GG
Sbjct: 210  EGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGGPSEVTCGG 269

Query: 964  NALKFYASVRLNIKHIGFVEKDKEIIGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRES 1143
            NALKFYASVRLNIK IGFV+K +E IG +V VKIVKNKHAPPFRTAEFELEFGKGI RE+
Sbjct: 270  NALKFYASVRLNIKRIGFVKKGEETIGSQVLVKIVKNKHAPPFRTAEFELEFGKGISREA 329

Query: 1144 ELLELGLKHNFVTKSGLSMYGFNGQNFRGKDAIKHHLLENEADREDLITKLRQKILHDEA 1323
            EL++LG+KH F+TK G   Y  N QNFRG+DA+K  L EN + REDL+ KLR+K++ D+ 
Sbjct: 330  ELIDLGVKHKFITKGGGGYYNINNQNFRGRDAVKLFLSENTSAREDLMMKLREKLI-DQG 388

Query: 1324 VKKVDPDIN 1350
              +  PD++
Sbjct: 389  DNEKGPDVD 397


>gb|EMJ05248.1| hypothetical protein PRUPE_ppa026295mg [Prunus persica]
          Length = 415

 Score =  518 bits (1334), Expect = e-144
 Identities = 268/384 (69%), Positives = 308/384 (80%), Gaps = 1/384 (0%)
 Frame = +1

Query: 163  MARLLRHA-SLRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MARLLR+A S++R +   ++H  G    S Q C FSS+ +KKSK D SD  +EN SKKDL
Sbjct: 1    MARLLRNALSMKRFLFPPQVHRRGILVPSTQLCNFSSKGRKKSKSDGSDSNEENMSKKDL 60

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            ALQQALDQIT+SFGKGSIMWLGRS +P +VPV+STGSF LD+ALG GG PKGRVVEI+GP
Sbjct: 61   ALQQALDQITSSFGKGSIMWLGRSASPRQVPVVSTGSFALDLALGTGGFPKGRVVEIFGP 120

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALHVIAE+QK GGYC F+DAEHALDP+LA+AIGVNT NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPSLAQAIGVNTENLLLSQPDCGEQALS 180

Query: 700  LVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQA 879
            LVDTLIRSG              PK ELDGEMGDAH+A+QARLMSQALRKLSHSLS SQ 
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 880  ILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVSV 1059
            IL+F NQ+R+K+STFGGFG   EV  GGNALKFYASVRLNI+ IG ++K +E +G +V V
Sbjct: 241  ILIFTNQVRSKISTFGGFGGPTEVPCGGNALKFYASVRLNIRRIGLIKKGEETLGSQVQV 300

Query: 1060 KIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKDA 1239
            KIVKNK APPFRT   ELEFGKGI RESE++ELG+K+ FVTKSG S Y  NGQNF GKDA
Sbjct: 301  KIVKNKLAPPFRTVHIELEFGKGICRESEIIELGVKNKFVTKSG-SHYNLNGQNFHGKDA 359

Query: 1240 IKHHLLENEADREDLITKLRQKIL 1311
            +K  L EN    E+L TKLR+K++
Sbjct: 360  LKRFLAENNTAMEELTTKLREKLV 383


>gb|EOY30426.1| RecA DNA recombination family protein [Theobroma cacao]
          Length = 420

 Score =  515 bits (1327), Expect = e-143
 Identities = 270/397 (68%), Positives = 315/397 (79%), Gaps = 1/397 (0%)
 Frame = +1

Query: 163  MARLLRH-ASLRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MAR LR+ +SL+R++ A E+   G   SS Q C FSS+ ++KSK D SD   EN SKK+L
Sbjct: 1    MARFLRNISSLKRSLIAPEVCRRGVLGSSSQLCSFSSKGRRKSKSDGSDSCDENMSKKEL 60

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            AL+QALDQIT+SFGKGSIMWLGRS +P +VPV+STGSF LD+ALG GGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 120

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALHVIAE+QK GGYC F+DAEHALD ALA+AIGVNT NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALS 180

Query: 700  LVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQA 879
            LVDTLIRSG              PK ELDGEMGDAH+A+QARLMSQALRKLSHSLS SQ 
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 880  ILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVSV 1059
            IL+FVNQ+R+K+STFGGFG   EVT GGNALKFYASVRLNI+  G V+K +E IG +V V
Sbjct: 241  ILIFVNQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLV 300

Query: 1060 KIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKDA 1239
            KIVKNK APPF+TA+FELEFG+GI RE E+++L LKH FVTKSG + Y FN +   GK+A
Sbjct: 301  KIVKNKLAPPFKTAQFELEFGRGISREGEIIDLALKHKFVTKSG-AFYSFNDKKIHGKEA 359

Query: 1240 IKHHLLENEADREDLITKLRQKILHDEAVKKVDPDIN 1350
             K  L ENE+  E+L+ KLR+K+L  E  K+   DI+
Sbjct: 360  FKKFLAENESACEELVMKLREKLLEAERKKERQTDIS 396


>ref|XP_006475474.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Citrus sinensis]
          Length = 427

 Score =  511 bits (1315), Expect = e-142
 Identities = 269/394 (68%), Positives = 313/394 (79%), Gaps = 9/394 (2%)
 Frame = +1

Query: 163  MARLLRHASLRRTICALEIHGDGTGASSF---------QFCKFSSQAKKKSKLDVSDCGK 315
            MA LLR+ASL R  C L +        SF         Q C FSS++K+KSK D SD G+
Sbjct: 1    MASLLRNASLLRR-CLLSVSPPHPHPQSFRGGMLETSTQICNFSSKSKRKSKSDGSDSGE 59

Query: 316  ENQSKKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKG 495
            EN SKKDLALQQALDQIT+SFGKGSIMWLGRS  P  VPV+STGSF LD+ALG GGLPKG
Sbjct: 60   ENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 119

Query: 496  RVVEIYGPEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQP 675
            RVVEIYGPEASGKTTLALHVIAE+Q+ GGYC FIDAEHALDP+LA+ IGV T NLLL+QP
Sbjct: 120  RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 179

Query: 676  DCGEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLS 855
            DCGEQALSLVDTLIRSG              PK ELDGEMGDAH+A+QARLMSQALRKLS
Sbjct: 180  DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 239

Query: 856  HSLSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKE 1035
            HSLS SQ IL+F+NQ+RAK+STF GFG   EVT GGNALKFYASVRLNIK IG V+K +E
Sbjct: 240  HSLSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 298

Query: 1036 IIGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNG 1215
             IG +++VKIVKNK APPF+TA+FELEFGKGI RESE+++L LKH F +K+G +M+ +N 
Sbjct: 299  TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFTSKAG-AMFTYND 357

Query: 1216 QNFRGKDAIKHHLLENEADREDLITKLRQKILHD 1317
            +NFRGK+A K  L+ENE+ RE+L+ KLR+K++ D
Sbjct: 358  RNFRGKEAFKQFLVENESVREELVIKLREKLVVD 391


>ref|XP_004287571.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  508 bits (1307), Expect = e-141
 Identities = 266/395 (67%), Positives = 309/395 (78%), Gaps = 1/395 (0%)
 Frame = +1

Query: 163  MARLLRHA-SLRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MARLL++A S++R +   + +  G  +SS QFC FS++ KKKSK D SD G EN SKKDL
Sbjct: 1    MARLLQNALSMKRFLLPPQGYRRGLLSSSSQFCNFSTKGKKKSKSDGSDSGGENMSKKDL 60

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            ALQQALDQIT SFGKGSIMWLGRS  P  V V+STGSF LD+ALG GG PKGRVVEIYGP
Sbjct: 61   ALQQALDQITESFGKGSIMWLGRSSGPRNVEVVSTGSFSLDLALGTGGFPKGRVVEIYGP 120

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALH IAE+QK GGYC F+DAEHALDP LA+ IGV T NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHAIAEAQKQGGYCVFVDAEHALDPTLAQRIGVKTENLLLSQPDCGEQALS 180

Query: 700  LVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQA 879
            LVDTLIRSG              PK ELDGEMGDAH+A+QARLMSQALRKLSHSLS S+ 
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSKT 240

Query: 880  ILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVSV 1059
            IL+F NQ+R+K+STFGGFG  QEVT GGNALKFYASVRLNI+ +G ++K +EI+G +V V
Sbjct: 241  ILIFTNQVRSKLSTFGGFGGPQEVTCGGNALKFYASVRLNIRRVGSIKKGEEIVGSQVQV 300

Query: 1060 KIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKDA 1239
            KIVKNK APPFR    ELEFGKG  RESEL+ELGLK+ F+ K G S Y  NGQNF GKDA
Sbjct: 301  KIVKNKLAPPFRNVLLELEFGKGFSRESELIELGLKNKFIIKGG-SHYNLNGQNFHGKDA 359

Query: 1240 IKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
            +K  L E++  RE+L  KLR+K++  +A++  DP+
Sbjct: 360  LKRFLSEDDTAREELTLKLREKLV--DALEDKDPE 392


>ref|XP_004507944.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X2 [Cicer arietinum]
          Length = 426

 Score =  506 bits (1302), Expect = e-140
 Identities = 267/404 (66%), Positives = 319/404 (78%), Gaps = 10/404 (2%)
 Frame = +1

Query: 163  MARLLRHAS-LRRTICALEIH--------GDGTGASS-FQFCKFSSQAKKKSKLDVSDCG 312
            MA LLR+ S L R++ A ++H        G   G SS FQ   FSS+ +++SK D SD G
Sbjct: 1    MAMLLRNTSFLTRSLFAAQVHTRSLFAAQGFKLGLSSTFQVLSFSSKGRRRSKSDGSDSG 60

Query: 313  KENQSKKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPK 492
            +EN SKKDLAL+QALDQIT++FGKGSIMWLGRS  P +VPV+STGSF LD+ALGIGGLPK
Sbjct: 61   EENMSKKDLALKQALDQITSTFGKGSIMWLGRSDWPKDVPVVSTGSFALDIALGIGGLPK 120

Query: 493  GRVVEIYGPEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQ 672
            GRVVEIYGPEASGKTTLALHVIAE+QK GGYC F+DAEHALD  LA++IGVNT NLLLSQ
Sbjct: 121  GRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTQNLLLSQ 180

Query: 673  PDCGEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKL 852
            PDCGEQALSLVDTLIRSG              PK ELDGEMGDAH+A+QARLMSQALRKL
Sbjct: 181  PDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 240

Query: 853  SHSLSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDK 1032
            SHSLS SQ+IL+F+NQ+R+K+STFGGF    EVT GGNALKFYASVRLNIK IGFV+K +
Sbjct: 241  SHSLSLSQSILIFINQVRSKLSTFGGFSGPTEVTCGGNALKFYASVRLNIKRIGFVKKGE 300

Query: 1033 EIIGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFN 1212
            E++G +V VK+VKNK APPF+TAEFEL+FGKGI RE+E+++L LK+  ++K+G SMY FN
Sbjct: 301  EVVGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLSLKYKLISKAG-SMYYFN 359

Query: 1213 GQNFRGKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
              NFRG DA+++ L EN +  E+L  K+R+KIL  E  K  + D
Sbjct: 360  EHNFRGVDALRNFLAENYSALEELEMKIREKILKPETDKVTESD 403


>ref|XP_006299374.1| hypothetical protein CARUB_v10015533mg [Capsella rubella]
            gi|482568083|gb|EOA32272.1| hypothetical protein
            CARUB_v10015533mg [Capsella rubella]
          Length = 430

 Score =  504 bits (1297), Expect = e-140
 Identities = 255/391 (65%), Positives = 315/391 (80%), Gaps = 1/391 (0%)
 Frame = +1

Query: 163  MARLLRH-ASLRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MAR+LR+ +SLRR++ + E+       +SFQ   F+++AKKKSK D +   +E  SKK++
Sbjct: 1    MARILRNVSSLRRSLFSSEVFNSSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEI 60

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            ALQ+ALDQIT+SFGKGSIMWLGR+ +P  VPV STGSF LD+ALG+GGLPKGRVVEIYGP
Sbjct: 61   ALQEALDQITSSFGKGSIMWLGRAVSPRNVPVFSTGSFALDLALGVGGLPKGRVVEIYGP 120

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALHVIAE+QK GG C F+DAEHALD +LAKAIGVNT NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALS 180

Query: 700  LVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQA 879
            LVDTLIRSG              PK EL+GEMGDAH+A+QARLMSQALRKLSHSLS SQ 
Sbjct: 181  LVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 880  ILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVSV 1059
            +L+F+NQ+R+K+STFGGFG   EVT GGNALKFYAS+RLNIK IG ++K +E  G +VSV
Sbjct: 241  LLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVSV 300

Query: 1060 KIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKDA 1239
            KIVKNK APPFRTA+FELEFGKGI + +E+++L +KH F+ K+G + Y  NG+N+ GK+A
Sbjct: 301  KIVKNKLAPPFRTAQFELEFGKGICKVTEIIDLSIKHKFIAKNG-TFYNLNGKNYHGKEA 359

Query: 1240 IKHHLLENEADREDLITKLRQKILHDEAVKK 1332
            +K  L +NE+D+E+L+ KL+ K++ DEA  K
Sbjct: 360  LKKFLRQNESDQEELMKKLQDKLMADEAADK 390


>ref|XP_003564854.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Brachypodium distachyon]
          Length = 429

 Score =  502 bits (1292), Expect = e-139
 Identities = 270/402 (67%), Positives = 313/402 (77%), Gaps = 8/402 (1%)
 Frame = +1

Query: 163  MARLLRHASLRRTICAL------EIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQ 324
            MA LLR AS+RR I A+      E +      S+F    F+S+AKKK+K   +D G+EN 
Sbjct: 1    MATLLRRASVRRAIAAVASSPCPESYRQVICGSTFHCRDFASKAKKKTKSSGTDSGEENM 60

Query: 325  SKKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVV 504
            SKKDLAL QA+DQIT+SFGKG+IMWLGRS    EVPV+STGSF LD+ALGIGGLPKGRVV
Sbjct: 61   SKKDLALHQAIDQITSSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPKGRVV 120

Query: 505  EIYGPEASGKTTLALHVIAESQKNGG--YCAFIDAEHALDPALAKAIGVNTHNLLLSQPD 678
            E+YGPEASGKTTLALHVIAE+QK+GG  YCAFIDAEHALDP+LA++IGV+T NLLLSQPD
Sbjct: 121  EVYGPEASGKTTLALHVIAEAQKHGGGGYCAFIDAEHALDPSLAESIGVDTSNLLLSQPD 180

Query: 679  CGEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSH 858
              EQALSLVDTLIRSG              PK ELDGEMGDAHVALQARLMSQALRKLSH
Sbjct: 181  SAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSH 240

Query: 859  SLSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEI 1038
            SLS SQ ILLF+NQIRAK+STFGGFG   EVTSGGNALKFYASVRLNI+ +G V+K +E 
Sbjct: 241  SLSLSQTILLFINQIRAKVSTFGGFGGPTEVTSGGNALKFYASVRLNIRRVGLVKKGEET 300

Query: 1039 IGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQ 1218
            IG +V+VKIVKNKHAPPFRTA+FELEFGKGI R SEL+ELGLKH  V K+G + Y FN +
Sbjct: 301  IGSQVNVKIVKNKHAPPFRTAQFELEFGKGISRSSELVELGLKHKLVKKTGGAYYSFNEK 360

Query: 1219 NFRGKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
             F GKDA+K  L  NE+  ++L  +LR+ I  +  +K+   D
Sbjct: 361  AFHGKDALKSFLTGNESIAKELEMELRRLIETEAPIKQEAED 402


>ref|XP_002308284.1| recA family protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
            recA family protein [Populus trichocarpa]
          Length = 418

 Score =  502 bits (1292), Expect = e-139
 Identities = 261/387 (67%), Positives = 307/387 (79%), Gaps = 1/387 (0%)
 Frame = +1

Query: 163  MARLLRHAS-LRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MARLLR+AS LRR + A E    G   +S Q C F+++ K+KSK D S+ G+EN SKK+L
Sbjct: 1    MARLLRNASSLRRALVAPEGIRRGVLGTSTQICNFATKGKRKSKSDGSESGEENMSKKEL 60

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            ALQQALDQIT+ FGKG+IMW GRS AP  VPV+STGSF LD+ALG GG PKGRVVEI+GP
Sbjct: 61   ALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVVEIFGP 120

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALHVIAE+QK GGYC F+DAEHALD +LAKAIGVNT NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALS 180

Query: 700  LVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQA 879
            LVDTLIRSG              PK+ELDGEMGDAH+A+QARLMSQALRKLSHSLS+SQ 
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSQSQT 240

Query: 880  ILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVSV 1059
            IL+F+NQ+RAK+STF GFG   EVT GGNALKFYASVRLNI+ +GF++K +E  G +V V
Sbjct: 241  ILVFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGTQVQV 299

Query: 1060 KIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKDA 1239
            KIVKNK APPF+T +FELEFGKGI RESE++EL LKH  + KSG S Y  NG+ + GK+A
Sbjct: 300  KIVKNKLAPPFKTVQFELEFGKGISRESEIIELALKHKLIKKSG-SFYDCNGKKYHGKEA 358

Query: 1240 IKHHLLENEADREDLITKLRQKILHDE 1320
             K  L  N+  +E+L+ KLR+K+L  E
Sbjct: 359  FKEFLAHNDDVQEELMMKLREKLLEGE 385


>ref|XP_006409044.1| hypothetical protein EUTSA_v10022701mg [Eutrema salsugineum]
            gi|557110206|gb|ESQ50497.1| hypothetical protein
            EUTSA_v10022701mg [Eutrema salsugineum]
          Length = 424

 Score =  500 bits (1288), Expect = e-139
 Identities = 255/391 (65%), Positives = 312/391 (79%), Gaps = 1/391 (0%)
 Frame = +1

Query: 163  MARLLRH-ASLRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MAR+LR  +SLR ++ + E+   G   +SFQ   FS++AKKKSK D +   +E  SKK++
Sbjct: 1    MARILRSVSSLRHSLFSSEVFSRGVVGTSFQLRGFSAKAKKKSKSDGNGSSEEGMSKKEV 60

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            ALQQA+DQIT SFGKGSIMWLGR+ +P +VPV STGSF LD+ALG+GGLPKGRVVEIYGP
Sbjct: 61   ALQQAIDQITTSFGKGSIMWLGRAVSPKDVPVYSTGSFALDLALGVGGLPKGRVVEIYGP 120

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALHVIAE+QK GG C F+DAEHALD +LAKAIGVNT NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALS 180

Query: 700  LVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQA 879
            LVDTLIRSG              PK EL+GEMGDAH+A+QARLMSQALRKLSHSLS SQ 
Sbjct: 181  LVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 880  ILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVSV 1059
            +L+F+NQ+RAK+STFGGFG   EVT GGNALKFYAS+RLNI+ +G V+K +E  G +V+V
Sbjct: 241  LLIFINQVRAKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRVGLVKKGEETTGSQVAV 300

Query: 1060 KIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKDA 1239
            KIVKNK APPFRTA+FELEFGKGI + +E++EL +KH F+ K+G + Y  NG+N+ GK+A
Sbjct: 301  KIVKNKLAPPFRTAQFELEFGKGICKVTEIIELSIKHKFIAKNG-TFYNLNGKNYHGKEA 359

Query: 1240 IKHHLLENEADREDLITKLRQKILHDEAVKK 1332
            +K  L +NE  +E+L+ KL+ K++ DEA  K
Sbjct: 360  LKKFLRQNEPVQEELMNKLKDKLIVDEAADK 390


>ref|XP_004507943.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X1 [Cicer arietinum]
          Length = 431

 Score =  499 bits (1286), Expect = e-138
 Identities = 267/409 (65%), Positives = 319/409 (77%), Gaps = 15/409 (3%)
 Frame = +1

Query: 163  MARLLRHAS-LRRTICALEIH--------GDGTGASS-FQFCKFSSQAKKKSKLDVSDCG 312
            MA LLR+ S L R++ A ++H        G   G SS FQ   FSS+ +++SK D SD G
Sbjct: 1    MAMLLRNTSFLTRSLFAAQVHTRSLFAAQGFKLGLSSTFQVLSFSSKGRRRSKSDGSDSG 60

Query: 313  KENQSKKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPK 492
            +EN SKKDLAL+QALDQIT++FGKGSIMWLGRS  P +VPV+STGSF LD+ALGIGGLPK
Sbjct: 61   EENMSKKDLALKQALDQITSTFGKGSIMWLGRSDWPKDVPVVSTGSFALDIALGIGGLPK 120

Query: 493  GRVVEIYGPEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQ 672
            GRVVEIYGPEASGKTTLALHVIAE+QK GGYC F+DAEHALD  LA++IGVNT NLLLSQ
Sbjct: 121  GRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTQNLLLSQ 180

Query: 673  PDCGEQALSLVDTLIRSG-----XXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQ 837
            PDCGEQALSLVDTLIRSG                   PK ELDGEMGDAH+A+QARLMSQ
Sbjct: 181  PDCGEQALSLVDTLIRSGSVDVIVVDSGSINKVAALVPKGELDGEMGDAHMAMQARLMSQ 240

Query: 838  ALRKLSHSLSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGF 1017
            ALRKLSHSLS SQ+IL+F+NQ+R+K+STFGGF    EVT GGNALKFYASVRLNIK IGF
Sbjct: 241  ALRKLSHSLSLSQSILIFINQVRSKLSTFGGFSGPTEVTCGGNALKFYASVRLNIKRIGF 300

Query: 1018 VEKDKEIIGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLS 1197
            V+K +E++G +V VK+VKNK APPF+TAEFEL+FGKGI RE+E+++L LK+  ++K+G S
Sbjct: 301  VKKGEEVVGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLSLKYKLISKAG-S 359

Query: 1198 MYGFNGQNFRGKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
            MY FN  NFRG DA+++ L EN +  E+L  K+R+KIL  E  K  + D
Sbjct: 360  MYYFNEHNFRGVDALRNFLAENYSALEELEMKIREKILKPETDKVTESD 408


>dbj|BAJ97339.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 429

 Score =  499 bits (1286), Expect = e-138
 Identities = 269/390 (68%), Positives = 304/390 (77%), Gaps = 8/390 (2%)
 Frame = +1

Query: 163  MARLLRHASLRRTICAL-----EIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQS 327
            MA LLR ASLRR I +      E +      SSF    F+S+AKKKSK   +D G+EN S
Sbjct: 1    MATLLRRASLRRAIASAAASCPESYRQVICGSSFHCRDFASKAKKKSKSSGTDSGEENMS 60

Query: 328  KKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVE 507
            KKDLAL QA+DQIT SFGKG+IMWLGRS    EVPV+STGSF LD+ALGIGGLPKGRV+E
Sbjct: 61   KKDLALHQAIDQITTSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPKGRVIE 120

Query: 508  IYGPEASGKTTLALHVIAESQK--NGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDC 681
            +YGPEASGKTTLALHVIAE+QK   GGYCAF+DAEHALDP LA++IGV+T NLLLSQPD 
Sbjct: 121  VYGPEASGKTTLALHVIAEAQKLSGGGYCAFVDAEHALDPTLAESIGVDTSNLLLSQPDS 180

Query: 682  GEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHS 861
             EQALSLVDTLIRSG              PK ELDGEMGDAHVALQARLMSQALRKLSHS
Sbjct: 181  AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 240

Query: 862  LSRSQAILLFVNQIRAKMSTF-GGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEI 1038
            LS SQ +LLF+NQIR+K+ TF GGFG  QEVTSGGNALKFYASVRLNI+ IG V+K +EI
Sbjct: 241  LSLSQTVLLFINQIRSKVQTFGGGFGGPQEVTSGGNALKFYASVRLNIRRIGMVKKGEEI 300

Query: 1039 IGRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQ 1218
            IG +V+VKIVKNKHAPPFRTA+FELEFGKGI R SEL ELGLKH  V K+G + Y FN Q
Sbjct: 301  IGSQVTVKIVKNKHAPPFRTAQFELEFGKGICRSSELFELGLKHKLVKKTGGAYYSFNEQ 360

Query: 1219 NFRGKDAIKHHLLENEADREDLITKLRQKI 1308
             F GKDA+K  L +NE   ++L  +LR+ I
Sbjct: 361  QFHGKDAVKSFLTKNEGAAKELEMELRRLI 390


>ref|XP_004970942.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Setaria italica]
          Length = 427

 Score =  499 bits (1285), Expect = e-138
 Identities = 267/401 (66%), Positives = 310/401 (77%), Gaps = 7/401 (1%)
 Frame = +1

Query: 163  MARLLRHASLRRTICAL-------EIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKEN 321
            MA LLR  SLRR I A        E +  G   S+F   +FSS+AKKKSK   +D G+EN
Sbjct: 1    MATLLRRVSLRRAIAAASYSSSHPESYKQGICGSTFHCREFSSKAKKKSKSSGTDSGEEN 60

Query: 322  QSKKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRV 501
             SKKDLAL QA+DQIT++FGKG+IMWLGRS    +VPVISTGSF LDMALG GG PKGRV
Sbjct: 61   MSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVISTGSFALDMALGTGGFPKGRV 120

Query: 502  VEIYGPEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDC 681
            +E+YGPEASGKTTLALHVIAE+QKNGGYCAF+DAEHALDPALA++IGV+T+NLLLSQPDC
Sbjct: 121  IEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLLSQPDC 180

Query: 682  GEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHS 861
             EQALSLVDTLIRSG              PK ELDGEMGDAHVALQARLMSQALRKLSHS
Sbjct: 181  AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 240

Query: 862  LSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEII 1041
            LS SQ ILLF+NQ RAK++TF GFG   EVTSGGNALKFYASVRLNIK IG V+K +E I
Sbjct: 241  LSLSQTILLFINQTRAKVATF-GFGGPTEVTSGGNALKFYASVRLNIKRIGLVKKGEETI 299

Query: 1042 GRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQN 1221
            G +V+VKIVKNKHAPPF+TA+FE+EFGKGI R SEL+ELGLK   + K   + Y FN   
Sbjct: 300  GSQVAVKIVKNKHAPPFKTAQFEIEFGKGICRSSELVELGLKRKLIKKISGAYYSFNDIT 359

Query: 1222 FRGKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
            F GKD +K +L ENE+  +DL  +L+ K++  EA K+ + +
Sbjct: 360  FHGKDNLKSYLTENESVAKDLEMQLK-KLMETEAPKEQEAE 399


>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Glycine
            max]
          Length = 459

 Score =  498 bits (1282), Expect = e-138
 Identities = 259/397 (65%), Positives = 318/397 (80%), Gaps = 1/397 (0%)
 Frame = +1

Query: 160  AMARLLRHASL-RRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKD 336
            +MARLLR+ SL  R++   ++   G   +S Q   FSS+ +++SK D SD G+EN SKK+
Sbjct: 26   SMARLLRNTSLLTRSLFFPKVFKLGMIGTS-QILSFSSKGRRRSKSDGSDSGEENMSKKE 84

Query: 337  LALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYG 516
            LALQQALDQIT++FGKGSIMWLGRS +P  VPV+STGSF LD+ALGIGGLPKGRVVEIYG
Sbjct: 85   LALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRVVEIYG 144

Query: 517  PEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQAL 696
            PEASGKTTLALHVIAE+QK GGYC F+DAEHALD  LA++IGVNT NLLLSQPDCGEQAL
Sbjct: 145  PEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDCGEQAL 204

Query: 697  SLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSLSRSQ 876
            SLVDTLIRSG              PK ELDGEMGDAH+A+QARLMSQALRKLSH+LS SQ
Sbjct: 205  SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSLSQ 264

Query: 877  AILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIGRKVS 1056
             IL+F+NQ+R+K+STFGGF    EVT GGNALKFYASVRLNIK IGFV+K +EI+G +V 
Sbjct: 265  TILIFINQVRSKISTFGGFSGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEILGSQVL 324

Query: 1057 VKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNFRGKD 1236
            VK+VKNK APPF+TAEFEL+FGKGI +E+E+++L + H  ++K+G +M+ +N  +FRGKD
Sbjct: 325  VKVVKNKLAPPFKTAEFELQFGKGICKETEIIDLSVNHKLISKAG-AMFYYNEHSFRGKD 383

Query: 1237 AIKHHLLENEADREDLITKLRQKILHDEAVKKVDPDI 1347
            A+K+ L EN +  E+L  KLR+K+L+ E  K  + D+
Sbjct: 384  ALKNFLAENRSALEELEMKLREKLLNAETEKMQESDV 420


>ref|XP_004507945.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X3 [Cicer arietinum]
          Length = 421

 Score =  498 bits (1281), Expect = e-138
 Identities = 264/400 (66%), Positives = 317/400 (79%), Gaps = 6/400 (1%)
 Frame = +1

Query: 163  MARLLRHAS-LRRTICALEIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKENQSKKDL 339
            MA LLR+ S L R++ A +    G  +S+FQ   FSS+ +++SK D SD G+EN SKKDL
Sbjct: 1    MAMLLRNTSFLTRSLFAAQGFKLGL-SSTFQVLSFSSKGRRRSKSDGSDSGEENMSKKDL 59

Query: 340  ALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRVVEIYGP 519
            AL+QALDQIT++FGKGSIMWLGRS  P +VPV+STGSF LD+ALGIGGLPKGRVVEIYGP
Sbjct: 60   ALKQALDQITSTFGKGSIMWLGRSDWPKDVPVVSTGSFALDIALGIGGLPKGRVVEIYGP 119

Query: 520  EASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDCGEQALS 699
            EASGKTTLALHVIAE+QK GGYC F+DAEHALD  LA++IGVNT NLLLSQPDCGEQALS
Sbjct: 120  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTQNLLLSQPDCGEQALS 179

Query: 700  LVDTLIRSG-----XXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHSL 864
            LVDTLIRSG                   PK ELDGEMGDAH+A+QARLMSQALRKLSHSL
Sbjct: 180  LVDTLIRSGSVDVIVVDSGSINKVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 239

Query: 865  SRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEIIG 1044
            S SQ+IL+F+NQ+R+K+STFGGF    EVT GGNALKFYASVRLNIK IGFV+K +E++G
Sbjct: 240  SLSQSILIFINQVRSKLSTFGGFSGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEVVG 299

Query: 1045 RKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQNF 1224
             +V VK+VKNK APPF+TAEFEL+FGKGI RE+E+++L LK+  ++K+G SMY FN  NF
Sbjct: 300  SQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLSLKYKLISKAG-SMYYFNEHNF 358

Query: 1225 RGKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPD 1344
            RG DA+++ L EN +  E+L  K+R+KIL  E  K  + D
Sbjct: 359  RGVDALRNFLAENYSALEELEMKIREKILKPETDKVTESD 398


>ref|NP_001170211.1| putative recA DNA recombination family protein [Zea mays]
            gi|224034357|gb|ACN36254.1| unknown [Zea mays]
            gi|414879173|tpg|DAA56304.1| TPA: putative recA DNA
            recombination family protein [Zea mays]
          Length = 425

 Score =  496 bits (1277), Expect = e-137
 Identities = 266/406 (65%), Positives = 315/406 (77%), Gaps = 7/406 (1%)
 Frame = +1

Query: 163  MARLLRHASLRRTICAL-------EIHGDGTGASSFQFCKFSSQAKKKSKLDVSDCGKEN 321
            M  LLR ASLRR I A        E +  G   S+F   +F+S+AKKKS    +D G+EN
Sbjct: 1    MTTLLRRASLRRVIAAAAASSFHPESYKQGICGSTFHCREFASKAKKKSS--GTDSGEEN 58

Query: 322  QSKKDLALQQALDQITASFGKGSIMWLGRSHAPSEVPVISTGSFLLDMALGIGGLPKGRV 501
             SKKDLAL QA+DQIT++FGKG+IMWLGRS    +VPV+STGS  LDMALG GGLPKGRV
Sbjct: 59   MSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVVSTGSLDLDMALGTGGLPKGRV 118

Query: 502  VEIYGPEASGKTTLALHVIAESQKNGGYCAFIDAEHALDPALAKAIGVNTHNLLLSQPDC 681
            VE+YGPEASGKTTLALHVIAE+QKNGGYCAF+DAEHALDPALA++IGV+T+NLLLSQPDC
Sbjct: 119  VEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLLSQPDC 178

Query: 682  GEQALSLVDTLIRSGXXXXXXXXXXXXXXPKAELDGEMGDAHVALQARLMSQALRKLSHS 861
             EQALSLVDTLIRSG              PK ELDGEMGDAH+ALQARLMSQALRKLSHS
Sbjct: 179  AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHIALQARLMSQALRKLSHS 238

Query: 862  LSRSQAILLFVNQIRAKMSTFGGFGVTQEVTSGGNALKFYASVRLNIKHIGFVEKDKEII 1041
            LS SQ ILLF+NQIRAK++TF GFG   EVTSGGNALKFYASVRLNI+ IG V+K +E I
Sbjct: 239  LSLSQTILLFINQIRAKVATF-GFGGPTEVTSGGNALKFYASVRLNIRRIGLVKKGEETI 297

Query: 1042 GRKVSVKIVKNKHAPPFRTAEFELEFGKGIRRESELLELGLKHNFVTKSGLSMYGFNGQN 1221
            G +++VKIVKNKHAPPF+TA+FELEFGKGI R SEL ELGLKH  + KSG S Y FNG+ 
Sbjct: 298  GSQIAVKIVKNKHAPPFKTAQFELEFGKGICRSSELFELGLKHKLIRKSGGSYYSFNGKA 357

Query: 1222 FRGKDAIKHHLLENEADREDLITKLRQKILHDEAVKKVDPDINTQN 1359
            F GK  +K +L EN++   DL  +L+ +++  +A K+ +   ++Q+
Sbjct: 358  FNGKSNLKSYLTENKSVANDLEMELK-RLMGTDASKEQEAGDSSQS 402