BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00011824
         (745 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [S...   174   3e-41
ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II tra...   174   4e-41
ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea ma...   171   2e-40
ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   167   4e-39
gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hy...   164   4e-38
ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group] g...   161   2e-37
gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japo...   161   2e-37
ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822...   160   3e-37
ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II tra...   159   9e-37
gb|EMS61166.1| hypothetical protein TRIUR3_03686 [Triticum urartu]    153   5e-35
gb|EMJ05807.1| hypothetical protein PRUPE_ppa002594mg [Prunus pe...   153   7e-35
gb|EOY31012.1| RNA polymerase II transcription mediators isoform...   152   9e-35
gb|EOY31009.1| RNA polymerase II transcription mediators isoform...   152   9e-35
gb|EMT20869.1| hypothetical protein F775_22791 [Aegilops tauschii]    152   1e-34
gb|EMT09196.1| hypothetical protein F775_08586 [Aegilops tauschii]    150   3e-34
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...   150   3e-34
dbj|BAK07358.1| predicted protein [Hordeum vulgare subsp. vulgare]    147   4e-33
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr...   144   4e-32
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...   143   5e-32
ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II tra...   142   9e-32

>ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [Sorghum bicolor]
           gi|241929498|gb|EES02643.1| hypothetical protein
           SORBIDRAFT_03g008700 [Sorghum bicolor]
          Length = 659

 Score =  174 bits (441), Expect = 3e-41
 Identities = 92/247 (37%), Positives = 149/247 (60%), Gaps = 1/247 (0%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +++ +     N+  + ++K+             K+ L + DVN  +K 
Sbjct: 219 LSVQIPQKSFRSLTLQFRGDIANNAERSAIKKKEGTLTNTTTEAEKDVLENGDVNKSIKH 278

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L +IH+SIF +QVFD V  E++  S GINVTGM EDFLQLA+GQ+ ++ LSL    
Sbjct: 279 AHSILRDIHKSIFEEQVFDMVIRETFVQSQGINVTGMCEDFLQLAIGQECSLCLSL-ELS 337

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFHKN 545
           +++   +++G   +   +  ++++ A+  +N K+  N++  G P+   LEIY++H+FH+N
Sbjct: 338 RQNSISETVGQEDHMDTD--YTENLAVATVNGKESSNKDVRGFPNPKCLEIYLLHMFHEN 395

Query: 546 SVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSRIPFVQ 722
            + +L+EK                 CG LSHFC T++HRIFSNKV  E+E +VSR+P++ 
Sbjct: 396 ILRKLREKSRHMVRYQSSAQAAPDDCGLLSHFCMTVSHRIFSNKVHLELESVVSRVPYLH 455

Query: 723 LLSHPPW 743
           L S P W
Sbjct: 456 LCSLPTW 462


>ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Setaria italica]
          Length = 661

 Score =  174 bits (440), Expect = 4e-41
 Identities = 96/248 (38%), Positives = 148/248 (59%), Gaps = 2/248 (0%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +S+ +     N+    + K+             K+ L ++DVN  VK 
Sbjct: 220 LSVQIPQKSFRSLSLQFYGDTANNAESSASKKKEDTLSSSSSETDKDALENDDVNKSVKQ 279

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L +IH+SIF +QVFD V  ++++ S GINVTGM EDFLQLA+GQ+ ++ L LVP  
Sbjct: 280 AHSILRDIHKSIFEEQVFDMVIRDTFTQSQGINVTGMCEDFLQLAIGQECSLCLLLVPSG 339

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSSALVVINEK-DVLNENNFGVPSSAGLEIYVMHIFHK 542
           +  +  +++G   +  +E  +S + A+  +N K + LN++  G P+   LEIY++H+FH+
Sbjct: 340 QNSD-SETVGQEDHMDSE--YSGNLAVATVNGKQESLNKDLRGFPNPKSLEIYLLHMFHE 396

Query: 543 NSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSRIPFV 719
             V +++EK                 CG L HFC T+AHRIFSNKV  E+E +VSR+P++
Sbjct: 397 KIVRKIREKSRFVVRYQSPAQIAPEECGLLGHFCMTVAHRIFSNKVHLELESVVSRVPYL 456

Query: 720 QLLSHPPW 743
            L S P W
Sbjct: 457 HLCSLPTW 464


>ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea mays]
           gi|194704804|gb|ACF86486.1| unknown [Zea mays]
           gi|219884585|gb|ACL52667.1| unknown [Zea mays]
           gi|413947117|gb|AFW79766.1| hypothetical protein
           ZEAMMB73_523859 [Zea mays]
          Length = 661

 Score =  171 bits (433), Expect = 2e-40
 Identities = 96/252 (38%), Positives = 145/252 (57%), Gaps = 6/252 (2%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +S+ +     N+    ++K+             K+ L D+DVN  ++ 
Sbjct: 219 LSVQIPQKSLRSLSLKFHGDIVNNAESSAIKKKEGTLTNTTAEAEKDVLADDDVNKSIRY 278

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L +IH+SIF +QVFD V  E+++ S GINVTGM EDFLQLA+GQ+ ++ LSL    
Sbjct: 279 AHSILRDIHKSIFEEQVFDMVIRETFNQSQGINVTGMCEDFLQLAIGQECSLCLSLE--- 335

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSS-----ALVVINEKDVLNENNFGVPSSAGLEIYVMH 530
                L    ++  T  +  H D++     A+  +N K+  N++  G P+   LEIY++H
Sbjct: 336 -----LSGQNNNAGTVGQQDHMDTNYPGNLAVATVNGKESSNKDVRGFPNPKSLEIYLLH 390

Query: 531 IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSR 707
           +FH+  + +L+EK                 CG LSHFC T+AHRIFSNKV  E+E +VSR
Sbjct: 391 MFHE-ILRKLREKSRHVVRYQSSAQAAPDDCGLLSHFCMTVAHRIFSNKVHLELESVVSR 449

Query: 708 IPFVQLLSHPPW 743
           +P++ L S P W
Sbjct: 450 VPYLHLRSLPTW 461


>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
           gi|147821405|emb|CAN63500.1| hypothetical protein
           VITISV_011675 [Vitis vinifera]
           gi|297738929|emb|CBI28174.3| unnamed protein product
           [Vitis vinifera]
          Length = 660

 Score =  167 bits (422), Expect = 4e-39
 Identities = 92/248 (37%), Positives = 140/248 (56%), Gaps = 1/248 (0%)
 Frame = +3

Query: 3   LLAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVK 182
           +LA+  P  S + +   +      +  K+  K   Y  DE+     K+ L+D   N  VK
Sbjct: 216 MLAVHLPPNSCRALHFGFLGGHLGNIPKEPSKTKTYGPDELPSKEIKKPLSD---NECVK 272

Query: 183 DTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPF 362
           +THSVL E HQ+IF +QVFD V  E+++ S G+NVTG+RE++LQL +GQ  ++++SLVP 
Sbjct: 273 ETHSVLREGHQAIFDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNIGQGASVFMSLVPS 332

Query: 363 KKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFHK 542
            ++++  D MG     +   P      + + + K   ++   G P+    EIY+  +FH+
Sbjct: 333 GQDEKTADGMGMQNLESAILPMDTFDGVKLSDGKHDNDKKKSGFPNRISSEIYLKQLFHE 392

Query: 543 NSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSRIPFV 719
           +  VR K+K I                G L HFC ++AHRIFS+KVL E+E LVSR+P++
Sbjct: 393 HVFVRAKDKHISAGRTQPSSQPAKDGFGLLGHFCMSLAHRIFSSKVLMELENLVSRVPYL 452

Query: 720 QLLSHPPW 743
            LLSHP W
Sbjct: 453 HLLSHPTW 460


>gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hypothetical protein
           ZEAMMB73_010825 [Zea mays] gi|413926581|gb|AFW66513.1|
           hypothetical protein ZEAMMB73_010825 [Zea mays]
          Length = 660

 Score =  164 bits (414), Expect = 4e-38
 Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 6/252 (2%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQK    +S+ +     N+    ++KR              + L ++DVN   + 
Sbjct: 219 LSVQIPQKCFHSLSLRFHGDIANNAESSAVKRKEGTLTNTTTGAENDVLENDDVNKSTEH 278

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L +IH+SIF +QVFD V  E++  S GINVTGM EDFLQLA+GQ+ ++ LS     
Sbjct: 279 AHSILRDIHKSIFEEQVFDMVIQETFIQSQGINVTGMCEDFLQLAIGQECSLCLS----- 333

Query: 366 KEDEFLDSMGHSQNTTNEHPHSD-----SSALVVINEKDVLNENNFGVPSSAGLEIYVMH 530
                L    ++  T  +  H D     + A+  +N K+  N++  G P+   LEIY++H
Sbjct: 334 ---HDLSGQNNNSGTVGQEDHMDIDHTGNLAVATVNGKESSNKDVRGFPNPKSLEIYLLH 390

Query: 531 IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSR 707
           +FH+  + +L+EK                 CG LSHFC T++HRIFS+KV  E+E +VSR
Sbjct: 391 VFHEGILRKLREKSRHVVRYQSSAQGTPDECGLLSHFCMTVSHRIFSSKVHLELESVVSR 450

Query: 708 IPFVQLLSHPPW 743
           +P++ L S P W
Sbjct: 451 VPYLHLCSLPTW 462


>ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group]
           gi|77556810|gb|ABA99606.1| expressed protein [Oryza
           sativa Japonica Group] gi|113649888|dbj|BAF30400.1|
           Os12g0638600 [Oryza sativa Japonica Group]
           gi|215694565|dbj|BAG89558.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218187319|gb|EEC69746.1| hypothetical protein
           OsI_39278 [Oryza sativa Indica Group]
          Length = 655

 Score =  161 bits (407), Expect = 2e-37
 Identities = 99/252 (39%), Positives = 142/252 (56%), Gaps = 6/252 (2%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +S+++     N       K      D I      ET  D DVN  +K 
Sbjct: 219 LSVQVPQKSCRFLSLNFRGDSANGVENYGHKLK----DGISSITSSETDND-DVNKSIKH 273

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPF- 362
            HS+L  IH+SIF +QVFD V  E++  S GINVTGMREDFLQLA+GQ+ ++ LSL    
Sbjct: 274 AHSILRNIHKSIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAHSG 333

Query: 363 -KKEDEFLDSMGHSQNTTNEHPHSDSSALVVI---NEKDVLNENNFGVPSSAGLEIYVMH 530
              + E +D   H+ +        D+S LV++    + D L ++  G P+   LEIY++ 
Sbjct: 334 DGSDSEMVDHEDHANS-------EDASNLVLVTMNGKLDPLRKDVTGFPNPRSLEIYLLQ 386

Query: 531 IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSR 707
           +FH+N + +++EK +                G L HFC T+AHRIFSNKVL E+E +VSR
Sbjct: 387 LFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSR 446

Query: 708 IPFVQLLSHPPW 743
           +P++ L S P W
Sbjct: 447 VPYLHLRSLPTW 458


>gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japonica Group]
          Length = 655

 Score =  161 bits (407), Expect = 2e-37
 Identities = 99/252 (39%), Positives = 142/252 (56%), Gaps = 6/252 (2%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +S+++     N       K      D I      ET  D DVN  +K 
Sbjct: 219 LSVQVPQKSCRFLSLNFRGDSANGVENYGHKLK----DGISSITSSETDND-DVNKSIKH 273

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPF- 362
            HS+L  IH+SIF +QVFD V  E++  S GINVTGMREDFLQLA+GQ+ ++ LSL    
Sbjct: 274 AHSILRNIHKSIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAHSG 333

Query: 363 -KKEDEFLDSMGHSQNTTNEHPHSDSSALVVI---NEKDVLNENNFGVPSSAGLEIYVMH 530
              + E +D   H+ +        D+S LV++    + D L ++  G P+   LEIY++ 
Sbjct: 334 DGSDSEMVDHEDHANS-------EDASNLVLVTMNGKLDPLRKDVTGFPNPRSLEIYLLQ 386

Query: 531 IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSR 707
           +FH+N + +++EK +                G L HFC T+AHRIFSNKVL E+E +VSR
Sbjct: 387 LFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSR 446

Query: 708 IPFVQLLSHPPW 743
           +P++ L S P W
Sbjct: 447 VPYLHLRSLPTW 458


>ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822959 [Brachypodium
           distachyon]
          Length = 656

 Score =  160 bits (406), Expect = 3e-37
 Identities = 98/249 (39%), Positives = 139/249 (55%), Gaps = 3/249 (1%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +S+     + +S    + K     S     A   + L ++DVN  VK 
Sbjct: 218 LSVQVPQKSCRFLSLQLRGDNASSAESYACKMKGISSTT--SAAENDALENDDVNKSVKH 275

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L  IH+SIF +QVFD V  E++ PS GINVTGMREDFLQLA+GQ+  + LSL    
Sbjct: 276 AHSILRNIHKSIFEEQVFDMVIRETFVPSQGINVTGMREDFLQLAIGQENLLCLSL---- 331

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSSALVV--INEKDVLNENNFGVPSSAGLEIYVMHIFH 539
            E   LD+    +         D+S LV+  IN K   ++ +    +   LEIY++H+FH
Sbjct: 332 -EHSGLDTDSEMEGLEEPTDSEDASNLVLATINGKQEPSKMDASGLNPKSLEIYLLHMFH 390

Query: 540 KNSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSRIPF 716
           +N + +++EK                 C  L HFC T+AHRIFSNKV  E+E +VSR+P+
Sbjct: 391 ENILRKVREKYRNIVRYPSPAQAAGDDCNLLGHFCMTVAHRIFSNKVHLELESVVSRVPY 450

Query: 717 VQLLSHPPW 743
           + L S P W
Sbjct: 451 LHLQSLPTW 459


>ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Oryza brachyantha]
          Length = 583

 Score =  159 bits (402), Expect = 9e-37
 Identities = 97/252 (38%), Positives = 144/252 (57%), Gaps = 6/252 (2%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +S+++     N       K     S+    A   +   D DVN  +K+
Sbjct: 143 LSVQVPQKSCRFLSLNFRGDSTNGAESYGYKLKDGISNITPSATENDADND-DVNKSIKN 201

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L  IH+SIF +QVFD V  E++  S GINVTGMREDFLQL++GQ+ ++ LSL    
Sbjct: 202 AHSILRNIHESIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLSIGQECSLCLSLA--- 258

Query: 366 KEDEFLDS--MGHSQNTTNEHPHSDSSALVVI---NEKDVLNENNFGVPSSAGLEIYVMH 530
              + +DS  +G    T +E    D+S+LV+     ++D L ++  G P+   LEIY++ 
Sbjct: 259 HSGDGIDSEMVGREGRTNSE----DASSLVLATMNGKQDPLRKDVIGFPNPRSLEIYLLQ 314

Query: 531 IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSR 707
           +FH N + +++EK +                G L HFC T+AHRIFSNKVL E+E +VS 
Sbjct: 315 LFHANILRKVREKSLNVGRYQSPAQVAGDDYGLLGHFCMTVAHRIFSNKVLLELESVVSG 374

Query: 708 IPFVQLLSHPPW 743
           +P++ L S P W
Sbjct: 375 VPYLHLRSLPTW 386


>gb|EMS61166.1| hypothetical protein TRIUR3_03686 [Triticum urartu]
          Length = 570

 Score =  153 bits (387), Expect = 5e-35
 Identities = 91/254 (35%), Positives = 141/254 (55%), Gaps = 8/254 (3%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQKS + +S+ +     N     + +     S     A       D+DVN  VK 
Sbjct: 123 LSVQVPQKSCRFLSLQFHRDSANGPESYACRTKGVSSTTSSAAEDDVLGDDDDVNKSVKQ 182

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L  IH+SIF +QV D V  E++  + G+NVTGMREDFLQLA+G+++ + LSLV   
Sbjct: 183 AHSILRNIHKSIFEEQVLDMVIRETFVQTQGVNVTGMREDFLQLAIGEESLLCLSLVD-S 241

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSSALVVI----NEKDVLNENNFGVPSSAGLEIYVMHI 533
            +D   +  GH +       H++S A +V+     +++ L  +  G  +   LEIY++H+
Sbjct: 242 GQDGDSEMAGHEE-------HNNSEANLVLATTNGKEEPLKRDTSGFLNPKSLEIYLLHL 294

Query: 534 FHKNSVVRLKEKK---IXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLV 701
           FH+N + +++EK    +               CG LSHFC T+AH+ +S KV  E+E +V
Sbjct: 295 FHENILSKVREKYRNIVRYQSPAQTAESAGEDCGLLSHFCMTVAHKTYSKKVQLELESVV 354

Query: 702 SRIPFVQLLSHPPW 743
           SR+P++QL S P W
Sbjct: 355 SRVPYLQLRSLPTW 368


>gb|EMJ05807.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score =  153 bits (386), Expect = 7e-35
 Identities = 87/247 (35%), Positives = 138/247 (55%)
 Frame = +3

Query: 3   LLAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVK 182
           +LAI  P  S++ +   +  +D      +S +  I  S E      KE+++D++    VK
Sbjct: 218 MLAINLPPNSYRSLQFGFLGADPGVSPIESSQTKIRLSSEA----EKESVSDDEC---VK 270

Query: 183 DTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPF 362
           +THS+L E+HQ+IF +QVFD V  E+++ S G+NVTG++E++LQL +GQ T++++SLVP 
Sbjct: 271 ETHSLLREVHQAIFDEQVFDLVNREAFNQSLGVNVTGIQENYLQLNIGQGTSVFISLVPS 330

Query: 363 KKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFHK 542
           + E + +DS           P      L +  +K    +    +P     EIY+  IFH+
Sbjct: 331 RGE-QTVDSPSTQNLENTILPLDTLDGLELAEDKPDTVKKTSLIPDQISCEIYLQQIFHQ 389

Query: 543 NSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPFVQ 722
           +  V+ K++                   L HFC ++AHRIFSNKVL E+E +V  +P++Q
Sbjct: 390 HVFVKAKDRPTSAGARVSGQLAKEGPGLLGHFCMSLAHRIFSNKVLKELENVVKGVPYLQ 449

Query: 723 LLSHPPW 743
           LLSHP W
Sbjct: 450 LLSHPTW 456


>gb|EOY31012.1| RNA polymerase II transcription mediators isoform 4 [Theobroma
           cacao]
          Length = 556

 Score =  152 bits (385), Expect = 9e-35
 Identities = 89/251 (35%), Positives = 148/251 (58%), Gaps = 4/251 (1%)
 Frame = +3

Query: 3   LLAIQRPQKSHQCISISYSASDFNSRN--KKSLKRNIYKS-DEILQANRKETLTDEDVNS 173
           +LAI  P  S+ C S+ +     +S +  K+S K   + S D+  + ++KE+++D++   
Sbjct: 111 MLAINLP--SNSCHSLHFGFLGVHSADIPKESSKIKTHGSVDQTTRDSQKESMSDDES-- 166

Query: 174 WVKDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSL 353
            VK+TH +L E+HQSIF  QVFD V  E+++ S G+NVTG+RE++LQL++GQ T++++SL
Sbjct: 167 -VKETHLLLREVHQSIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSIGQGTSLFISL 225

Query: 354 VPFKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINE-KDVLNENNFGVPSSAGLEIYVMH 530
           VP  K D+      ++QN  +     DS   V   E K  + E  +G P+    EIY+  
Sbjct: 226 VPSSKGDDQAVDTANAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQ 285

Query: 531 IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRI 710
           I H+++ ++ K++                   L HF  ++AHRIFSN+VL ++E +V R+
Sbjct: 286 IVHEHAFIKGKDRPNSSGTRVSGQSGKVGSGLLGHFSLSLAHRIFSNRVLMKLENVVCRV 345

Query: 711 PFVQLLSHPPW 743
           P++ L++HP W
Sbjct: 346 PYLHLMTHPTW 356


>gb|EOY31009.1| RNA polymerase II transcription mediators isoform 1 [Theobroma
           cacao] gi|508783754|gb|EOY31010.1| RNA polymerase II
           transcription mediators isoform 1 [Theobroma cacao]
          Length = 663

 Score =  152 bits (385), Expect = 9e-35
 Identities = 89/251 (35%), Positives = 148/251 (58%), Gaps = 4/251 (1%)
 Frame = +3

Query: 3   LLAIQRPQKSHQCISISYSASDFNSRN--KKSLKRNIYKS-DEILQANRKETLTDEDVNS 173
           +LAI  P  S+ C S+ +     +S +  K+S K   + S D+  + ++KE+++D++   
Sbjct: 218 MLAINLP--SNSCHSLHFGFLGVHSADIPKESSKIKTHGSVDQTTRDSQKESMSDDES-- 273

Query: 174 WVKDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSL 353
            VK+TH +L E+HQSIF  QVFD V  E+++ S G+NVTG+RE++LQL++GQ T++++SL
Sbjct: 274 -VKETHLLLREVHQSIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSIGQGTSLFISL 332

Query: 354 VPFKKEDEFLDSMGHSQNTTNEHPHSDSSALVVINE-KDVLNENNFGVPSSAGLEIYVMH 530
           VP  K D+      ++QN  +     DS   V   E K  + E  +G P+    EIY+  
Sbjct: 333 VPSSKGDDQAVDTANAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQ 392

Query: 531 IFHKNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRI 710
           I H+++ ++ K++                   L HF  ++AHRIFSN+VL ++E +V R+
Sbjct: 393 IVHEHAFIKGKDRPNSSGTRVSGQSGKVGSGLLGHFSLSLAHRIFSNRVLMKLENVVCRV 452

Query: 711 PFVQLLSHPPW 743
           P++ L++HP W
Sbjct: 453 PYLHLMTHPTW 463


>gb|EMT20869.1| hypothetical protein F775_22791 [Aegilops tauschii]
          Length = 549

 Score =  152 bits (383), Expect = 1e-34
 Identities = 92/252 (36%), Positives = 138/252 (54%), Gaps = 5/252 (1%)
 Frame = +3

Query: 3   LLAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVK 182
           +L++  PQKS + +S+ +     +     + K     S     A   +   ++DVN  VK
Sbjct: 95  ILSVHVPQKSCRFLSVQFLGDSASGAEGYASKAKGISSTTS-SAAEDDASENDDVNKSVK 153

Query: 183 DTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPF 362
             HS+   IH+SIF +QVFD V  E++  + GINVTGMREDFLQLA+GQ++ + LSL   
Sbjct: 154 QAHSIFRNIHKSIFEEQVFDMVIRETFVQTQGINVTGMREDFLQLAIGQESLLCLSLA-I 212

Query: 363 KKEDEFLDSMGHSQNTTNEHPHSDSSALVVINEK-DVLNENNFGVPSSAGLEIYVMHIFH 539
             +D   + +GH ++T +E     +  L   N K + L     G  S   LEIY++H+FH
Sbjct: 213 SGQDSDSEMVGHEEHTNSE----ANLVLATTNGKQEPLKSGASGFLSPKSLEIYLLHMFH 268

Query: 540 KNSVVRLKEKK---IXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSR 707
            N + ++++K    +               CG L HFC T+AH+IFSNKV  E+E +VSR
Sbjct: 269 DNILKKVRDKYRNIVRYQSPAHTAEPAGDECGLLGHFCMTVAHKIFSNKVQLELESVVSR 328

Query: 708 IPFVQLLSHPPW 743
           +P++ L S P W
Sbjct: 329 VPYLHLQSLPTW 340


>gb|EMT09196.1| hypothetical protein F775_08586 [Aegilops tauschii]
          Length = 668

 Score =  150 bits (380), Expect = 3e-34
 Identities = 91/254 (35%), Positives = 141/254 (55%), Gaps = 8/254 (3%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L++Q PQK+ + +S+ +     N     +  R    S     A   + L ++DVN  VK 
Sbjct: 223 LSVQVPQKACRFLSLQFRRDSANGPESYAC-RTKGVSSTTSSAAEDDALEEDDVNKSVKQ 281

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L  IH+SIF +QV D V  E++  + G+NVTGMREDFLQLA+G+++ + LSLV   
Sbjct: 282 AHSILRNIHKSIFEEQVLDMVIRETFVQTQGVNVTGMREDFLQLAIGEESLLCLSLV--- 338

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSSALVVI----NEKDVLNENNFGVPSSAGLEIYVMHI 533
                 DS   S +    H H++S A +V+     +++ L  +  G  +   LEIY++H+
Sbjct: 339 ------DSGQDSDSEMAGHEHNNSEANLVLATTNGKQEPLKRDTSGFLNPKSLEIYLLHL 392

Query: 534 FHKNSVVRLKEKK---IXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLV 701
           FH+N + +++EK    +                G LSHFC T+AH+ +S KV  E+E +V
Sbjct: 393 FHENILRKVREKYRNIVRYQSPAQTAESAGEDSGLLSHFCMTVAHKTYSKKVQLELESVV 452

Query: 702 SRIPFVQLLSHPPW 743
           SR+P++QL S P W
Sbjct: 453 SRVPYLQLRSLPTW 466


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  150 bits (380), Expect = 3e-34
 Identities = 87/248 (35%), Positives = 143/248 (57%), Gaps = 1/248 (0%)
 Frame = +3

Query: 3   LLAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVK 182
           +LAI  P KS++ +   + ++  +    +S K     S +      KE+++D++    VK
Sbjct: 219 MLAINLPPKSYRSLRFGFISAYTDDTPTESSKTKTQSSSDA----DKESVSDDEC---VK 271

Query: 183 DTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPF 362
           +THS+L E+HQ+IF +QVFD V  E+ + S G+NVTG++E++LQL + QDT++++SLVP 
Sbjct: 272 ETHSLLREVHQAIFSEQVFDLVNREACNQSLGVNVTGIQENYLQLNIDQDTSVFISLVPT 331

Query: 363 KKEDEFLDSMGHSQNTTNE-HPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFH 539
            + +E +DS   +QN  N   P      L +  +K    +    +P+    EIY++ IFH
Sbjct: 332 NQGEETVDSPS-TQNLENAILPLDTLDGLNLPEDKPDTPKKKSIIPNQISCEIYLLQIFH 390

Query: 540 KNSVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPFV 719
           ++  ++ K++                   L HFC ++AHRIFSNKVL E+E +V  +P++
Sbjct: 391 QHVFLKAKDRPTSGGGVSGQPAKEGSGL-LGHFCMSLAHRIFSNKVLMELENVVRGVPYM 449

Query: 720 QLLSHPPW 743
           QL SHP W
Sbjct: 450 QLTSHPTW 457


>dbj|BAK07358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 474

 Score =  147 bits (371), Expect = 4e-33
 Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 8/212 (3%)
 Frame = +3

Query: 132 ANRKETLTDEDVNSWVKDTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFL 311
           A   + L D+DVN  VK  HS+L  IH+SIF +QV D V  E++  + G+NVTGMREDFL
Sbjct: 69  AAEDDALEDDDVNKSVKQAHSILRNIHKSIFEEQVLDMVIRETFVQTQGVNVTGMREDFL 128

Query: 312 QLAVGQDTTIYLSLVPFKKEDEFLDSMGHSQNTTNEHPHSDSSALVVI----NEKDVLNE 479
           QLA+G+++ + LSLV    +D   +  GH +       H++S A +V+     +++ L  
Sbjct: 129 QLAIGEESLLCLSLVN-SGQDSDSEIAGHEE-------HNNSEANLVLATTNGKQEPLKM 180

Query: 480 NNFGVPSSAGLEIYVMHIFHKNSVVRLKEKK---IXXXXXXXXXXXXXXXCG-LSHFCKT 647
           +  G  +   LEIY++H+FH+N + +++EK    +               CG LSHFC T
Sbjct: 181 DTSGFLNPKSLEIYLLHLFHENILRKVREKYRNIVRYQSPAQTAESAGEDCGLLSHFCMT 240

Query: 648 IAHRIFSNKVLAEIERLVSRIPFVQLLSHPPW 743
           +AH+ FS KV  E+E +VSR+P++QL S P W
Sbjct: 241 VAHKTFSKKVQLELESVVSRVPYLQLRSLPTW 272


>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
           gi|557554196|gb|ESR64210.1| hypothetical protein
           CICLE_v10007689mg [Citrus clementina]
          Length = 657

 Score =  144 bits (362), Expect = 4e-32
 Identities = 83/246 (33%), Positives = 125/246 (50%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L +Q    S QC  +  S S   S+  K                  E++ D++    V++
Sbjct: 240 LGVQSGDSSKQCSKVKNSCSPRPSKEAK------------------ESVNDDEC---VRE 278

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L E+HQ+IF +QVFD V  E++  S G+NVTG+RE++LQL +G   +I+LSL+P  
Sbjct: 279 KHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSN 338

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFHKN 545
           + D  +DS  +    +   P      + +  EKD +   + G P+    EIY+  +FH+ 
Sbjct: 339 QGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEY 398

Query: 546 SVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPFVQL 725
              R K K I                 L HFC ++AHRIFSNKV  E+E  V  +P++ L
Sbjct: 399 LYGRAKNKPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVRVELENAVCGVPYLHL 458

Query: 726 LSHPPW 743
           +SHP W
Sbjct: 459 VSHPTW 464


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Citrus sinensis]
          Length = 657

 Score =  143 bits (361), Expect = 5e-32
 Identities = 83/246 (33%), Positives = 125/246 (50%)
 Frame = +3

Query: 6   LAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVKD 185
           L +Q    S QC  +  S S   S+  K                  E++ D++    V++
Sbjct: 240 LGVQSGDSSKQCSKVKNSCSPRPSKEAK------------------ESVNDDEC---VRE 278

Query: 186 THSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPFK 365
            HS+L E+HQ+IF +QVFD V  E++  S G+NVTG+RE++LQL +G   +I+LSL+P  
Sbjct: 279 KHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSN 338

Query: 366 KEDEFLDSMGHSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIFHKN 545
           + D  +DS  +    +   P      + +  EKD +   + G P+    EIY+  +FH+ 
Sbjct: 339 QGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEY 398

Query: 546 SVVRLKEKKIXXXXXXXXXXXXXXXCGLSHFCKTIAHRIFSNKVLAEIERLVSRIPFVQL 725
              R K K I                 L HFC ++AHRIFSNKV  E+E  V  +P++ L
Sbjct: 399 LYGRAKNKPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHL 458

Query: 726 LSHPPW 743
           +SHP W
Sbjct: 459 VSHPTW 464


>ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Solanum tuberosum]
          Length = 663

 Score =  142 bits (359), Expect = 9e-32
 Identities = 82/250 (32%), Positives = 137/250 (54%), Gaps = 3/250 (1%)
 Frame = +3

Query: 3   LLAIQRPQKSHQCISISYSASDFNSRNKKSLKRNIYKSDEILQANRKETLTDEDVNSWVK 182
           +LA+  P  S + +   +  +   S     +  +  K     + +  ET  ++  +  V+
Sbjct: 225 MLAVNLPPNSCRTLQFEFLGA---SAPSGVINHSRLKPKGSFEDSSGETKREKSDDEHVR 281

Query: 183 DTHSVLHEIHQSIFLQQVFDRVKHESYSPSPGINVTGMREDFLQLAVGQDTTIYLSLVPF 362
           +THS L E+H++IF +QVFD V  E+++P+ G +VTG++E+ L+L++GQ  ++ +SLVP 
Sbjct: 282 ETHSTLREVHRAIFDEQVFDLVNREAFNPALGADVTGIQENLLRLSIGQRASLSISLVPS 341

Query: 363 KKEDEFLDSMG--HSQNTTNEHPHSDSSALVVINEKDVLNENNFGVPSSAGLEIYVMHIF 536
             + +  +++G  HS+         D+S L    ++   N    G P+    EIY+  +F
Sbjct: 342 TDDGQTANAVGDEHSETAIVPFESVDASKL----DEGKFNFKKLGFPNRISFEIYLQQLF 397

Query: 537 HKNSVVRLKEKKIXXXXXXXXXXXXXXXCG-LSHFCKTIAHRIFSNKVLAEIERLVSRIP 713
           H++  ++ K +                    L HFC ++AHRIFSNKVLAE+E LVSRIP
Sbjct: 398 HEHVFIKAKNRLSSLGKPQLSSQPVKDGPNLLGHFCVSLAHRIFSNKVLAELESLVSRIP 457

Query: 714 FVQLLSHPPW 743
           +VQL+SHP W
Sbjct: 458 YVQLISHPTW 467