BLASTX nr result
ID: Zingiber24_contig00011473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00011473
(222 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group] g... 77 3e-12
gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Ja... 77 3e-12
gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indi... 77 3e-12
gb|ABG22554.1| RNA recognition motif family protein, expressed [... 77 3e-12
gb|EMJ03364.1| hypothetical protein PRUPE_ppa006419mg [Prunus pe... 72 1e-10
ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232... 72 1e-10
ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa... 72 1e-10
gb|EMS66825.1| Nucleolysin TIAR [Triticum urartu] 71 2e-10
ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodi... 71 2e-10
ref|XP_006474699.1| PREDICTED: nucleolysin TIAR-like isoform X2 ... 70 2e-10
ref|XP_006474698.1| PREDICTED: nucleolysin TIAR-like isoform X1 ... 70 2e-10
ref|XP_006452848.1| hypothetical protein CICLE_v10008437mg [Citr... 70 2e-10
ref|XP_006452847.1| hypothetical protein CICLE_v10008437mg [Citr... 70 2e-10
ref|XP_006452846.1| hypothetical protein CICLE_v10008437mg [Citr... 70 2e-10
ref|XP_006583169.1| PREDICTED: nucleolysin TIAR [Glycine max] 70 3e-10
gb|AFK42319.1| unknown [Lotus japonicus] 68 1e-09
emb|CBI35841.3| unnamed protein product [Vitis vinifera] 68 1e-09
ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera] 68 1e-09
emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera] 68 1e-09
ref|XP_006658813.1| PREDICTED: nucleolysin TIAR-like, partial [O... 67 2e-09
>ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa
Japonica Group] gi|215767783|dbj|BAH00012.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein
OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein
OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGT-XXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGT ATDL Y+RTLALSKM+AN
Sbjct: 343 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAAN 402
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 403 PALMSQHAALKQA 415
>gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Japonica Group]
Length = 522
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGT-XXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGT ATDL Y+RTLALSKM+AN
Sbjct: 424 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAAN 483
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 484 PALMSQHAALKQA 496
>gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indica Group]
Length = 391
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGT-XXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGT ATDL Y+RTLALSKM+AN
Sbjct: 293 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPTPFNPGMSATDLLAYERTLALSKMAAN 352
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 353 PALMSQHAALKQA 365
>gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGT-XXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGT ATDL Y+RTLALSKM+AN
Sbjct: 305 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAAN 364
Query: 40 QALMQGHLAMKQA 2
ALM H A+KQA
Sbjct: 365 PALMSQHAALKQA 377
>gb|EMJ03364.1| hypothetical protein PRUPE_ppa006419mg [Prunus persica]
Length = 413
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N + LCGKPIKCSWGSKPTPPGT A DL Y+R +ALSKM Q
Sbjct: 311 NARFLCGKPIKCSWGSKPTPPGTSSTPLPPPAAAQMPGFSAADLAAYERQMALSKMGGAQ 370
Query: 37 ALM--QGHLAMKQA 2
ALM QG A+K A
Sbjct: 371 ALMLPQGQHALKAA 384
>ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232331 [Cucumis sativus]
Length = 343
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/75 (52%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N +V+CGKPIKCSWGSKPTPPGT A DL Y+R +ALSKM A Q
Sbjct: 233 NARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYERQMALSKMGAAQ 292
Query: 37 ALMQ---GHLAMKQA 2
ALM A+KQA
Sbjct: 293 ALMHPQAAQHALKQA 307
>ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/75 (52%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N +V+CGKPIKCSWGSKPTPPGT A DL Y+R +ALSKM A Q
Sbjct: 310 NARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYERQMALSKMGAAQ 369
Query: 37 ALMQ---GHLAMKQA 2
ALM A+KQA
Sbjct: 370 ALMHPQAAQHALKQA 384
>gb|EMS66825.1| Nucleolysin TIAR [Triticum urartu]
Length = 396
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGT-XXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSAN 41
NGQ++ G+ IKCSWGSKPTPPGT A DL YDR+LALSKM+A+
Sbjct: 293 NGQLIGGRQIKCSWGSKPTPPGTASAPLPPPALAPYTPGVSAADLISYDRSLALSKMAAD 352
Query: 40 QALMQGHLAMKQA 2
ALM H A++QA
Sbjct: 353 PALMGQHAALRQA 365
>ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGT---XXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMS 47
NGQ++ G+ IKCSWGSKPTPPGT A DLF Y+R+LALSKM+
Sbjct: 341 NGQLVGGRQIKCSWGSKPTPPGTASAPLPPPALAVAPYTPGVSAADLFSYERSLALSKMA 400
Query: 46 ANQALMQGHLAMKQA 2
N ALM H A++QA
Sbjct: 401 GNPALMGQHAALRQA 415
>ref|XP_006474699.1| PREDICTED: nucleolysin TIAR-like isoform X2 [Citrus sinensis]
Length = 412
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT ATDL Y+R +ALSK++ Q
Sbjct: 311 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 370
Query: 37 ALM 29
ALM
Sbjct: 371 ALM 373
>ref|XP_006474698.1| PREDICTED: nucleolysin TIAR-like isoform X1 [Citrus sinensis]
Length = 413
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT ATDL Y+R +ALSK++ Q
Sbjct: 312 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 371
Query: 37 ALM 29
ALM
Sbjct: 372 ALM 374
>ref|XP_006452848.1| hypothetical protein CICLE_v10008437mg [Citrus clementina]
gi|557556074|gb|ESR66088.1| hypothetical protein
CICLE_v10008437mg [Citrus clementina]
Length = 417
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT ATDL Y+R +ALSK++ Q
Sbjct: 316 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 375
Query: 37 ALM 29
ALM
Sbjct: 376 ALM 378
>ref|XP_006452847.1| hypothetical protein CICLE_v10008437mg [Citrus clementina]
gi|557556073|gb|ESR66087.1| hypothetical protein
CICLE_v10008437mg [Citrus clementina]
Length = 413
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT ATDL Y+R +ALSK++ Q
Sbjct: 312 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 371
Query: 37 ALM 29
ALM
Sbjct: 372 ALM 374
>ref|XP_006452846.1| hypothetical protein CICLE_v10008437mg [Citrus clementina]
gi|557556072|gb|ESR66086.1| hypothetical protein
CICLE_v10008437mg [Citrus clementina]
Length = 412
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
N ++LCGKPIKCSWGSKPTPPGT ATDL Y+R +ALSK++ Q
Sbjct: 311 NARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ 370
Query: 37 ALM 29
ALM
Sbjct: 371 ALM 373
>ref|XP_006583169.1| PREDICTED: nucleolysin TIAR [Glycine max]
Length = 422
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/71 (53%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGT ATDL Y+R LA+SKM ALM
Sbjct: 325 LLCGKPIKCSWGSKPTPPGTASNPLPPPAAASLPGLSATDLLAYERQLAISKMGGVHALM 384
Query: 28 --QGHLAMKQA 2
QG +KQA
Sbjct: 385 HPQGQHHLKQA 395
>gb|AFK42319.1| unknown [Lotus japonicus]
Length = 103
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/71 (52%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQALM 29
+LCGK IKCSWGSKPTPPGT ATDL Y+R LA+SKM ALM
Sbjct: 7 ILCGKQIKCSWGSKPTPPGTASNPLPPPAPATLPGFSATDLLAYERQLAMSKMGGVHALM 66
Query: 28 --QGHLAMKQA 2
QG +KQA
Sbjct: 67 HPQGQHPLKQA 77
>emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/69 (50%), Positives = 39/69 (56%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGT ATDL Y+R LA+SKM
Sbjct: 308 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMGHALMHP 367
Query: 28 QGHLAMKQA 2
QG +KQA
Sbjct: 368 QGQHPLKQA 376
>ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/69 (50%), Positives = 39/69 (56%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGT ATDL Y+R LA+SKM
Sbjct: 321 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMGHALMHP 380
Query: 28 QGHLAMKQA 2
QG +KQA
Sbjct: 381 QGQHPLKQA 389
>emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/69 (50%), Positives = 39/69 (56%)
Frame = -3
Query: 208 VLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQALM 29
+LCGKPIKCSWGSKPTPPGT ATDL Y+R LA+SKM
Sbjct: 321 ILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMGHALMHP 380
Query: 28 QGHLAMKQA 2
QG +KQA
Sbjct: 381 QGQHPLKQA 389
>ref|XP_006658813.1| PREDICTED: nucleolysin TIAR-like, partial [Oryza brachyantha]
Length = 397
Score = 67.0 bits (162), Expect = 2e-09
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -3
Query: 217 NGQVLCGKPIKCSWGSKPTPPGTXXXXXXXXXXXXXXXXXATDLFGYDRTLALSKMSANQ 38
NG++L GKPIKCSWG+KPTPPGT A D+ Y RTLALSKM++ Q
Sbjct: 292 NGRILGGKPIKCSWGNKPTPPGT---TSAPLPPPAAPSLTAADILEYQRTLALSKMASTQ 348
Query: 37 ALMQ 26
ALMQ
Sbjct: 349 ALMQ 352