BLASTX nr result

ID: Zingiber24_contig00011672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00011672
         (429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574262.1| PREDICTED: uncharacterized protein LOC100824...    47   4e-08

>ref|XP_003574262.1| PREDICTED: uncharacterized protein LOC100824718 isoform 2
           [Brachypodium distachyon]
          Length = 263

 Score = 47.0 bits (110), Expect(2) = 4e-08
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +3

Query: 195 LQMFINAFDKAADLDVLDHPIPNFIYYMV 281
           + M +NAFDKAADLDVL HPI NF YY++
Sbjct: 206 VMMCLNAFDKAADLDVLSHPILNFFYYLM 234



 Score = 35.8 bits (81), Expect(2) = 4e-08
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 125 KISLWLVLRRKPVLAMVIVAKIFFA 199
           +ISLWLVL  KPV  MVI++K+FFA
Sbjct: 157 QISLWLVLWWKPVRVMVILSKMFFA 181


Top