BLASTX nr result
ID: Zingiber24_contig00011685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00011685
(413 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD01767.1| RNA helicase-like [Oryza sativa Japonica Group] 135 6e-30
gb|EEC83399.1| hypothetical protein OsI_28838 [Oryza sativa Indi... 135 6e-30
ref|XP_006659312.1| PREDICTED: putative pre-mRNA-splicing factor... 135 7e-30
ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [S... 132 5e-29
ref|XP_002453971.1| hypothetical protein SORBIDRAFT_04g022460 [S... 131 8e-29
ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor... 131 1e-28
ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor... 123 3e-26
emb|CBI15151.3| unnamed protein product [Vitis vinifera] 122 4e-26
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 122 4e-26
gb|EMS57677.1| Putative pre-mRNA-splicing factor ATP-dependent R... 121 1e-25
gb|EMT00349.1| Putative pre-mRNA-splicing factor ATP-dependent R... 120 2e-25
ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor... 120 2e-25
gb|EMJ12108.1| hypothetical protein PRUPE_ppa000714mg [Prunus pe... 120 2e-25
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu... 117 1e-24
gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent R... 116 3e-24
gb|EPS68969.1| hypothetical protein M569_05799, partial [Genlise... 116 3e-24
ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [A... 115 8e-24
gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus pe... 114 1e-23
dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare] 114 1e-23
ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor... 112 5e-23
>dbj|BAD01767.1| RNA helicase-like [Oryza sativa Japonica Group]
Length = 1066
Score = 135 bits (340), Expect = 6e-30
Identities = 68/99 (68%), Positives = 80/99 (80%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+SL+GYSKSV VQYVIRL+KE SS DLV KLVEFGF+SS ETRS
Sbjct: 1 MASDGQLRDWVSDKLMSLLGYSKSVVVQYVIRLAKECSSTGDLVGKLVEFGFTSSAETRS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP K +G SNYQ+ E+EA++ KKQ YKLL
Sbjct: 61 FAADIYAKVPRKASGISNYQKQEREAAKLVKKQSTYKLL 99
>gb|EEC83399.1| hypothetical protein OsI_28838 [Oryza sativa Indica Group]
gi|222640378|gb|EEE68510.1| hypothetical protein
OsJ_26936 [Oryza sativa Japonica Group]
Length = 1046
Score = 135 bits (340), Expect = 6e-30
Identities = 68/99 (68%), Positives = 80/99 (80%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+SL+GYSKSV VQYVIRL+KE SS DLV KLVEFGF+SS ETRS
Sbjct: 1 MASDGQLRDWVSDKLMSLLGYSKSVVVQYVIRLAKECSSTGDLVGKLVEFGFTSSAETRS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP K +G SNYQ+ E+EA++ KKQ YKLL
Sbjct: 61 FAADIYAKVPRKASGISNYQKQEREAAKLVKKQSTYKLL 99
>ref|XP_006659312.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Oryza brachyantha]
Length = 1052
Score = 135 bits (339), Expect = 7e-30
Identities = 68/99 (68%), Positives = 79/99 (79%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+SL+GYSKSV VQYVIRL+KE SS DLV KLVEFGFSSS ETRS
Sbjct: 1 MASDGQLRDWVSDKLMSLLGYSKSVVVQYVIRLAKECSSTGDLVGKLVEFGFSSSAETRS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+Y KVP K +G SNYQ+ E+EA++ KKQ YKLL
Sbjct: 61 FAADIYGKVPRKASGISNYQKQEREAAKLVKKQSTYKLL 99
>ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [Sorghum bicolor]
gi|241929596|gb|EES02741.1| hypothetical protein
SORBIDRAFT_03g010540 [Sorghum bicolor]
Length = 1046
Score = 132 bits (332), Expect = 5e-29
Identities = 65/99 (65%), Positives = 81/99 (81%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+SL+GYSK+V VQYVIRL+KE SS DLV KLVEFGF+SS ETR+
Sbjct: 1 MATDGQLREWVSDKLMSLLGYSKNVVVQYVIRLAKECSSTGDLVGKLVEFGFTSSAETRA 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP + +G SNYQ+ E+EA++ A+KQ YKLL
Sbjct: 61 FASDVYAKVPRRASGISNYQKQEREAAKLAQKQSTYKLL 99
>ref|XP_002453971.1| hypothetical protein SORBIDRAFT_04g022460 [Sorghum bicolor]
gi|241933802|gb|EES06947.1| hypothetical protein
SORBIDRAFT_04g022460 [Sorghum bicolor]
Length = 1088
Score = 131 bits (330), Expect = 8e-29
Identities = 64/99 (64%), Positives = 80/99 (80%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+SL+GYSK+V VQYVIRL+KE SS DLV KLVEFGF+SS ETR+
Sbjct: 1 MASDGQLREWVSDKLMSLLGYSKNVVVQYVIRLAKECSSTGDLVSKLVEFGFTSSAETRT 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP + +G SNYQ+ E+EA++ +KQ YKLL
Sbjct: 61 FASDVYAKVPRRASGISNYQKQEREAAKLVQKQSTYKLL 99
>ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Setaria italica]
Length = 1051
Score = 131 bits (329), Expect = 1e-28
Identities = 64/99 (64%), Positives = 81/99 (81%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ W+SDKL+SL+GYSKSV VQYVIRL+KE SS +DLV KLVEFGF+SS ETR+
Sbjct: 1 MASDGQLREWISDKLMSLLGYSKSVIVQYVIRLAKECSSTSDLVGKLVEFGFTSSAETRT 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP + +G SNYQ+ E+EA++ +KQ YKLL
Sbjct: 61 FAADIYAKVPRRASGISNYQKQEREAAKLVQKQSTYKLL 99
>ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Brachypodium distachyon]
Length = 1051
Score = 123 bits (308), Expect = 3e-26
Identities = 62/99 (62%), Positives = 76/99 (76%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+SL G++ +V VQYVIRL+KE SS DLV KLVE+GFSSS ET S
Sbjct: 1 MASDRQLRDWVSDKLMSLQGFTTTVVVQYVIRLAKECSSTGDLVGKLVEYGFSSSAETSS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP + G SNYQ+ E+EA++ KKQ YKLL
Sbjct: 61 FAADIYAKVPRRDRGISNYQKQEREAAKLVKKQSTYKLL 99
>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
Length = 954
Score = 122 bits (307), Expect = 4e-26
Identities = 57/99 (57%), Positives = 80/99 (80%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
M ES LK WVSDKL+SL+GYS+ VQYV+ L+K++SSPAD+V KLVEFG S+S+ETRS
Sbjct: 1 MGSESNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA+++++KVPHK +G + YQ+ E+EA+ +KQ+ Y +L
Sbjct: 61 FAEEIFSKVPHKASGLNVYQKQEREAAMLVRKQKTYAIL 99
>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Vitis vinifera]
Length = 1056
Score = 122 bits (307), Expect = 4e-26
Identities = 57/99 (57%), Positives = 80/99 (80%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
M ES LK WVSDKL+SL+GYS+ VQYV+ L+K++SSPAD+V KLVEFG S+S+ETRS
Sbjct: 1 MGSESNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA+++++KVPHK +G + YQ+ E+EA+ +KQ+ Y +L
Sbjct: 61 FAEEIFSKVPHKASGLNVYQKQEREAAMLVRKQKTYAIL 99
>gb|EMS57677.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Triticum urartu]
Length = 954
Score = 121 bits (303), Expect = 1e-25
Identities = 62/99 (62%), Positives = 75/99 (75%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+S+ G+S SV V YVI L+K+SSS DLV KLVE+GFSSS ET S
Sbjct: 1 MASDKQLRDWVSDKLMSIQGFSTSVLVHYVIGLAKDSSSAGDLVGKLVEYGFSSSAETSS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP K G SNYQ+ E+EA++ KKQ YKLL
Sbjct: 61 FAADIYAKVPRKGRGISNYQKQEREAAKLVKKQSTYKLL 99
>gb|EMT00349.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Aegilops tauschii]
Length = 1041
Score = 120 bits (300), Expect = 2e-25
Identities = 61/99 (61%), Positives = 75/99 (75%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+S+ G+S SV V YVI L+K+SSS DLV KLVE+GFSSS ET S
Sbjct: 1 MASDKQLRDWVSDKLMSIQGFSTSVLVHYVIGLAKDSSSAGDLVGKLVEYGFSSSAETSS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP K G SNYQ+ E+EA++ +KQ YKLL
Sbjct: 61 FAADIYAKVPRKGRGVSNYQKQEREAAKLVQKQSTYKLL 99
>ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Fragaria vesca subsp. vesca]
Length = 1042
Score = 120 bits (300), Expect = 2e-25
Identities = 53/99 (53%), Positives = 80/99 (80%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
M ES LKTWVSDKL++L+GYS+ VQY+I +SK++ SPA++V KLV+ G++SS++TR
Sbjct: 1 MGSESNLKTWVSDKLMTLLGYSQPAVVQYIIGISKQAKSPAEVVVKLVDSGWTSSSDTRK 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA ++++KVPHK +GP++YQ+ E+EA+ +KQ+ Y LL
Sbjct: 61 FAQEIFSKVPHKSSGPNDYQKQEREAAMLVRKQKTYALL 99
>gb|EMJ12108.1| hypothetical protein PRUPE_ppa000714mg [Prunus persica]
Length = 1026
Score = 120 bits (300), Expect = 2e-25
Identities = 56/99 (56%), Positives = 77/99 (77%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
M ES LKTWVSDKL++ +GYS+ VQY+I L+K++ SPAD+V KLVEFG SSS ET +
Sbjct: 1 MGSESNLKTWVSDKLMTFLGYSQPTVVQYIIGLTKQAKSPADVVGKLVEFGLSSSAETSA 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA+D++A+VP K++G + YQ+ E+EA+ KKQ+ Y LL
Sbjct: 61 FAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLL 99
>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 756
Score = 117 bits (294), Expect = 1e-24
Identities = 54/96 (56%), Positives = 79/96 (82%)
Frame = +2
Query: 98 ESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRSFAD 277
+S LKTWVSDKL+S++GYS+S VQY+I +SK+++SPAD+ KL EFGFS+S ETRSF++
Sbjct: 3 DSDLKTWVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEFGFSTSAETRSFSE 62
Query: 278 DMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
+++++VP KQ+G + YQ+ E+EA+ A+KQ Y LL
Sbjct: 63 ELFSRVPRKQSGLNIYQKQEREAAMLARKQLTYTLL 98
>gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Morus notabilis]
Length = 1043
Score = 116 bits (291), Expect = 3e-24
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + LKTWVSDKL+SL+GYS+S VQYVI LSK+++SPAD+V KL EFG SSS+ TR+
Sbjct: 1 MASDGNLKTWVSDKLMSLLGYSQSTLVQYVIGLSKQAASPADVVSKLEEFGVSSSSATRA 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRA 373
FA++++++VPHK +G ++YQ+ E+EA+ A+K A
Sbjct: 61 FAEEIFSRVPHKSSGLNSYQKQEREAAMIARKTYA 95
>gb|EPS68969.1| hypothetical protein M569_05799, partial [Genlisea aurea]
Length = 259
Score = 116 bits (291), Expect = 3e-24
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 101 SYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRSFADD 280
S LKTWVSDKL+SL+GYS+ VQYVI LSK++SSP+++V +LV+ G SSSTET FA +
Sbjct: 2 SDLKTWVSDKLMSLLGYSQPTVVQYVITLSKKASSPSEIVNQLVDLGISSSTETSIFAKE 61
Query: 281 MYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
++A+V HK +GP+ YQ+ E+EA+ A+KQ++YK+L
Sbjct: 62 IFARVEHKASGPNLYQKQEREAAVLAQKQKSYKIL 96
>ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [Amborella trichopoda]
gi|548839655|gb|ERM99915.1| hypothetical protein
AMTR_s00110p00073830 [Amborella trichopoda]
Length = 1044
Score = 115 bits (287), Expect = 8e-24
Identities = 55/99 (55%), Positives = 72/99 (72%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
M E L+TWVSDKL S++GYS+ V ++I L+K++SSPAD KL EFGF +S ET
Sbjct: 1 MGHEDNLRTWVSDKLYSVLGYSQPAVVSFIIGLAKKASSPADAASKLKEFGFPASAETHE 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA ++Y KVPHK AG ++YQ+AEKEA+ KKQ+ Y LL
Sbjct: 61 FAKEIYMKVPHKAAGLNSYQKAEKEAAMLVKKQQEYALL 99
>gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus persica]
Length = 1052
Score = 114 bits (286), Expect = 1e-23
Identities = 56/101 (55%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLV--EFGFSSSTET 262
M ES L TWVSDKL++L+GYS+ VQY+I L+K++ SPAD+V KLV EFG SSS ET
Sbjct: 1 MGSESNLNTWVSDKLMTLLGYSQPTVVQYIIGLTKQAKSPADVVGKLVELEFGLSSSAET 60
Query: 263 RSFADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
+FA+D++A+VP K++G + YQ+ E+EA+ KKQ+ Y LL
Sbjct: 61 SAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLL 101
>dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1046
Score = 114 bits (286), Expect = 1e-23
Identities = 58/99 (58%), Positives = 73/99 (73%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
MA + L+ WVSDKL+S+ G+S SV V YVI L+K+ SS DLV KLV++GFSSS ET S
Sbjct: 1 MASDKQLRDWVSDKLMSIQGFSTSVLVHYVIGLAKDCSSSGDLVGKLVDYGFSSSAETTS 60
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA D+YAKVP K SNYQ+ E++A++ KKQ YKLL
Sbjct: 61 FAADIYAKVPRKGKSISNYQKQERDAAKLVKKQSTYKLL 99
>ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [Glycine max]
Length = 1046
Score = 112 bits (280), Expect = 5e-23
Identities = 53/99 (53%), Positives = 77/99 (77%)
Frame = +2
Query: 89 MADESYLKTWVSDKLISLIGYSKSVAVQYVIRLSKESSSPADLVRKLVEFGFSSSTETRS 268
M + LKTWVSDKL+SL+GYS+ VQY+I LSK+++SPADLV KLVEFG SS +T +
Sbjct: 1 MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGI-SSMDTHA 59
Query: 269 FADDMYAKVPHKQAGPSNYQRAEKEASQYAKKQRAYKLL 385
FA+++Y++VP + +G + YQ+ E+EA+ A+KQ+ Y +L
Sbjct: 60 FAEEIYSRVPRRSSGINQYQKQEREAAMLARKQKTYSIL 98