BLASTX nr result

ID: Zingiber24_contig00011858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00011858
         (279 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21070.1| unknown [Picea sitchensis]                              58   1e-06
ref|XP_006839015.1| hypothetical protein AMTR_s00002p00272080 [A...    56   6e-06
gb|EOY05736.1| 20S proteasome beta subunit D1 [Theobroma cacao]        55   7e-06

>gb|ABK21070.1| unknown [Picea sitchensis]
          Length = 215

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3

Query: 3   PNFVIKIVDKDGAKEYAWRETIKDAEEPTA*EL 101
           PNFVIKIVDKDGA+EY WR+TI+DA EP A EL
Sbjct: 175 PNFVIKIVDKDGAREYGWRKTIEDASEPPAAEL 207


>ref|XP_006839015.1| hypothetical protein AMTR_s00002p00272080 [Amborella trichopoda]
           gi|548841521|gb|ERN01584.1| hypothetical protein
           AMTR_s00002p00272080 [Amborella trichopoda]
          Length = 206

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   PNFVIKIVDKDGAKEYAWRETIKDAEEP 86
           PNFVIKIVDKDGA+EYAWRET+KDA  P
Sbjct: 175 PNFVIKIVDKDGAREYAWRETVKDAGAP 202


>gb|EOY05736.1| 20S proteasome beta subunit D1 [Theobroma cacao]
          Length = 204

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +3

Query: 3   PNFVIKIVDKDGAKEYAWRETIKDAEEPTA 92
           PNFVIKIVDKDGA+EYAWRE++KDAE  +A
Sbjct: 175 PNFVIKIVDKDGAREYAWRESVKDAEVASA 204


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